Tunable plasmonic structures for terahertz frequencies

The terahertz frequency range is a relatively unstudied region of the electromagnetic spectrum. However with the emergence of numerous applications for terahertz light in diverse areas such as security scanning, biological imaging, gas spectroscopy and astrophysics there has been considerable recent growth in the volume of research activity in this area. The studies presented in this thesis aim to introduce the physics of surface plasmons to the terahertz frequency range, and on the way to use some of the unique capabilities of terahertz spectroscopy to try and find new information about fundamental surface-plasmon based electromagnetic structures. Four distinct experiments are described in this work, all of them underpinned by the technique of terahertz time-domain spectroscopy (Chapter 2). This is a very powerful and adaptable spectroscopic method which allows us to measure the electric field of pulsed terahertz radiation as a function of time. This in turn allows us to directly extract both phase and amplitude of the terahertz light as a function of frequency, over a broad frequency range. Furthermore, this method of terahertz spectroscopy can be combined with photoexcitation pulses of visible/NIR light which can be used to make dynamic changes to the properties of materials in the terahertz beam. The first experiment reported (Chapter 3) measures the propagation of coupled surface plasmons in a resonant slit cavity. We use terahertz time-domain spec- troscopy to determine the characteristics of the cavity resonances in a semiconductor slit near the surface plasma frequency of the material, where we are able to mea- sure very large red-shifts in the frequency of the cavity resonance. By considering the phase information which can be extracted directly from time-resolved terahertz measurements we are able to link the behaviour of the resonances to the propagation characteristics of the surface plasmon modes inside the slits. The second experiment (Chapter 4) is a more direct measurement of surface plasmons, propagated over the surface of a semiconductor wafer. We show that the electric field of the surface plasmon is confined to a subwavelength region around the surface, and that the confined field is useful for spectroscopy of very thin layers above the surface. We are able to measure films with thickness less than 1/600th of the wavelength of the terahertz light. After these two experiments with confined semiconductor surface plasmons we move on to a pair of experiments looking at terahertz surface modes mediating the transmission of light through holes in metal films. In the initial experiment (Chapter 5) we use the time-domain data from terahertz spectroscopy to determine the role that surface mode lifetime plays in modifying the amplitude and width of Extraor- dinary Optical Transmission (EOT) resonances, which arise from the periodicity of a hole-array lattice. By changing the temperature of the lossy dielectric semicon- ductor substrate we are able to modify the surface mode lifetime, and link this to the resonant transmission characteristics. In Chapter 6 we extend the hole array EOT experiment by making dynamic changes to the propagation of the surface mode which mediates the transmission. This is achieved by photo-exciting the semiconductor substrate inside the holes and forming a thin layer of material with high charge carrier density on the surface. Interaction of the surface mode with the photoexcited region quenches the resonant transmission. We show that by changing the hole size so that the surface-mode mediated transmission pathway predominates in the spectrum it is possible to use optical pulses to modulate the transmission of terahertz radiation with very high efficiency. In the conclusions (Chapter 7) we link together some of the insights and infer- ences which can be drawn from the above results, as well as evaluating the efficacy of the experimental and simulation methodology

Surface plasmon mediated transmission of subwavelength slits at THz frequencies

T. H. Isaac, J. Gómez Rivas, J. Roy Sambles, William L. Barnes, and Euan Hendry, Physical Review B, Vol. 77, article 113411 (2008). "Copyright © 2008 by the American Physical Society."We present measurements and a numerical modeling that elucidate the role of surface plasmons in the resonant transmission of a subwavelength slit in a conducting material. By using THz time domain spectroscopy, we determine the Fabry–Pérot transmission resonances for a single slit formed from a wafer of a semiconductor with a surface plasma frequency in the THz frequency range. We measure large redshifts in the resonant frequencies close to the surface plasma frequency, which are 50% lower than the resonance frequencies expected well below the surface plasma frequency. This is an effect attributed to the coupling of plasmons on the adjacent surfaces of the slit

