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Respiratory Viruses and Atypical Bacteria Co-Infection in Children with Acute Respiratory Infection

Author: Abdel Hamid Tamer A.
El Baroudy Nevine R.
El Rifay Amira S.
Hassan Dina M.
Sherif Lobna
Soliman May S.
Publication venue: 'ID Design 2012/DOOEL Skopje'
Publication date: 23/08/2018
Field of study

BACKGROUND: Acute respiratory infections (ARI) are one of the prevalent pediatric diseases. Coinfections of respiratory viruses and atypical bacterial respiratory pathogens are common.AIM: This study aimed to determine the prevalence of co-infection between respiratory pathogens including viruses, bacteria and atypical bacteria in a sample of Egyptian children presenting with symptoms of acute respiratory tract infection.METHODS: This one-year prospective cohort study conducted in Abo El Rish Pediatric Hospital, Cairo University over one year included children presenting with symptoms of acute respiratory infection. Enrolled children were subjected to nasopharyngeal swabs or throat swabs and then processed to detect viral, bacterial and atypical bacterial causative agents by culture), retrotranscription polymerase, Monoplex polymerase chain reaction (PCR) and Multiplex PCR.RESULTS: Viral etiological agents were detected in 20 cases (20.8%), while 76 patients (79.2%) had no definite viral aetiology. The most abundant virus detected was Rhinovirus in 36 (27.3%), followed by 21 (15.9%) were positive for RSV, 12 (9.1%) were positive for HMPV, 6 (4.5%) were positive for adenovirus and 3 (2.3%) were positive for influenza B. For Atypical bacterial causes Mycoplasma were positive for 9 (6.8%) cases and one case was positive for Bordetella parapertussis. Viral and atypical bacteria Co infection were detected in 14 (10.6%) of cases.CONCLUSION: These results suggest that coinfection with bacteria or atypical bacteria in children with acute respiratory tract infection is common and this co-infection can induce serious illness. The multiplex reverse-transcriptase polymerase chain reaction should become an essential tool for epidemiological studies and can fill the gap between clinical presentation and definitive diagnosis

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Elective cancer surgery in COVID-19-free surgical pathways during the SARS-CoV-2 pandemic: An international, multicenter, comparative cohort study

Author: Aawsaj Y.
Abad Gurumeta A.
Abad-Motos A.
Abate E.
Abatini C.
Abbadessa F.
Abbas A. M.
Abbassi-Ghadi N.
Abbott D.
Abbott T.
Abd Elazeem H. A. S.
Abdalla M.
Abdallah M.
Abdel Al S.
Abdel Jalil R.
Abdeldayem H.
Abdelkader Salama I.
Abdelkarem M. M.
Abdelkarim M.
Abdelmajeed A.
Abdelrahman A.
Abdelrahman S.
Abdelsamed A.
Abdou M.
Abdulkareem A.
Abdulwahed E.
Abdur-Rahman L.
Abel M. K.
Abellan M.
Aboelkassem Ibrahim A.
Abosamak N. E.
Abou Chaar M. K.
Abou-Khalil J.
Abouassi A.
Aboulkassem H.
Abreu Da Silva A.
Abu J.
Abu Za'nouneh F. J.
Abu-Nayla I.
Abubakar A.
Acebes Garcia F.
Achalandabaso Boira M.
Acher A.
Acrich E.
Adamina M.
Adamoli L.
Addae-Boateng E.
Aderombi A.
Adeyeye A.
Adiamah A.
Adishesh M.
Agapov M.
Aggarwal A.
Aghayeva A.
Agilinko J.
Agnes A.
Agostini C.
Agoston P.
Agrawal A.
Agresta F.
Aguado H.
Aguilar Gonzalez M.
Aguzzoli L.
Ahad S.
Ahmadi N.
Ahmeidat A.
Ahn J. H.
Aiken T.
Aime A.
Ajlan A.
Akalin M.
Akaydin E.
Akeel N.
Akgor U.
Akhtar M. A.
Akhter Rahman M. M.
Akilli H.
Akin E.
Akkour K.
Akmenkalne L.
Al Abdallah M.
Al Awwad S.
Al Habes H.
Al Maadany F. S.
Al Raddadi R.
Al-Habib A.
Al-Habsi R.
Al-Ishaq Z.
Al-Khayal K.
Al-Masri M.
Al-Mohammad A.
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AL-Sayed M.
Al-Tamimi Y.
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Finnegan L.
Fiore M.
Fiori E.
Fiorini A.
Firat N.
Fisher A.
Fitzgerald C.
Fitzjohn H.
Flamey N.
Flavin M.
Fleming C.
Fleming D.
Fleming J.
Fletcher A.
Flindall I.
Flores Clotet R.
Foley D.
Foley E.
Folli S.
Fong R.
Fonseca F.
Fonsi G. B.
Fontana M.
Fontana T.
Foo C. C.
Ford S. J.
Fordington S.
Forouhi P.
Fortuna L.
Fossett R.
Fotopoulou C.
Foulkes R.
Fountain D.
Fowler A.
Fowler G.
Fox A.
Frade S.
Fragulidis G.
Frampton A.
Franco G.
Francone E.
Frankel A.
Franken J.
Frantzeskou K.
Franza M.
Fraser L.
Fraser S.
Frasson M.
Frati A.
Frattaruolo C.
Fregatti P.
Freitas A.
Frena A.
Freyschlag C.
Freystaetter K.
Frias L.
Frio F.
Frisoni T.
Fritzmann J.
Frongia F.
Fruscio R.
Fu H.
Fuks D.
Fulginiti S. F.
Fullmer T.
Fumagalli Romario U.
Furbetta N.
Fusai G.
Fusetti S.
Fuson A.
Futaba K.
Fuwa O.
Gabre-Kidan A.
Gacic S.
Gagliano A.
Gagliardi F.
Gahunia S.
Gaino F.
Gainza A.
Gajjar K.
Gala T.
Galindo Jara P.
Galis B.
Gallagher K.
Gallagher T.
Galliamov E.
Gallo G.
Galun D.
Galvao D.
Gambacciani C.
Gan C.
Gananadha S.
Ganau M.
Gani J.
Ganly I.
Garces Garcia R.
Garces-Albir M.
Garcia Alonso M.
Garcia Egea J.
Garcia Escudero D.
Garcia Gutierrez J. J.
Garcia J. S.
Garcia P. M.
Garcia Perez D.
Garcia Perez J. M.
Garcia Pineda V.
Garcia Porcel V. J.
Garcia Rico E.
Garcia Romero E.
Garcia Santos E. P.
Garcia Septiem J.
Garcia Soria V.
Garcia Villayzan J. E.
Garcia-Conde M.
Garcia-Loarte Gomez E.
Garcia-Moreno Nisa F.
Garcia-Quijada J.
Garcia-Sancho Tellez L.
Garfinkle R.
Garmanova T.
Garrett W.
Garrido R.
Garrido S.
Gascon Ferrer I.
Gash K.
Gaskill C.
Gasparini G.
Gata V.
Gatti A.
Gattolin A.
Gaunt A.
Gauri N.
Gavalda Pellice M. G. P.
Gearon D.
Geddes A.
Gegundez Simon A.
Gelarda E.
Gemmell C.
Gemmill E.
Gennari S.
Gennaro M.
Gentilli S.
Georgiades F.
Geraghty J.
Gerchunoff J. I.
Geretto P.
Ghallab I.
Ghaly G.
Ghamgh R.
Ghanbari A.
Ghanem R.
Ghannam A.
Ghazali N.
Ghedan S.
Ghitulescu G.
Ghufoor K.
Ghunaim M.
Giacometti M.
Giaglaras A.
Gialamas E.
Gianardi D.
Gianni A.
Giannini L.
Giardini M.
Giblin A.
Gibson D.
Gigliotti J.
Gil C. G.
Gil Ibanez B.
Gil Martinez J.
Gill C.
Gill R.
Gillen K.
Gillis A.
Gimenez Frances C.
Ginesu G. C.
Ginghina O.
Giralt Lopez De Sagredo J.
Giraudo G.
Giray B.
Giuffrida M. C.
Giugliano M.
Giuliani G.
Gkekas I.
Gklavas A.
Gkrinia E.
Glasbey J. C.
Glehen O.
Glencer A.
Goddard J.
Goksoy B.
Golda T.
Gomes Da Costa A.
Gomes H.
Gomes J.
Gomez Diaz C. J.
Gomez Fernandez L.
Gomez Latorre L.
Gomez P.
Gomez Ruiz M.
