Computerized analysis of coronary artery disease: Performance evaluation of segmentation and tracking of coronary arteries in CT angiograms

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/134780/1/mp0294.pd

<i>Gaia</i> Data Release 1. Summary of the astrometric, photometric, and survey properties

Context. At about 1000 days after the launch of Gaia we present the first Gaia data release, Gaia DR1, consisting of astrometry and photometry for over 1 billion sources brighter than magnitude 20.7. Aims. A summary of Gaia DR1 is presented along with illustrations of the scientific quality of the data, followed by a discussion of the limitations due to the preliminary nature of this release. Methods. The raw data collected by Gaia during the first 14 months of the mission have been processed by the Gaia Data Processing and Analysis Consortium (DPAC) and turned into an astrometric and photometric catalogue. Results. Gaia DR1 consists of three components: a primary astrometric data set which contains the positions, parallaxes, and mean proper motions for about 2 million of the brightest stars in common with the HIPPARCOS and Tycho-2 catalogues – a realisation of the Tycho-Gaia Astrometric Solution (TGAS) – and a secondary astrometric data set containing the positions for an additional 1.1 billion sources. The second component is the photometric data set, consisting of mean G-band magnitudes for all sources. The G-band light curves and the characteristics of ∼3000 Cepheid and RR-Lyrae stars, observed at high cadence around the south ecliptic pole, form the third component. For the primary astrometric data set the typical uncertainty is about 0.3 mas for the positions and parallaxes, and about 1 mas yr−1 for the proper motions. A systematic component of ∼0.3 mas should be added to the parallax uncertainties. For the subset of ∼94 000 HIPPARCOS stars in the primary data set, the proper motions are much more precise at about 0.06 mas yr−1. For the secondary astrometric data set, the typical uncertainty of the positions is ∼10 mas. The median uncertainties on the mean G-band magnitudes range from the mmag level to ∼0.03 mag over the magnitude range 5 to 20.7. Conclusions. Gaia DR1 is an important milestone ahead of the next Gaia data release, which will feature five-parameter astrometry for all sources. Extensive validation shows that Gaia DR1 represents a major advance in the mapping of the heavens and the availability of basic stellar data that underpin observational astrophysics. Nevertheless, the very preliminary nature of this first Gaia data release does lead to a number of important limitations to the data quality which should be carefully considered before drawing conclusions from the data

Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data

First described from western Kansas, USA, the western corn rootworm, Diabrotica virgifera virgifera, is one of the worst pests of maize. The species is generally thought to be of Mexican origin and to have incidentally followed the expansion of maize cultivation into North America thousands of years ago. However, this hypothesis has never been investigated formally. In this study, the genetic variability of samples collected throughout North America was analysed at 13 microsatellite marker loci to explore precisely the population genetic structure and colonization history of D. v. virgifera. In particular, we used up-to-date approximate Bayesian computation methods based on random forest algorithms to test a Mexican versus a central-USA origin of the species, and to compare various possible timings of colonization. This analysis provided strong evidence that the origin of D. v. virgifera was southern (Mexico, or even further south). Surprisingly, we also found that the expansion of the species north of its origin was recent—probably not before 1100 years ago—thus indicating it was not directly associated with the early history of maize expansion out of Mexico, a far more ancient event