<em>Tendril-less</em> regulates tendril formation in pea leaves

Tendrils are contact-sensitive, filamentous organs that permit climbing plants to tether to their taller neighbors. Tendrilled legume species are grown as field crops, where the tendrils contribute to the physical support of the crop prior to harvest. The homeotic tendril-less (tl) mutation in garden pea (Pisum sativum), identified almost a century ago, transforms tendrils into leaflets. In this study, we used a systematic marker screen of fast neutron–generated tl deletion mutants to identify Tl as a Class I homeodomain leucine zipper (HDZIP) transcription factor. We confirmed the tendril-less phenotype as loss of function by targeting induced local lesions in genomes (TILLING) in garden pea and by analysis of the tendril-less phenotype of the t mutant in sweet pea (Lathyrus odoratus). The conversion of tendrils into leaflets in both mutants demonstrates that the pea tendril is a modified leaflet, inhibited from completing laminar development by Tl. We provide evidence to show that lamina inhibition requires Unifoliata/LEAFY-mediated Tl expression in organs emerging in the distal region of the leaf primordium. Phylogenetic analyses show that Tl is an unusual Class I HDZIP protein and that tendrils evolved either once or twice in Papilionoid legumes. We suggest that tendrils arose in the Fabeae clade of Papilionoid legumes through acquisition of the Tl gene

From fat droplets to floating forests: cross-domain transfer learning using a PatchGAN-based segmentation model

Many scientific domains gather sufficient labels to train machine algorithms through human-in-the-loop techniques provided by the Zooniverse.org citizen science platform. As the range of projects, task types and data rates increase, acceleration of model training is of paramount concern to focus volunteer effort where most needed. The application of Transfer Learning (TL) between Zooniverse projects holds promise as a solution. However, understanding the effectiveness of TL approaches that pretrain on large-scale generic image sets vs. images with similar characteristics possibly from similar tasks is an open challenge. We apply a generative segmentation model on two Zooniverse project-based data sets: (1) to identify fat droplets in liver cells (FatChecker; FC) and (2) the identification of kelp beds in satellite images (Floating Forests; FF) through transfer learning from the first project. We compare and contrast its performance with a TL model based on the COCO image set, and subsequently with baseline counterparts. We find that both the FC and COCO TL models perform better than the baseline cases when using >75% of the original training sample size. The COCO-based TL model generally performs better than the FC-based one, likely due to its generalized features. Our investigations provide important insights into usage of TL approaches on multi-domain data hosted across different Zooniverse projects, enabling future projects to accelerate task completion.Comment: 5 pages, 4 figures, accepted for publication at the Proceedings of the ACM/CIKM 2022 (Human-in-the-loop Data Curation Workshop

Genotype-Informed Versus Empiric Management Of VirEmia (GIVE MOVE): study protocol of an open-label randomised clinical trial in children and adolescents living with HIV in Lesotho and Tanzania

Globally, the majority of people living with HIV have no or only limited access to HIV drug resistance testing to guide the selection of antiretroviral drugs. This is of particular concern for children and adolescents, who experience high rates of treatment failure. The GIVE MOVE trial assesses the clinical impact and cost-effectiveness of routinely providing genotypic resistance testing (GRT) to children and adolescents living with HIV who have an unsuppressed viral load (VL) while taking antiretroviral therapy (ART).; GIVE MOVE is an open-label randomised clinical trial enrolling children and adolescents (≥6 months to <19 years) living with HIV with a VL ≥400 copies/mL (c/mL) while taking first-line ART. Recruitment takes place at sites in Lesotho and Tanzania. Participants are randomised in a 1:1 allocation to a control arm receiving the standard of care (3 sessions of enhanced adherence counselling, a follow-up VL test, continuation of the same regimen upon viral resuppression or empiric selection of a new regimen upon sustained elevated viremia) and an intervention arm (GRT to inform onward treatment). The composite primary endpoint is the occurrence of any one or more of the following events during the 36 weeks of follow-up period: i) death due to any cause; ii) HIV- or ART-related hospital admission of ≥24 h duration; iii) new clinical World Health Organisation stage 4 event (excluding lymph node tuberculosis, stunting, oral or genital herpes simplex infection and oesophageal candidiasis); and iv) no documented VL <50 c/mL at 36 weeks follow-up. Secondary and exploratory endpoints assess additional health-related outcomes, and a nested study will assess the cost-effectiveness of the intervention. Enrolment of a total of 276 participants is planned, with an interim analysis scheduled after the first 138 participants have completed follow-up.; This randomised clinical trial will assess if the availability of resistance testing improves clinical outcomes in children and adolescents with elevated viremia while taking ART.; This trial is registered with ClinicalTrials.gov ( NCT04233242 ; registered 18.01.2020). More information: www.givemove.org