Gomez Sanz T.
Gomez-Pedraza A.
Gomez-Rosado J.
Gonullu E.
Gonzalez Garcia J. A.
Gonzalez J.
Gonzalez Sanchez J. J.
Gonzalez Valverde F. M.
Gonzalez-Gonzalez E.
Gonzalez-Nicolas Trebol M. T.
Goodrum S.
Goran M.
Gordini L.
Gore S.
Gori A.
Gortazar S.
Gosau M.
Gossage J.
Gossot D.
Gould T.
Gourbault L.
Gourlay R.
Gouvas N.
Gowda M.
Goyal A.
Gozal K.
Gracia I.
Gracia M.
Gracia-Roche C.
Gradinariu G.
Grama F.
Granata V.
Granieri S.
Grassi T.
Grau-Talens E. J.
Graystone J.
Grechenig M.
Green L.
Green S.
Gregorio P.
Gricks B.
Grieco C.
Griffiths B.
Griffiths E. A.
Griffiths O.
Grigoroiu M.
Grilo J. V.
Grimes H.
Grimley E.
Grivas T.
Gronchi A.
Gross N.
Grossi U.
Grotenhuis B.
Grove T.
Grubac Z.
Gruber R.
Grujicic D.
Grundy C.
Guadagni S.
Guaglio M.
Guardia N.
Guariglia C. A.
Guerci C.
Guerra G. R.
Guerreiro P.
Gueutier A.
Guevara J.
Guglielmetti L.
Guglielmi A.
Guidi G.
Guillamot Ruano P.
Guimaraes A.
Gujjuri R. R.
Guler S. A.
Gultekin M.
Gundara J.
Gupta A.
Gurrea E.
Gusani N.
Gutierrez Calvo A.
Gutierrez Fernandez A. I.
Gutierrez Samaniego M.
Gvaramadze A.
Ha P.
Habeeb A.
Habib N.
Hagger R.
Hague M.
Haidopoulos D.
Hainsworth A.
Hajiioannou J.
Hakami I.
Hall J.
Hallam K.
Halliday E.
Halloran C.
Hamad A.
Hamdan K. H.
Hamdy R.
Hamilton B. C. S.
Hammer C.
Hammond J.
Hamrang-Yousefi S.
Hamzaoglu I.
Handa S.
Hanna M.
Hannah A.
Hanson A.
Harald M.
Harbjerg J. L.
Hardie C.
Hardie J.
Hardy N.
Harky A.
Harries R.
Harris G.
Harrison E.
Harrison-Phipps K.
Hartveld L.
Hasan M. T.
Hasenburg A.
Hassan E.
Hassan N.
Hassell K.
Hawari M.
Hawkin P.
Hawkins A.
Hayati F.
Hayhurst R.
Hayne D.
Haynes A.
Hazelton J.
Heaton C.
Heinius G.
Helmi H.
Helminen O.
Henderson E.
Heneghan H.
Henriques P.
Henriques S.
Henry A.
Heras Aznar J.
Heredia F.
Herman A.
Hernandez Bartolome M. A.
Hernandez Gutierrez A.
Hernandez I.
Hernandez P.
Hernandez R.
Hernandez-Garcia M.
Hernanz F.
Heron C.
Herrera-Merino N.
Herrero Lopez M.
Herrod P.
Heuer A.
Hidalgo Salinas C.
Higgs S.
Hii M. W.
Hill C.
Hilton T.
Hirose K.
Hmedat A.
Ho D.
Ho M. F.
Hogan A.
Hogan J.
Hollyman M.
Holzle F.
Hompes R.
Hon S. F.
Hopper J.
Horsnell J.
Hossain T.
Houlden C.
Houston R.
Hovhannisyan T.
Howe D.
Howes N.
Hoyos Castro J. A.
Huang L.
Hudson V.
Huertas Fernandez M. A.
Hughes F.
Huhta H.
Humes D.
Humphreys L.
Humphries S.
Hunt A.
Hunt L.
Hussain A. H.
Hutchinson P.
Hutchison R.
Huynh K.
Hwang E. S.
Iannone I.
Ibanez-Aguirre F. J.
Ibrahim A.
Ibrahim M. R.
Ibrahim S.
Idle M.
Ikram H.
Ilenkovan N.
Ilic R.
Imam S. M. B.
Incollingo P.
Inglis R.
Inic Z.
Ioannidis O.
Ionescu A.
Iordache N.
Iosifescu R. V.
Ipponi P.
Irune E.
Irvine V.
Ishikawa M.
Ishiyama K.
Ismail O.
Isolani S. M.
Iversen L. H.
Iwata S.
Izbicki J.
Izzo F.
Jablons D. M.
Jackman J.
Jacome F.
Jah A.
Jain A.
Jamal A.
James G.
Jamjoum G.
Jang S.
Janjic T.
Jariod Ferrer U. M.
Javurkova V.
Jawad Z.
Jayarajah U.
Jayasankar B.
Jayasilan J.
Jayasinghe J. D.
Jeevan D.
Jeftic N.
Jelenkovic J.
Jelley C.
Jelovac D.
Jenkinson M.
Jenny H. E.
Jeremic K.
Jevric M.
Jeyarajan E.
Jeyaretna D.
Jeys L.
Jezdic Z.
Jezieniecki C.
Jha M.
Jia F.
Jiao L.
Jibreel M.
Jibril A.
Jimenez A.
Jimenez Higuera E.
Jimenez Miramon J.
Jimenez Toscano M.
Jimenez V.
Jimenez-Roldan L.
Jimeno Fraile J.
Jocson R.
Jog S.
John J.
Johnston B.
Johnstone J.
Jokic V.
Jonas E.
Jones D.
Jones L.
Jones M.
Jones R.
Jones S. E. F.
Jones T.
Jonescheit J.
Jorba R.
Jordan P.
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Joshi A.
Joshi N.
Jotic A.
Jouffret L.
Jover J. M.
Jovine E.
Kaafarani H. M. A.
Kadija S.
Kafka M.
Kahn A.
Kajmakovic B.
Kakisi O.
Kakotkin V.
Kalaitsidou I.
Kalavrezos N.
Kalfountzos C.
Kalkat M.
Kamal M.
Kamal N.
Kamburoglu M. B.
Kamera B. S.
Kamocka A.
Kamoka E.
Kamphues C.
Kanatas A.
Kanematsu K.
Kanemitsu Y.
Kang C.
Kantola V.
Kapoor S.
Kappenberger A.
Kapriniotis K.
Kara H.
Kara Y.
Karabatsou K.
Karahasanoglu T.
Karaitianos I.
Karaman E.
Karamarkovic A.
Karandikar S.
Karim A.
Karlovic D.
Kashif M.
Kasivisvanathan V.
Kassir R.
Kato T.
Katory M.
Kattakayam A.
Katusic Z.
Kauffmann P.
Kaufmann A.
Kauppila J. H.
Kaur R.
Kaushal M.
Kavanagh D.
Kawai A.
Kay H.
Kaya T.
Kazachenko E.
Kazzaz S.
Kebabci E.
Kecmanovic D.
Keeler B.
Kelly M.
Kelty C.
Kenic M.
Kennedy N.
Kent A.
Kenyon L.
Kepenekian V.
Kerawala A. A.
Kerin M.
Khajuria A.
Khan A. H.
Khan D. Z.
Khan F.
Khan T.
Khan W. H.
Khatkar H.
Khoja A.
Khout H.
Kiconco H.
Kidane B.
Kilani A. I.
Kilinc G.
Killeen S.
King E.
King J.
King M.
Kinsella J.
Kiong K.
Kirchberg J.
Kirk A.
Kirkwood K.
Kirmizi Y.
Kisiel A.
Kitchen M.
Kittur M.
Kjaer D. W.
Klaristenfeld D.
Klat J.
Klatte T. O.
Kleeff J.
Klenke F.
Kler A.
Klimopoulos S.
Kloppers C.
Kmezic S.
Knezevic D.
Knight W.
Knitschke M.
Knowles B.
Knowles C.
Ko K. Y. K.
Kobayashi E.
Kobayashi Kato M.
Kocatas A.
Kocer B.
Kocher H.
Koenig D.
Koh A.
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Koken H.
Kokkinos G.
Kokoropoulos P.
Koleva Radica M.
Kolias A. G.
Kollar A.
Kolli V. S.
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Konsten J.
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Kornaszewska M.
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Kyriacou H.
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La Torre F.
Labib P. L.
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Ladjevic Likic I.
Laface L.
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Lago V.
Lah K.
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Lala A. K.