Gaia Data Release 1: Testing parallaxes with local Cepheids and RR Lyrae stars

Context. Parallaxes for 331 classical Cepheids, 31 Type II Cepheids, and 364 RR Lyrae stars in common between Gaia and the Hipparcos and Tycho-2 catalogues are published in Gaia Data Release 1 (DR1) as part of the Tycho-Gaia Astrometric Solution (TGAS). Aims. In order to test these first parallax measurements of the primary standard candles of the cosmological distance ladder, which involve astrometry collected by Gaia during the initial 14 months of science operation, we compared them with literature estimates and derived new period-luminosity (PL), period-Wesenheit (PW) relations for classical and Type II Cepheids and infrared PL, PL-metallicity (PLZ), and optical luminosity-metallicity (M V -[Fe/H]) relations for the RR Lyrae stars, with zero points based on TGAS. Methods. Classical Cepheids were carefully selected in order to discard known or suspected binary systems. The final sample comprises 102 fundamental mode pulsators with periods ranging from 1.68 to 51.66 days (of which 33 with σ Ω /Ω < 0.5). The Type II Cepheids include a total of 26 W Virginis and BL Herculis stars spanning the period range from 1.16 to 30.00 days (of which only 7 with σ Ω /Ω < 0.5). The RR Lyrae stars include 200 sources with pulsation period ranging from 0.27 to 0.80 days (of which 112 with σ Ω /Ω < 0.5). The new relations were computed using multi-band (V,I,J,K s ) photometry and spectroscopic metal abundances available in the literature, and by applying three alternative approaches: (i) linear least-squares fitting of the absolute magnitudes inferred from direct transformation of the TGAS parallaxes; (ii) adopting astrometry-based luminosities; and (iii) using a Bayesian fitting approach. The last two methods work in parallax space where parallaxes are used directly, thus maintaining symmetrical errors and allowing negative parallaxes to be used. The TGAS-based PL,PW,PLZ, and M V - [Fe/H] relations are discussed by comparing the distance to the Large Magellanic Cloud provided by different types of pulsating stars and alternative fitting methods. Results. Good agreement is found from direct comparison of the parallaxes of RR Lyrae stars for which both TGAS and HST measurements are available. Similarly, very good agreement is found between the TGAS values and the parallaxes inferred from the absolute magnitudes of Cepheids and RR Lyrae stars analysed with the Baade-Wesselink method. TGAS values also compare favourably with the parallaxes inferred by theoretical model fitting of the multi-band light curves for two of the three classical Cepheids and one RR Lyrae star, which were analysed with this technique in our samples. The K-band PL relations show the significant improvement of the TGAS parallaxes for Cepheids and RR Lyrae stars with respect to the Hipparcos measurements. This is particularly true for the RR Lyrae stars for which improvement in quality and statistics is impressive. Conclusions. TGAS parallaxes bring a significant added value to the previous Hipparcos estimates. The relations presented in this paper represent the first Gaia-calibrated relations and form a work-in-progress milestone report in the wait for Gaia-only parallaxes of which a first solution will become available with Gaia Data Release 2 (DR2) in 2018. © ESO, 2017

Gaia Data Release 1: Open cluster astrometry: performance, limitations, and future prospects

Context. The first Gaia Data Release contains the Tycho-Gaia Astrometric Solution (TGAS). This is a subset of about 2 million stars for which, besides the position and photometry, the proper motion and parallax are calculated using Hipparcos and Tycho-2 positions in 1991.25 as prior information.Aims. We investigate the scientific potential and limitations of the TGAS component by means of the astrometric data for open clusters.Methods. Mean cluster parallax and proper motion values are derived taking into account the error correlations within the astrometric solutions for individual stars, an estimate of the internal velocity dispersion in the cluster, and, where relevant, the effects of the depth of the cluster along the line of sight. Internal consistency of the TGAS data is assessed.Results. Values given for standard uncertainties are still inaccurate and may lead to unrealistic unit-weight standard deviations of least squares solutions for cluster parameters. Reconstructed mean cluster parallax and proper motion values are generally in very good agreement with earlier HIPPARCOS-based determination, although the Gaia mean parallax for the Pleiades is a significant exception. We have no current explanation for that discrepancy. Most clusters are observed to extend to nearly 15 pc from the cluster centre, and it will be up to future Gaia releases to establish whether those potential cluster-member stars are still dynamically bound to the clusters.Conclusions. The Gaia DR1 provides the means to examine open clusters far beyond their more easily visible cores, and can provide membership assessments based on proper motions and parallaxes. A combined HR diagram shows the same features as observed before using the HIPPARCOS data, with clearly increased luminosities for older A and F dwarfs

The XXL Survey . IV. Mass-temperature relation of the bright cluster sample

Part of the first data release of the XXL Survey. Associated data is accessible via CDS and via the XXL Database hosted at IASF-MIContext. The XXL Survey is the largest survey carried out by XMM-Newton. Covering an area of 50 deg2, the survey contains ~450 galaxy clusters out to a redshift ~2 and to an X-ray flux limit of ~ 5 × 10-15 erg s-1 cm-2. This paper is part of the first release of XXL results focussed on the bright cluster sample. Aims: We investigate the scaling relation between weak-lensing mass and X-ray temperature for the brightest clusters in XXL. The scaling relation discussed in this article is used to estimate the mass of all 100 clusters in XXL-100-GC. Methods: Based on a subsample of 38 objects that lie within the intersection of the northern XXL field and the publicly available CFHTLenS shear catalog, we derive the weak-lensing mass of each system with careful considerations of the systematics. The clusters lie at 0.1 Results: The mass-temperature relation fit (M ∝ Tb) to the XXL clusters returns a slope and intrinsic scatter σlnM|T≃ 0.53; the scatter is dominated by disturbed clusters. The fit to the combined sample of 96 clusters is in tension with self-similarity, b = 1.67 ± 0.12 and σlnM|T ≃ 0.41. Conclusions: Overall our results demonstrate the feasibility of ground-based weak-lensing scaling relation studies down to cool systems of ~1 keV temperature and highlight that the current data and samples are a limit to our statistical precision. As such we are unable to determine whether the validity of hydrostatic equilibrium is a function of halo mass. An enlarged sample of cool systems, deeper weak-lensing data, and robust modelling of the selection function will help to explore these issues further. Based on observations obtained with XMM-Newton, an ESA sci- ence mission with instruments and contributions directly funded by ESA Member States and NASA. Based on observations made with ESO Telescopes at the La Silla Paranal Observatory under programme 089.A-0666 and LP191.A-0268.The Master catalogue is available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/592/A