Writing in Britain and Ireland, c. 400 to c. 800

No abstract available

The Early Royal Society and Visual Culture

Recent studies have fruitfully examined the intersection between early modern science and visual culture by elucidating the functions of images in shaping and disseminating scientific knowledge. Given its rich archival sources, it is possible to extend this line of research in the case of the Royal Society to an examination of attitudes towards images as artefacts –manufactured objects worth commissioning, collecting and studying. Drawing on existing scholarship and material from the Royal Society Archives, I discuss Fellows’ interests in prints, drawings, varnishes, colorants, images made out of unusual materials, and methods of identifying the painter from a painting. Knowledge of production processes of images was important to members of the Royal Society, not only as connoisseurs and collectors, but also as those interested in a Baconian mastery of material processes, including a “history of trades”. Their antiquarian interests led to discussion of painters’ styles, and they gradually developed a visual memorial to an institution through portraits and other visual records.AH/M001938/1 (AHRC

Antimicrobial resistance among migrants in Europe: a systematic review and meta-analysis

BACKGROUND: Rates of antimicrobial resistance (AMR) are rising globally and there is concern that increased migration is contributing to the burden of antibiotic resistance in Europe. However, the effect of migration on the burden of AMR in Europe has not yet been comprehensively examined. Therefore, we did a systematic review and meta-analysis to identify and synthesise data for AMR carriage or infection in migrants to Europe to examine differences in patterns of AMR across migrant groups and in different settings. METHODS: For this systematic review and meta-analysis, we searched MEDLINE, Embase, PubMed, and Scopus with no language restrictions from Jan 1, 2000, to Jan 18, 2017, for primary data from observational studies reporting antibacterial resistance in common bacterial pathogens among migrants to 21 European Union-15 and European Economic Area countries. To be eligible for inclusion, studies had to report data on carriage or infection with laboratory-confirmed antibiotic-resistant organisms in migrant populations. We extracted data from eligible studies and assessed quality using piloted, standardised forms. We did not examine drug resistance in tuberculosis and excluded articles solely reporting on this parameter. We also excluded articles in which migrant status was determined by ethnicity, country of birth of participants' parents, or was not defined, and articles in which data were not disaggregated by migrant status. Outcomes were carriage of or infection with antibiotic-resistant organisms. We used random-effects models to calculate the pooled prevalence of each outcome. The study protocol is registered with PROSPERO, number CRD42016043681. FINDINGS: We identified 2274 articles, of which 23 observational studies reporting on antibiotic resistance in 2319 migrants were included. The pooled prevalence of any AMR carriage or AMR infection in migrants was 25·4% (95% CI 19·1-31·8; I2 =98%), including meticillin-resistant Staphylococcus aureus (7·8%, 4·8-10·7; I2 =92%) and antibiotic-resistant Gram-negative bacteria (27·2%, 17·6-36·8; I2 =94%). The pooled prevalence of any AMR carriage or infection was higher in refugees and asylum seekers (33·0%, 18·3-47·6; I2 =98%) than in other migrant groups (6·6%, 1·8-11·3; I2 =92%). The pooled prevalence of antibiotic-resistant organisms was slightly higher in high-migrant community settings (33·1%, 11·1-55·1; I2 =96%) than in migrants in hospitals (24·3%, 16·1-32·6; I2 =98%). We did not find evidence of high rates of transmission of AMR from migrant to host populations. INTERPRETATION: Migrants are exposed to conditions favouring the emergence of drug resistance during transit and in host countries in Europe. Increased antibiotic resistance among refugees and asylum seekers and in high-migrant community settings (such as refugee camps and detention facilities) highlights the need for improved living conditions, access to health care, and initiatives to facilitate detection of and appropriate high-quality treatment for antibiotic-resistant infections during transit and in host countries. Protocols for the prevention and control of infection and for antibiotic surveillance need to be integrated in all aspects of health care, which should be accessible for all migrant groups, and should target determinants of AMR before, during, and after migration. FUNDING: UK National Institute for Health Research Imperial Biomedical Research Centre, Imperial College Healthcare Charity, the Wellcome Trust, and UK National Institute for Health Research Health Protection Research Unit in Healthcare-associated Infections and Antimictobial Resistance at Imperial College London

Scope

Scope, later retitled Centerscope, was published by the Boston University Medical Center to report on events at and around the Center