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Lasa I.
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Latincic S.
Lau K.
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Lawal T. A.
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Lazaro A.
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Leal C.
Leal Silva I.
Lecolle K.
Lecumberri D.
Ledesma F. S.
Lee M.
Lee R. X. N.
Lee W.
Leede E.
Leeson S.
Legault G.
Lemma F.
Lennon P.
Lenzi E.
Leon R.
Leonardo C.
Lester S.
Leung E.
Levy-Zauberman Y.
Lewis-Lloyd C.
Li E.
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Liakakos T.
Liao C. C. L.
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Lifante J.
Lim A.
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Lin D. J.
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Liokatis P.
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Lopez Abad A.
Lopez Campillo A.
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Yousof E. A.
Youssef A.
Youssef M.
Yuksel E.
Yurttas C.
Zacharoulis D.
Zafar S. N.
Zakai D.
Zakaria A. D.
Zakaria R.
Zakaria Z.
Zambelli M. F.
Zambon M.
Zamora L.
Zamvar V.
Zani S.
Zanotti S.
Zanus G.
Zapardiel I.
Zarabini A. G.
Zatecky J.
Zegarac M.
Zelic M.
Zeller N.
Zengin A. K.
Zerbib P.
Zervas K.
Zese M.
Zhang H.
Zivanovic M.
Zivkovic M.
Zizzo M.
Zografos C.
Zonta S.
Zorrilla Ortuzar J.
Zourntou S.
Zouzoulas D.
Zubaidi A.
Zullo A.
Publication venue: 'American Society of Clinical Oncology (ASCO)'
Publication date: 01/01/2021
Field of study

PURPOSE As cancer surgery restarts after the first COVID-19 wave, health care providers urgently require data to determine where elective surgery is best performed. This study aimed to determine whether COVID-19–free surgical pathways were associated with lower postoperative pulmonary complication rates compared with hospitals with no defined pathway. PATIENTS AND METHODS This international, multicenter cohort study included patients who underwent elective surgery for 10 solid cancer types without preoperative suspicion of SARS-CoV-2. Participating hospitals included patients from local emergence of SARS-CoV-2 until April 19, 2020. At the time of surgery, hospitals were defined as having a COVID-19–free surgical pathway (complete segregation of the operating theater, critical care, and inpatient ward areas) or no defined pathway (incomplete or no segregation, areas shared with patients with COVID-19). The primary outcome was 30-day postoperative pulmonary complications (pneumonia, acute respiratory distress syndrome, unexpected ventilation). RESULTS Of 9,171 patients from 447 hospitals in 55 countries, 2,481 were operated on in COVID-19–free surgical pathways. Patients who underwent surgery within COVID-19–free surgical pathways were younger with fewer comorbidities than those in hospitals with no defined pathway but with similar proportions of major surgery. After adjustment, pulmonary complication rates were lower with COVID-19–free surgical pathways (2.2% v 4.9%; adjusted odds ratio [aOR], 0.62; 95% CI, 0.44 to 0.86). This was consistent in sensitivity analyses for low-risk patients (American Society of Anesthesiologists grade 1/2), propensity score–matched models, and patients with negative SARS-CoV-2 preoperative tests. The postoperative SARS-CoV-2 infection rate was also lower in COVID-19–free surgical pathways (2.1% v 3.6%; aOR, 0.53; 95% CI, 0.36 to 0.76). CONCLUSION Within available resources, dedicated COVID-19–free surgical pathways should be established to provide safe elective cancer surgery during current and before future SARS-CoV-2 outbreaks

Archivio istituzionale della Ricerca - Università degli Studi di Parma

Elective Cancer Surgery in COVID-19-Free Surgical Pathways During the SARS-CoV-2 Pandemic: An International, Multicenter, Comparative Cohort Study.

Author: Aawsaj Y.
Abad Gurumeta A.
Abad-Motos A.
Abate E.
Abatini C.
Abbadessa F.
Abbas A. M.
Abbassi-Ghadi N.
Abbott D.
Abbott T.
Abd Elazeem H. A. S.
Abdalla M.
Abdallah M.
Abdel Al S.
Abdel Jalil R.
Abdeldayem H.
Abdelkader Salama I.
Abdelkarem M. M.
Abdelkarim M.
Abdelmajeed A.
Abdelrahman A.
Abdelrahman S.
Abdelsamed A.
Abdou M.
Abdulkareem A.
Abdulwahed E.
Abdur-Rahman L.
Abel M. K.
Abellan M.
Aboelkassem Ibrahim A.
Abosamak N. E.
Abou Chaar M. K.
Abou-Khalil J.
Abouassi A.
Aboulkassem H.
Abreu Da Silva A.
Abu J.
Abu Za'nouneh F. J.
Abu-Nayla I.
Abubakar A.
Acebes Garcia F.
Achalandabaso Boira M.
Acher A.
Acrich E.
Adamina M.
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Aderombi A.
Adeyeye A.
Adiamah A.
Adishesh M.
Agapov M.
Aggarwal A.
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Wilkins A.
Williams G.
Williams J.
Williams K.
Williams M. A.
Williams T.
Williamson K.
Wilson M.
Wimberger P.
Wimmer A.
Winnand P.
Winter D.
Winter S.
Wolfer S.
Wong M. P. K.
Wong S.
Wong W. J.
Woodham A.
Woodun H.
Worku D.
Wright G.
Wullschleger M.
Wustrack R.
Xenaki S.
Xu M. J.
Xyda S. E.
Xynos E.
Yahaya A. S.
Yanez C.
Yang W.
Yassin N.
Ye G.
Yesantharao P.
Yesilyurt D.
Yetkin G.
Yiallourou A.
Yildirim A.
Yildiz A.
Ying Y.
Yip V.
Yordanov S.
Young R.
Yousof E. A.
Youssef A.
Youssef M.
Yuksel E.
Yurttas C.
Zacharoulis D.
Zafar S. N.
Zakai D.
Zakaria A. D.
Zakaria R.
Zakaria Z.
Zambelli M. F.
Zambon M.
Zamora L.
Zamvar V.
Zani S.
Zanotti S.
Zanus G.
Zapardiel I.
Zarabini A. G.
Zatecky J.
Zegarac M.
Zelic M.
Zeller N.
Zengin A. K.
Zerbib P.
Zervas K.
Zese M.
Zhang H.
Zivanovic M.
Zivkovic M.
Zizzo M.
Zografos C.
Zonta S.
Zorrilla Ortuzar J.
Zourntou S.
Zouzoulas D.
Zubaidi A.
Zullo A.
Publication venue: J Clin Oncol
Publication date: 01/01/2020
Field of study

PURPOSE: As cancer surgery restarts after the first COVID-19 wave, health care providers urgently require data to determine where elective surgery is best performed. This study aimed to determine whether COVID-19-free surgical pathways were associated with lower postoperative pulmonary complication rates compared with hospitals with no defined pathway. PATIENTS AND METHODS: This international, multicenter cohort study included patients who underwent elective surgery for 10 solid cancer types without preoperative suspicion of SARS-CoV-2. Participating hospitals included patients from local emergence of SARS-CoV-2 until April 19, 2020. At the time of surgery, hospitals were defined as having a COVID-19-free surgical pathway (complete segregation of the operating theater, critical care, and inpatient ward areas) or no defined pathway (incomplete or no segregation, areas shared with patients with COVID-19). The primary outcome was 30-day postoperative pulmonary complications (pneumonia, acute respiratory distress syndrome, unexpected ventilation). RESULTS: Of 9,171 patients from 447 hospitals in 55 countries, 2,481 were operated on in COVID-19-free surgical pathways. Patients who underwent surgery within COVID-19-free surgical pathways were younger with fewer comorbidities than those in hospitals with no defined pathway but with similar proportions of major surgery. After adjustment, pulmonary complication rates were lower with COVID-19-free surgical pathways (2.2% v 4.9%; adjusted odds ratio [aOR], 0.62; 95% CI, 0.44 to 0.86). This was consistent in sensitivity analyses for low-risk patients (American Society of Anesthesiologists grade 1/2), propensity score-matched models, and patients with negative SARS-CoV-2 preoperative tests. The postoperative SARS-CoV-2 infection rate was also lower in COVID-19-free surgical pathways (2.1% v 3.6%; aOR, 0.53; 95% CI, 0.36 to 0.76). CONCLUSION: Within available resources, dedicated COVID-19-free surgical pathways should be established to provide safe elective cancer surgery during current and before future SARS-CoV-2 outbreaks

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Institutional Research Information System University of Turin

The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance

Author: Aanniz Tarek
Abar Aden Elmi
Abbad Anass
Abdelfattah May
Abdelhamid W.