Cardiac Stress in High-Risk Patients Undergoing Major Endovascular Surgery—Focus on Diastolic Function

Objectives: The purpose of this study was to determine the relationship between the changes in diastolic function and their association with cardiac biomarkers in the perioperative period in patients undergoing complex endovascular aortic repair. Design: Prospective observational study. Setting: Single-center academic hospital, central teaching hospital in Warsaw, Poland. Participants: The study comprised 27 high-risk patients scheduled for elective endovascular repair of aortic aneurysm. Interventions: Complex endovascular procedure using branched endograft of the thoracoabdominal aorta. Branches of the stent grafts included renal arteries, the superior mesenteric artery, and the celiac trunk. Measurements and Main Results: The primary outcome was to evaluate changes in diastolic function parameters assessed with transthoracic echocardiography at two and 24 hours postoperatively. The major secondary outcomes were changes in N-terminal pro-B-type natriuretic peptide (NT-proBNP) and troponin I concentrations, systolic function parameters, hemodynamic parameters at two and 24 hours, length of hospital stay, and 30-day mortality. There was a reduction in e’ wave velocity on both the septal and lateral sides at two hours compared with the baseline (p = 0.041 and p = 0.05, respectively). There was an increase in both NT-proBNP and troponin I concentrations after surgery (p = 0.002 and p = 0.034, respectively), with troponin I peaking two hours after surgery and NT-proBNP peaking 24 hours after surgery. Conclusions: Patients undergoing a branched endovascular aortic repair of a thoracoabdominal aortic aneurysm experience a cardiac insult that manifests with deterioration in diastolic parameters and concomitant increases of troponin and NT-proBNP concentrations. Additional large-scale prospective studies are required to confirm this phenomenon

Natural Resources Research Institute Technical Report

The potential to develop a viable crayfish industry in Minnesota currently exists. Crayfish biomass in our inland lakes can greatly exceed that of fishes; existing harvest techniques appear to have very little impact on the year-to-year crayfish population. Thus, Minnesota's crayfish appear to be an abundant and resilient resource. There are markets for soft and hard shell crayfish for food, soft and hard shell crayfish for bait, and peeled tail meat. A Minnesota crayfish product could currently be inserted in any of these markets, but crayfish as a bait appears to be the most attractive market. There is a very high seasonal demand for bait crayfish and the wholesale prices can be in the range of $15 to$25 per lb for soft shells. In addition to bait markets, large hard shell crayfish for food have a strong international export market, but this market requires that sufficient quantities be shipped at the right times. Also, there is local interest in peeled tail meat for retail sale. We examined four widely distributed Orconectes species (O. virilis, O. propinquus, O. rusticus, O. immunis) to assess commercial soft shell production potential. Crayfish were held in production-sized shallow trays with 2 cm of water at constant temperature similar to that used for commercial soft shell production. Molting success was examined as a function of capture date, sex, and stage of maturity. The timing of life cycle events dictates to a large extent the availability and soft shell production potential of wild caught crayfish, particularly in northern latitudes where market-sized crayfish are often nonjuveniles. Adults typically molt two to three times per growing season, associated with reproductive cycles. Molting rate in the laboratory was highest when crayfish were captured just prior to the wild molt. The first molt of the season was much more synchronous than the second molt. Molt timing varied by sex. Premolt Orconectid crayfish did not change color like Procambarus sp. but could be identified by the decalcification of the cheliped merus. The harvest of several species may be required to optimize soft shell production since synchronous molts occur at different times for different species. Our economic assessment of the crayfish food market suggests that it is relatively flat. This is due to: continued high production costs (including the lack of a proven tail meat separator); regional consumption (primarily in the south-central and Pacific states); unsophisticated packaging and marketing; and seasonally available supply. Crayfish are used in much of the Midwest for fishing bait. Since it is illegal to sell live crayfish for bait in Minnesota, markets in other states will have to be targeted. Problems to overcome include reducing mortality of crayfish shipped to out-of-state markets and drops in sales when crayfish are available closer to the markets. We have analyzed the economic feasibility of food and bait soft shell crayfish production facilities using flow-through and recirculating systems for the first two years of operation. Bait crayfish production in a recirculating system appeared to be the most profitable operation and food crayfish production in a flow-through system appeared to be the least profitable operation. The processing of large quantities of crayfish for a commercial tail meat operation in Minnesota requires that an inexpensive, automated system be developed in order to maintain the product's economic viability. We have evaluated the necessary engineering design components for developing a relatively inexpensive automated crayfish processing system, which could be linked to extant tail meat extruders. We feel that such a system is feasible, and could cost less than $15,000 retail