Abdella Saro
Abdellah Faouzi
Abdelmjid El Oualid
Abdelmoula Fatma
Abdelmoulah F.
Abderrahmane Maaroufi
Abderrazak Rfaki
Abdillahi Idil Salah
Abdissa Alemseged
Abdo I.
Abdoelraheem Mohamed Hassan
Abe Haruka
Abebe Markos
Abechi Priscilla
Abera Adugna
Abi Rachid
Abias Abe G.
Abichu Getachew
Abid N.
Abid Nabil
Abid Salma
Abilio Nuro
Abimbola Sharon
Abo Shama Noura M
Abosede O.
Aboubaker Mohamed Houmed
Abouelhoda Mohamed
Abouelnaga S.
Abualas Elamin
Abubeker Ramalia Chabi
Abuelenein Ehab Abdelkader
Abuzaid Nadir
Abworo Edward O.
Ada Diosdado Odjama Nseng
Addidle Michael
Adegbola Richard
Adegnika Akim A.
Adegnika Ayola Akim
Adel Abd Monaem
Adeniji Johnson A.
Adepetun Tomiwa
Adesegun A.
Adesuyi Omoare
Adetifa Ifedayo M. O.
Adewumi Olubusuyi M.
Adewumi Oluwatimilehin
Adewumi Praise
Adeyemi Kayode T.
Adhikari Bishwo N.
Adil El Hamouchi
Adjiratou Aissatou B. A.
Adnew Bethlehem
Adu Bright
Adu Eric
Adusei-Poku Mildred
Agbenyo Seyram Bless
Agbodzi B.
Ageez A.M.
Agoti Charles N.
Aguenaou Hassan
Agwa Sara Hassan
Agweyu Ambrose
Ahmed El Bara
Ahmed Elhadi A.
Ahmed Hatem
Ahmed M.
Ahmed O. S.
Ahmed Rahma
Ahmed Shymaa S.
Ahmed Side Mohamed
Ahmed Yahaya Ali
Ahouidi Ambroise
Ahuka-Mundeke Steve
Ahumibe Anthony
Ahyong Vida
Aissam El Aliani
Ajayi Nnennaya A.
Ajibaye Solomon
Ajili F.
Ajogbasile F.V.
Ajogbasile Fehintola V.
Akanbi Olusola Anuoluwapo
Akenji Blaise MBoringong
Akhoud Youssef
Akinola Monilade
Akogbeto Petas
Akoua-Koffi Chantal G.
Akpede George O.
Al Onifade Fattah
Alain Etoundi Mballa
Alaoui Afaf
Alaoui-Amine Sanaa
Alarif Ahlam
Alaruusi A. M.
Albert Mélanie
AlEmam Adba Alfatih
Alemayehu Dawit Hailu
Alemu Fekadu
Algheriani Raiva
Ali Abraham
Ali M.A.
Ali Mohamed Ahmed
Ali Mushal
Ali Wael
Alkarim Mona O.A.
Allam Loubna
Allam Mushal
Allam Mushal
Altamura Settimia
Amar Narjis
Amenga-Etego Lucas N.
Amer K. E.
Amer Khaled
Amira Souissi
Amoako Daniel G.
Amoo Olufemi Samuel
Amoth Patrick
Amougou Marie
Ampofo William K.
Amuri Adrienne A.
Amuzu Dominic S. Y.
Amzazi Saaïd
Anang Abraham Kwabena
Anas Abbad
Andeko Julia C.
Andersen Kristian
Andersson Hana Sofia
Andika Brian
Andres Moreira-Soto
Andriam Soa Fy
Andriamandimby Soa Fy
Anga Latifa
Ange Dossou
Angelov Angel
Anna-Lena Sander
Annajr B.
Anoh Etilé A.
Anscombe Catherine
Antwerpen Markus H.
Anu Campbell
Anyaneji Ugochukwu J.
Anyika Chinyere
Aouni M.
Appiah Vincent
Appiah-Kubi Joyce
Arena Fabio
Arjaquah Augustina
Arjarquah A.
Armand Edang-Minko
Armanious Riad Mounir
Armoo Samuel
Arnaldo Paulo
Arnold Catherine E.
Arrouchi Housna
Artesi Maria
Aryeetey Sherihane
Asamoah Jesse Addo
Asante Ivy A.
Asare K.M.
Ashton Philip
Ashton Phillip
Asiedu Ernest
Asiedu-Bekoe Franklyn Egbe
Asiimwe Stephen
Askander Omar
Asmamaw Kominist
Assane Hamadi
Assoumou Samira Zoa
Atiga N.
Attiku Keren Okyerebea
Audu Rosemary A.
Auld A.
Awandare Gordon A.
Awinda George
Awunyo Sena
Ayansola Oyeronke
Ayei James
Ayekaba Mitoha Ondo’o
Ayivor-Djanie Reuben
Aymane Bouzidi
Ayo-Ale B.
Ayoade F.
Ayoola Joy
Ayouba Ahidjo
Aziz Ramy Karam
Aziza Amuri
Azman Andrew
Aïssi Melchior A. Joël
Ba-Diallo Awa
Babatunde Sunday
Baboo S. B.
Badjo Ange
Badou Yvette
Bagaya Bernard Ssentalo
Bah Mamadou Saliou
Bahadoor B. S.
Bahnassy A.A.
Bajjou Tahar
Baker David
Baker Noah
Bakhash Shah Mohamed
Bakry U.
Balde Aladje
Balde Aladje
Balm Michelle
Bamourou Diané
Banda R.
Bane S.
Barasa Edwine
Barbet Marion
Bareng Ontlametse T.
Barilar Ivan
Barkat Amina
Barnes Kayla
Barreh Guedi Ali
Bashein Abdulla
Bassène Hubert
Batchi-Bouyou Armel L.
Batchi-Bouyou Armel L.
Bates Matthew
Batra Dhwani
Batra R.
Bauer Peter
Baxter Cheryl
Bayih Abebe Genetu
Bbosa Nicholas
Bedford Trevor
Bediako Yaw
Bedié
Bedri Shahinaz.A.
Behillil Sylvie
Bejon Philip
Belarbi Essia
Belfquih Bouchra
Belkhir A.B.
Bellefquih Abdelkrim Meziane
Beloufa Mohamed Amine
Belournou Grace Angong
Ben Alaya Nissaf
Ben Ayed I.
Ben Boubaker Ilhem Boutiba
Ben Boubaker Ilhem Boutiba
Ben Kahla Alia
Ben Khelil Jalila
Ben Moussa Mohamed
Ben Othman Roua
Ben Romdhane Habiba
Ben Sassi Manel
Ben Sassi Mouna
Benaissa Elmostafa
Benhida Rachid
Benkeroum Samira
Benkirane Hasnae
Bennett Andrew J.
Benrahma Houda
Bensaid M.
Bensalem Aicha
Benyahia Amel
Bestehorn-Willmann Malena S.
Bester Phillip A.
Beyene Getachew Tesfaye
Bhiman Jinal N.
Bighignoli B.
Bikangui Rodrigue
Bimouhen Abderrahmane
Bingono Sam O'neilla Oye
Biscornet Leon
Bishop-Lilly Kimberly A.
Bitew Molalegne
Bitrou S.M.
Bizard Méline
Bióté Simão Tchuda
Blackmore Timothy
Blakiston Matt
Bloomfield Max
Bnouyahia Ikram
Boatemaa Linda
Bolajoko Bankole
Bonney Evelyn Y.
Bonney Joseph H. K.
Bonney Kofi
Bontems Sébastien
Bootsma Sacha
Borrmann Steffen
Boter Marjan
Boujemla Bouchra
Bours Vincent
Boussoukou Ismael Pierrick Mikelet
Bouzid Amal
Bouzid Jawad
Bracchitta Fiorenza
Brechar Ludivine
Bridges Daniel J.
Briese Thomas
Brisebarre Angela
Brook Cara
Bssaibis Fatna
Budiaki Sylvie L.
BUHARI Mikhail Olayinka
Bulimo Wallace D
Bunga Sudhir
Butel Christelle
Butera Yvan
Bwogi Josephine
Camara Alimou
Camara Makhtar
Campbell Allan
Campbell Julian
Cancino Irving
Candé Adul
Capel Camille
Carey Omondi Francis
Carniel Elisabeth
Carr Rosina A. A.
Carri Valeria Delli
Carvalho Kevin S.
Cassama Faatu
Cedola Donatella
Cer Regina Z.
Chabert-Consen Marie Madeleine
Chabuka L. B.
Chabuka Lucious
Chambaro H.
Chammam Sara
Chamman Sarra
Chanda D.
Changula K.
Charlene Sonal P.
Chawech H.
Chenaoui Mohamed
Chenwi Collins
Chestakova Irina
Chgouri Fatima
Chilufya C.
Chilufya Moses
Chimedza Jasper
Chinedu Ugwu
Chipimo P.J.
Chitanga S.
Chitechi Esther
Chitenje M.
Chiwaula M. J.
Choga Wonderful T.
Chouati Taha
Chouikha Anissa
Christoffels Alan
Chtourou A.
Chukwu Chimaobi
Chukwu G.
Cigolo Jean-Claude Makangara
Cisse Barada
Clarisse Murebwayire
Colson Philippe
Comas Iñaki
Combe Patrice
Corman Victor Max
Cortes Carlos
Cotten Matthew
Crawford M.
Crespin Xavier
Cá Milanca Agostinho
D'Amore N.
D'Aprile Annamaria
Dadi Hailu
Daghfous Riadh
Dagnran Anoumou
Dakka Hanae
Dal Monego Simeone
Damaris Matoke-Muhia
Damena D.
Damilari Dabiri
Daniels Rodney S.
Dao Sounkalo
Daou Amadou
Dara Antoine
Daubenberger Claudia
David Kumbelembe
Davids Micheala
Davies Mary-Ann
Dawood R.M.
Dawood Reham
de Laurent Zaydah R.
de Ligt Joep
De Nittis Rosella
de Oliveira Filho Edmilson F.
de Oliveira Martins Leonardo
de Oliveira Tulio
De Sanctis R.
de Silva Thushan I
DeAlmeida Mary
Debela Alemu Tike
Delaney Kayla
Delaporte Eric
Delerce Jeremy
Dellagi Koussay
Deng Guohong
Deng Lul Lojok
DeRisi Joseph L.
Derrar Fawzi
Descheemaeker Patrick
Deschenes Michael V.
Desta Adey Feleke
Detweiler Angela M.
Devatchagni Syntyche
Devaux Christian A.
Dhaala Beatrice
Dia Aminata
Dia Ndongo
Dia Yacine Amet
Diab A.
Diagne Diabou
Diagne Moussa M.
Diakite Mandiou
Diallo Amadou
Diallo Haby
Diallo Penda Malhado
Diallo Sada
Diarra B.
Diarra Bassirou
Diaw Papa Alassane
Diawara Idrissa
Dieng Alle Baba
Dieng Assane
Diergaardt Azaria
Diop Mamadou
Diop Oumy
Djimde Abdoulaye
Djingarey Mamoudou Harouna
Djomsi Dowbiss Meta
Djontu Jean Claude
Dobi Paul
Donati Flora
Dorkenoo Ameyo
Doudou Fetouma
Douffan Messanh
Doumbia Seydou
Draper C.
Dratibi Fred A.
Drinkovic Dragana
Drosten Christian
Duedu Kwabena O.
Durkin Keith
Dussart Philippe
Dussart Philippe
Dürr Kouriba
Ebied Fatma
Ebong Ofonime
Eckstein Simone
Edu Emame
Eggan Stephen M.
Egli Adrian
Egoh Ifunanya
Egyir B.
Ehlan Amivi
El Amin Ghizlane
El ansari Fatima Zahra
El Atar Jalil
El Fahime Elmostafa
El Falaki Fatima
El Guindy Nancy M.
El Hady Yassine
El Jaoudi Rachid
El Jebari Hanen
El Mazouri Safae
El Mrimar Nadia
El Sayes Mohamed
El-Duah Philip
El-Shaqnqery H.
El-Shesheny Rabeh
El-Taweel Ahmed
El-Zayat M.
Elahmer Omar
Elalaoui Mly Abdelaziz
Elannaz Hicham
Elarab Hoda Ezz
Elargoubi A.
Elfihri Mohammed Walid Chemao
Elgahzaly Hesham
Elgohary Mohamed Abdel-Salam
Elguindy Nancy
Elhadidi Mohamed
Elhag Khabab A.
Elhamoumi Siham
ElHefnawi Mahmoud
Elhoseiny Mostfa
Elhoseny M.M.
Elhosieny F.W.
Elisabeth Carniel
Elkhateeb S.M.
Elkochri Safae
Ella Kevine Zang
Ellis Sean
ElMoussi Awatef
Elnakib Mostfa
Eloualid Mjid
Elouanass M.
Elouennass Mostafa
Elroby Ola
Elsaid Manal Hamdy
Elsawy Laila
Elsayed Ahmed
Elshora Hagar
Elsissy M.H.
Elvy Juliet
Elzagheid Adam I.
Embaló Bubacar Delgado Pinto
Emna Gaies
Emokpae Uyi
Enatha Mukantwari
Endjala Nathalia
Engelbrecht Susan
Ennibi H.
Enouf Vincent
Erameh Cyril
Erhart Annette
Eshun Miriam
Essabbar Abdelomunim
Essabbar Mouneem
Essayagh Touria
Essomba René G.
Essone Paulin N.
Estrella Luis A.
Everatt Josie
Exler Jan Felix
Ezzelarab M.H.
Fadeyi Abayomi
Fageer Sameira M.
Fageer Samira M.
Faggioni G.
Fahsbender E.
Fainguem Ndine
Faisal Muhammad
Fakayode Oluwatosin
Fakhfakh Ahmed
Fall Mbengué
Faouzi Abdellah
Faouzia Zemmouri
Farawyla H.
Fares Wasfi
Farghaly Ayman
Faye Martin
Faye Ousmane
Feasey Nicholas
Fedorov A.V.
Fekkak Jamal
Femi Ayoade
Femi Oladiji
Femi Saibu
Fenollar Florence
Ferjani Asma
Ferjani Sana
Fidelia Hinson
Fikry A.E.
Fillo S.
Fki-berrajah L.
Fki-Berrajah Lamia
Foda Iman
Fokam Joseph
Folarino O.
Folorunsho Francine
Foster-Nyarko Ebenezer
Foudi Martin Maidadi
Foulkes Benjamin H.
Fournier Pierre-Edouard
Fowora Muinah Adenike
Fowotade Adeola
Francisco Ngiambudulu M.
Frans Ndahafa
Fred Tei-Maya
Freed Nikki
Freeman Josh
Freitas R. H.
Frempong Hilda Opoku
Fuh-Neba T.
Fwoloshi Somda Soro Georgina
Gaaloul I.
Gad Ahmed F.
Gadzama Galadima
Gaies Emna
Galal
Galiwango Ronald M.
Galvao Bruna
Garcia Guillermo
Gardoul Mouhcine
Gargouri S.
Gargouri Saba
Garry R.
Garus-Oas Nathalia
Gaseitsiwe Simani
Gatare Swaibu
Gaye-Gaye Astou
Gdoura Mariem
Gedeon Jude
Gelanew Tesfaye
George Uwem E.
Gerard Izuwayo
GeurtsvanKessel Corine H.
Gevao Sahr
Gharmaz Hamza
Ghassan Adib
Ghedira Kais
Ghita Amalou
Ghoulame Safae
Giandhari Jennifer
Gideon Nsubuga
Giordani F.
Girgis Samia Abdou
Gismondo Maria Rita
Githii Rachid
Githinji George
Gnimadi Thibaut Armel Cherif
Goba Augustine
Godwe Celestin
Goedhals Dominique
Goldstone R.
Gomaa C.
Gomaa Mokhtar
Goodfellow Ian
Goredema Alexander
Gorman Richmond
Gorova Vivianne
Gosnell B. I.
Gottberg A.
Gouider Riadh
Grace Chukwa
Grad Alia
Grant Donald S.
Grantz Kyra
Grayo Solène
Greninger Alexander
Guedouar Houssem
Gueye Abdou Salam
Gueye Khadim
Gueye Ousseynou
Guindo Ibrahima
Gumbo Hlanai
Gumede Nicksy
Guseva N. P.
Gutema Gadissa
Gutierrez Ana V.
Gwayi S.
Gyamfi Jones
Gyapong John O.
Hachid Aissam
Hadad A.
Haddad Sonia V.
Hafez Hala
Hafez M.M.
Hailu Getnet
Halafawy A.
Halatoko Jacqueline Wemboo Afiwa
Halilou Ibrahima
Hamdani T.N.
Hamdy M.S.
Hammad M.
Hammami A.
Hammer David
Hamza Ghamaz
Hamzaoui Zaineb
Handrick Susann
Happi Anise N.
Happi Christian
Harding Doris
Harvey R.
Hassan Iman Abdillahi
Hassan R.
Hassan W.
Hassany Mohamed
Hawi Adede
Hayette Marie-Pierre
Heikel Jaafar
Hellemans Jorn
Helmy Sherine
Hemlali Mouhssine
Henson Sondes
Heraud Jean-Michel
Herring Belinda L.
Hicham Charoute
Hicham Elannaz
Hihi Nardjes
Hilali Abderraouf
Hilali Farida
Holland LaRinda A.
Hoornaert Laurien
Hope Virginia
Hosch Salome
Houda Harmak
Houechenou Rotimi Myrabelle Avome
Houhamdi Linda
Hounkanrin Gildas
Hounkpatin Benjamin
Howard Julia
Hsiao Marvin
Hsiao Nei-yuan
Hsu Sharon
Huang Meei-Li
Huddleston John
Hultquist Judd F.
Hussein Salah Eldin
Ian Lipkin W.
Ibrahim Muntaser elTayeb
Ibrahim Samira F.
Ibrahim Tomade A.M.
Ige F.A.
Iguosadolo Nosamiefan
Ihazmad Hassan
Ihekweazu Chikwe
Iknane A.A.
Imam Zeinab S.
Inglês L.
Inndi Rui
Intyre Leigh-Anne MC
Iranzadeh Arash
Ismael Nalia
Ismail A.
Ismail Arshad
Isong Josiah Ayoola
Issa Zoukaneirii
Iwalokun Bamidele
Iyanu Fred-Akintunwa
Jain Komal
Jalal D.
Jalal Nourlil
Jalloh Simbirie
Jamal Fekkak
Jambo Kondwani
James Ayorinde Babatunde
Jannoo N.
Jefferies Sarah
Jegede-Williams Anu
Jelly Lauren
Jerome Keith R
Jimoh Yusuf
Jiménez-Serrano Santiago
Jo Wendy Karen
JOEL Ireoluwa Yinka
Johane Shirley
Johnson Adeniji A.
Johnson Bankole
Joloba Moses
Joseph Rageema
Jouali Farah
Jumaa A.B.
Juru Agnes
Kabamba Gabriel
Kabanda Alice
Kabatesi Francisca
Kabbaj Hakima
Kaboré Firmin
Kacem Imen
Kadjo Herve Albéric Adje
Kagnissode Sidonie A.M.
Kagoné Thérèse
Kakai Clement G.
Kalantar K.
Kaleebu Pontiano
Kamal Mohamed
Kamara Santigie
Kamel Mina
Kamga Rodrigue
Kamoun S.
Kamulegeya Rogers
Kandaswamy Krishna Kumar
Kandeil Ahmed
Kandeil Ahmed
Kane Mouhamed
Kane Ndéye Coumba Touré
Kanjau Lilian
Kanjerwa Oscar
Kanteh Abdoulie
Kanyerezi Stephen
Kapata Nathan
Kapata P.C.
Kapaya F.
Kapin'a M.
Karidioula Safiatou
Karim Wasim Abdul
Karray Hakim H.
Karray Hela
Kartti Souad
Kasambara W.
Kasmy Zohour
Kassab Reham
Kassim Samar Kamal
Katabazi Ashaba Fred
Katagirya Eric
Kateete David Patrick
Katyshev A.D.
Kavunga-Membo Hugo
Kay Gemma L.
Kayali Ghazi
Kayed Ahmed E
Kayeyi N.
Kayiwa John T.
Kayuki Charles
Kazeem Akano
Kazorina E.V.
Kebabonye Malebogo
Keita Alpha K.
Keita Mamadou Bhoye
Keita S.
Keita Sakoba
Kemi Adedotun-Sulaiman
Kepler Lenora M.
Kezakarayagwa Eric
Khaireh Bouh Abdi
Khalid Ennibi
Khalifa Mohamed K.
Khamadi Samoel Ashimosi
Khan Adam K.
Kharat N.
Khardine Fayez
Khardine Fayez Ahmed
Kharrat Maher
Khumalo Z.
Kibet Gilbert
Kiconco Jocelyn
Kidane Eleni
Kiemdé Franklin
Kifude Carol
Kigozi Edgar
Kiiza Ronald
Kim L.
Kimita Gathii
Kimotho J.
Kingsley Ojide C.
Kingsley Robert A.
Kirimunda Samuel
Kiritu Edward
Kleinhans Bronwyn
Kohoun Rodrigue K.
Koita Demba
Koivogui Joel
Koka Hellen
Kolomoets E.V.
Kone Amadou
Konou Abla A.
Konstantinus Iyaloo S.
Koné Amariane
Koné Amariane M. M.
Kooepile Legodile
Koopmans Marion
Koskei Edith
Kossi Komlan
Kotey Erasmus
Kouriba Bourema
Kourouma Kaba
Kpeli Grace S.
Krasnov Y.M.
Krasnov Ya.M.
Kritsky A.A.
Kujabi Mariama
Kumordjie Selassie
Kutkat Omnia
Kutyrev V.V.
Kwasah Lorreta
Kwenda S.
Kyei George B.
Laamarti Meriem
Laamrti Rokaia
Laatiris Abdelkader
Ladhari Hafsia
Lagare Adamou
Laguda-Akingba Oluwakemi
Lahlou Amine Idriss
Lahlou Idriss-Amine
Lahlou Kitane Driss
Lako Richard Lino Loro
Lalemi Mary
Lambisia Arnold W.
Lamboni Lallepak
Lamiae Belayachi
Langat Sombo
Laraqui Abdelilah
Laryea Dennis
Latif Elwaleed M. Elamin Sara A.I
Latifa Anga
Layibo Yasser
Le Viet Thanh
Le-Viet Thanh
Lee Justin
Lee Kwok
Leendertz Fabian
Lefrançois Louise
Lekana-Douki Bernard
Lekana-Douki Sonia
Lell Bertrand
Lelo Eric A.
Lemoine Frederick
Lemtudo Alan
Lesego Kuate-lere
Lesetedi Onalethata
Lessells Richard
Lessler Justin
Leta D.
Leta Dereje
Letaief A.
Levasseur Anthony
Leye Nafisatou
Li Zhenghui
Liberator Paul
Liboro G.
Licastro Danilo
Lieu Vivi Hue-Trang
Lim Efrem S.
Lima Mendonça Maria da Luz
Limbaso Samson Konongoi
Lin L.
Lin Michelle
Lindsey Benjamiin B.
Linh Le Thi Kieu
Lipsi Maria Rosaria
Lissauer Sam
Lissom Abel
Lista F.
Livo Esemu
Liwewe M.M.
Liyai Rehema
Lo Gora
Lo Mamadou Beye Cheikh Ibrahima
Lockman Shahin
Lodiongo Dennis Kenyi
Lojuan Abe
Lokilo Emmanuel
Long Kyle A.
Lontchi Roméo Aimé Laclong
Lorenzo-Redondo Ramy
Loucoubar Cheikh
Lule Daniel B.
Lumembe Raphael
Luo Hu
Luquette Andrea E.
Lusamaki Eddy K.
Lutalo Tom
Lutucuta Silvia
Lutwama Julius J.
Luutu Moses
M'cormack Violette V.
Maaroufi Anderrahmane
Maatoug Taha
Mabika Diane A.
Mabunda Nedio
Mabunda Nédio
MaCauley Jane
Macheke Kutlo
Mad W.
Madeira Carla
Madi W.Y.
Madisa Tumisang
Maeka Kenneth K.
Maes Piet
Magalhães Erica Luis Maria
Magdeldin S.
Magnussen Vanessa
Maharaj Arisha
Mahlakwane Kamela
Mahlangu B.
Mahmoud Galal
Mahmoud Sara
Mahrous N.
Maida A.
Maidane Yakob Gebregziabher
Maiga Almoustapha I.
Maiga Mamoudou
Maiga Zimmerman
Majanja Janet
Makamure Beuty
Makangara Jean-Claude C.
Makhema Joseph
Makiala-Mandanda Sheila
Makki Yousif Rabih
Makori T.
Malabat Christophe
Malagon François
Malaka Christian N.
Malama K.
Malolo I.
Maloum Moustapha Nzamba
Maluzi Kwitaka
Maman Issaka
Manangazira Portia
Mancon Alessandro
Mandomando Inacio
Manene Bulelani
Manga Pasacaline
Manickchund N.
Manneh Jarra
Manneh Paulina Joãozinho da Costa Jarra
Manouana Gédéon Prince
Manraj S. S.
Mansell Chris
Mansour Osama
Mansour T.
Manuel Eusebio
Mapanguy Chastel M.
Maphalala Gugu P.
Maponga Tongai G.
Maqsood Rachel
Marais Gert
Marcello Alessandro
Mareka Mathabo
Margaglione Maurizio
Mari Alfredo
Maria da Costa Edmira
Marie Claire Okomo Assoumou
Marion Amujal
Maritz Jean
Marks Michael
Marondera Blessing T.
Marti-Carerras Joan
Martin Darren P.
Maruapula Dorcas
Marx Jacques
Marycelin Baba
Masahiro K.
Masakwe Clement
Masete Godfrey
Mashe Tapfumanei
Masmoudi Saber
Massinga Arsenia
Mastouri Maha
Mathabo M.
Mathieu Hota
Mathur H.
Matobo Mooko Marethabile
Matshaba Mogomotsi
Matsheka Maitshwarelo I.
Maufrais Corinne
Mavingui Patrick
Mayaphi Sim
Mayor Alfredo
Maïté Soundélé
Mba Nwando
Mbala Placide K.
Mbanne Maimouna
Mbaye Aminata
Mbegnan Coulibaly
Mbembo Guy Paterne Malonga
Mbhele Nokuzola
Mbondoukwe Noé Patrick
Mbongo-Nkama Elvyre
Mboowa Gerald
Mboup Aminata
Mboup Souleymane
Mbow Moustapha
Mbulawa Mphaphi B.
Mbunsu Gabriel K.
Mburu Maureen W.
McAuliffe Gary
McInnis Bronwyn
Mdini Imen
Mdini Ines
Mdlalose K.
Mdlalose Nokukhanya
Mechita Mohcine Bennani
Mehta S.
Melingui Sylvie
Melloul Marouane
Mendes Adriano
Mentag Rahaman A.
Meshack Wadegu
Metha Samar
Mettle Deborah N. A.
Mewono Ludovic
Meyer Philippe Lavrard
Mhalla S.
Mhalla Salma
Mhlanga Gibson
Mhuulu Lusia
Micelli Loris
Micheli Valeria
Michuki George
Mihret Adane
Mihrete A.
Mills Margaret
Mine Madisa
Miranda J.
Mishra Mitali
Mishra Nischay
Misita Collins M.
Mkada Imen
Mmatshepho Phasha-Muchemenye
Mnguni A.
Mnyameni F.
Moatasim Yawo A.
Moeti Matshidiso
Mogga Juma J. H.
Mogotsi M.T.
Mohale T.
Mohale Thabo
Mohamed Aya
Mohamed Chenaoui
Mohamed K.S.
Mohamed Sahra Isse
Mohammed Hajjaji
Mohammed K.S.
Mohammed Khadija Said
Mohammed Oumaima Ait Si
Mohammed Youbi
Mohktar Quaneeta
Mohr Vanessa
Moir Monika
Mokhtar Gomaa
Molenkamp Richard
Momoh M.
Momoh Mambu
Monemou Jean-louis
Monte A.
Monuir G.
Monze M.
Mooko M.
Morais Joana
Morales A.N.
Morang’a Collins M.
More Ayong
Moreira-Soto Andres
Morobe John M.
Morpeth Susan
Morton Ben
Mosepele Mosepele
Mostafa Ahmed
Mostafa Ahmed
Mostafa Khalid Ennibi
Motshosi Patience
Mouad Merabet
Mouallif Mustapha
Mouangala Davy Leger
Mouhssine Hemlali
Mouity Matoumba A.
Moussa Ben
Moustafa Shimaa
Moyo Sikhulile
Mpairwe Bernard
Mphoyakgosi Thongbotho
Mpina Maximillian G.
Mtshali P.
Mubemba B.
Mubichi Ravena
Mudau Innocent
Mufinda M.
Mugabe Muchaneta
Mugisha Joseph
Muhammad Iluoreh Ahmed
Mukadi-Bamuleka Daniel
Mukantwari Enatha
Mukhtar Maowia M.
Mukonka Victor
Mulenga Lloyd
Muleya W.
Muli Collins
Mulonga Kangwa
Mulu Andargachew
Munger Emmanuelle
Munnink Bas Oude
Mupeta F.
Murunga Nickson
Murwira Barbra
Musa Abdualmoniem O.
Musonda Kunda G.
Musyoki Jennifer
Mutai Beth
Mutangana Dieudonne
Mutesa Léon
Muthanje Eric
Mutisya James
Muttaiyah Sharmini
Mutungi Joe
Mutungi Joe K.
Muuo S.N.
Muyembe Francisca M.
Muyembe-Mawete Francisco
Mveang-Nzoghe Amandine
Mvula Bernard
Mwangi Milkah
Mwangi Sarah Wambui
Mwangomba W.
Mwebesa Henry
Mwenda Mulenga
Mwesigwa Savannah
Mwikwabe Nicholas
Mzumara T. E.
N'dilimabaka N.
Nabadda Susan
Nabila Marchoudi
Nabisubi Patricia
Nabli A.
Nadia Touil
Nagel Michael
Nagiub Amel
Naguib A.
Naguib Amal
Naguib Amel
Naidoo Yeshnee
Naija Habiba
Nakaseegu Joweria
Nalubamba K. S.
Namagembe Hamidah
Namulondo Joyce
Nansumba Hellen
Nari Ramon
Naryshkina E.A.
Nasinghe Emmanuel
Natasha Akwii Patience
Nawfel Azami
Ndack Ndiaye
Ndam N.T.
Ndam Nicaise T.
Ndaruhutse Jerome
Ndeboko Bénédicte
NDiaye Anna Julienne Selbe
Ndiaye Birahim Piere
Ndiaye Halimatou Diop
Ndiaye Ndack
Ndiaye Yacine DIA Seni
Ndiour Samba
Ndjolo Alexis
Ndodo Nnaemeka
Ndong Angoune
Ndongo Dia
Ndongo Sola
Nduka Nonso
Ndure Sainabou Laye
Nduwimana Cassien
Ndwiga L.
Neff N.
Negash A.A.
Negash Abel Abera
Nejjari Chakib
Nene Vishvanath
Nepolo Emmanuel
Neto Rodrigues Rosa Maria D. E. S. A.
Neto Z.
Newton Lwanga
Newton Robert
Nfor Rine Zeh
Ngabana Edith N.
Ngoi Joyce M.
Ngole Eitel Mpoudi
Ngomtcho Sen Claudine Henriette
Ngonga Dikongo A.M.
Ngosa W.
Nguema Rodrigue Mintsa
Niama Fabien Roch
Niane Serigne Saliou
Niatou-Singa F. S.
Nicod J.
Niemann Stefan
Niemann Tanja
Nieuwenhuijse David
Niyibigira Jean B.
Niyomwungere Alexis
Njanpop-Lafourcade Berthe-Marie
Njouom Richard
Njuguna John
Nkenfou Celine
Nkengasong John
Nkeshimana Anatole
Nkeshimana Anatole
Nkongho Frédéric
Nkurunziza Jerome
Nkurunziza Jerome
Nkwembe Edith
Nlavo Bonifacio Manguire
Nnaemeka Ndodo
Nokes David J.
Noureddine Dersi
Nourlil Jalal
Nsanzimana Sabin
Nthiga P
Ntoumi Francine
Ntuli N.
Nwako Toy
Nwuba Chiamaka
Nyaga Martin M.
Nyagupe Charles
Nyakarungu Elizabeth
Nyandwi Joseph
Nyataya Josphat
Nyepetsi Dineo Emang Tshiamo. Gape
Nyunja Albert
O'Grady Justin
Obafemi Olufemi
Obiekea Celestina
Obong Abasi Ene
Ochola Stephen
Ochola-Oyier Lynette I.
Ochwoto M.
Oderinde Bamidele S.
Odewale Ebenezer
Odia Ikponmwosa
Odoom John K.
Odugbemi Moyinoluwa
Ofori-Boadu L.
Ofula Victor
Ogah Onwe E.
Ogunbayo Emmanuel
Ogunsanya Olusola A.
Oguntope Sobajo
Oguzie Judith U.
Ojo Olajumoke
Ojok Lul Deng
Okeyo Seth
Okoi Catherine
Okokhere Peter O.
Okoli Leona
Okolie Johnson C.
Okomo Marie Claire
Okwuraiwe Azuka Patrick
Olabisi Olabisi
Olawoye Idowu B.
Olfert L.
Oliver-Commey Joseph
Olorunnimbe Subomi
Olubayo Luicer
Oludayo Ope-Ewe
Oluniyi Paul E.
Oluwapelumi Adeyemi O.
Oluwasemowo Olukunke
Omar S.
Omilabu S.
Omoruyi Chukwuma E.
Omunakwe Hannah E.
Omuoyo Donwilliams O.
Omuseni Esther
Ondo Georgelin Nguema
Ondoa Pascale
Ongera E.
Ong’era Edidah M.
Oni Grace
Onikepe Folarin
Onwuamah C.K.
Onwuamah Chika K.
Onywera Harris
Opanda Silvanos Mukunzi
Ope-Ewe O.
Orsini Emanuele
Osei-Wusu Israel
Osiany Shebbar
Osman Ikram Omar
Oteng F.
Otieno Edward
Otuonye Ngozi Mirabel
Ouadghiri Ouna
Ouangole Garba
Ouangraoua Soumeya
Ouedraogo Abdoul-Salam
Ouedraogo Léopold
Ouedraogo Saïdou
Ouffoué Kra
Ouma Ahmed E. O.
Oumzil Hicham
Ouro-Medeli Alassane
Ousmane Faye
Ouso Daniel
Owaka Samwel
Owusu Michael
Owusu-Nyantakyi C.
Oyefolu A.
Oyola Samuel O.
Ozer Egon A.
O’Grady Justin
Pacome Monemo
Padane Abdou
Padzys Guy Stéphane
Page Andrew J.
Paixão Paulo A. Carralero R.R.
Pallerla Srinivas Reddy
Palomba S.
Pambou Mangombi
Panja L.
Park D.
Park Danny
Parker Mathew D.
Pascal Butoyi
Patel H.
Patoo M.
Patrizio Maria Pia
Pattoo M.
Pauthner Matthias
Paye Marietou F.
Pedro Afonso
Peeters Martine
Pentikainen Ndumbu
Pereira A.
Pereira Rei José
Perez Hermes
Permal Emmanuelle
Peyrefitte Christophe
Phan My V. T.
Philip C.
Phillips Richard O.
Philomena Eromon
Phiri Isaac
Phiri Philip Wonder
Pillay Sureshnee
Pisanelli Daniela
Playle Veronica
Poda Armel
Pool Brigitte
Popoola
Povogui Moriba
Pratt Catherine B.
Preiser Wolfgang
Prince-David Mireille
Prosolek Sophie
Puente Manoli Torres
Quansah E.B.
Quansah Evelyn Bonney
Quashie P.
Quashie Peter Kojo
Quedraogo Rabia
Rachakonda Sivaramakrishna
Rachid Benhida
Rafai Clotaire Donatien
Rafaï Clotaire D.
Ragomzingba Frank E. Z.
Raharinosy Vololoniaina
Rahoui Jalila
Raimond Petra
Ramadan Dalia
Ramaologa Sefetogi
Ramphal Upasana
Ramphal Yajna
Ramuth Magalutcheemee
Ranaivoson Christian
Ranaivoson Hafaliana C.
Randriambolamanantsoa Tsiry
Raouf A.
Raoult Didier
Rasmussen David A.
Razafimanjato Helisoa
Razanajatovo Norosoa H.
Rebai Ahmed
Reggad Ahmed
Regragui Zakia
Rehn A.
Ren Xiaoyun
René Keke K.
Reuben Sindayiheba
Reynders Marijke
Reynolds Steven J.
Rhajaoui Mohamed
Rick S.
Rigby Jonathan
Rizgalla Elham
Rizzo Alberto
Roberts Sally
Rodrigues Nadia
Rogers J.
Rogers Matthew
Rollo Tiziana
Roloff Tim
Roshdy W.H.
Roshdy Wael H.
Roychoudhury Pavitra
Rubin Sarah
Rudder Steven
Rufael Tesfaye
Ruhweza Simon Peter
Rujeni Nadine
Rumunu John
Rutayisire Robert
Saad M.A.
Saasa Ngonda
Sabeti Pardis C.
Sadeuh-Mba Serge Alain
Sadji
Sadji Adodo
Sadji Y.A.
Safer Mouna
Safietou Sankhe
Sahr Dumbuya Foday
Sahr P.F.
Saibu J.O.
Saiid S.
Saiid Samirah
Saizonou Raoul
Sakho Moustapha
Salah D.
Salah Djimabi
Salah H.
Salako Babatunde L.
Salama Abdullah
Saleh A.A.
Saleh M.
Salifou Sourakatou
Sall Amadou A.
Sall Amadou Alpha
Salma Loukman
Salou M.
Salou Mounerou
Salu O.B.
Samaté Dianke
Sambou Masse
Samir M.
Samir O.
San James E.
Sanaa-amine Alaoui
Sander Anna-Lena
Sanders Kevin
Sandi John D.
Sangare Abdoul K.
Sangaré Abdoul Karim
Sangaré Lassana
Sankhe Safietou
Sankhe Safietou
Sanyang Bakary
Sathees Saraswathi
Sathyendran Vani
Savaliya Nitin
Sawa H.
Sawadogo Yacouba
Sayed Ahmed
Sayed Salma
Sbabou Laila
Schaffner Stephen F.
Scharnberg Jasmin
Scheepers Cathrine
Schindler Tobias
Schlotterbeck Jasmin
Schneider Julia
Schubert Grit
Seadawy M.G.
Seadawy Mohamed
Seadawy Mohamed G.
Seadawy Mohamed Gomaa
Sedjro Eclou
Seffar Myriam
Sekhsokh Yassmin
Selekon Benjamin
Semanda Patrick
Sena Awunyo
Sene Pauline Yacine
Serrano Laetitia
Seru Kedumetse
Sesay Abdul K.
Seth-Smith Helena
Seyoum Tamrayehu
Shabaan Abd Elazeez
Shaffer Jeffrey G.
Shaibu Joseph Ojonugwa
Shalaby L.
Shama Abo
Shamel Mohamed
Shapiro Roger
Shawky Shereen
Shcherbakova S.A.
Shehata Mahmoud
Shemis Mohamed
Sherwood Jill
Shevtsova A.P.
Shibemba Aaron L.
Shiningavamwe Andreas
Shipingana Loide
Shobayo Bode
Shoka Abd Moniem Ain
Shrestha Lasata
Shumba Edwin
Si Huiqing
Siawaya Joel Fleury Djoba
Siddle Katherine J.
Siedner Mark
Siegfried Nandi
Sigei Faith
Sijuwola Ayotunde E.
Sikkema Reina
Silander Olin
Siliadin Akoele
Silochi Nelson Boricó
Simbi Rajiha
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Simons Lacy M.
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Singh Lavanya
Sinyange N.
Sisay Abay
Sitharam Nikita
Sitoe Nadia
Sivro Aida
Skarwan Emilio
Skidmore Peter T.
Smeti Ibtihel
Smit Erasmus
Smith-Lawrence Pamela
Smyej Imane
Soara Nabila
Sobajo Tope
Soglo Philip M.
Sogodogo Heitzer
Sogodogo Sokhna
Sokei Judith
Sokhna Cheikh
Soliman Hany K.
Soliman May Sherif
Soliman Shaimaa
Somboro Anou M.
Somé Arsène
Sonoo Janaki
Sorie Foday Sahr Samuel
Sorie Samuel
Sosedova E.A.
Souiri Amal
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Souma Zein
Soumah Abdoul Karim
Souopgui Jacob
Sourakatou Salifou
Sow Abdourahmane
Sow Mamadou Saliou
Ssemwanga Deogratius
Ssewanyana Isaac
Ssuuna Charles
Stambouli Nejla
Stander Tania
Stange Madlen
Stanley Sarah
Stefanov Emily K.
Stoecker Kilian
Storey Matt
Strydom Amy
Subramoney Kathleen
Sujeewon C.
SULAIMAN Mariam Kehinde
Sule Waidi
Sun Fengming
Swanson Kena
Sylvanus Okogbenin
Sylverken Augustina A.
Symeker S.L.
Symekher Samwel Lifumo
Tagajdid Rida
Taha A.G.
Taha Ahmed
Taha Chouati
Taiwo Babafemi O.
Takada A.
Takawira Faustinos T.
Takawira Tatenda
Takou Desire
Taloa K.A.
Tamfum Jean-Jacques M.
Tan M.
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Tarnagda Zekiba
Tarupiwa Andrew
Tatfeng Mirabeau Y.
Tato C.
Tato Cristina M.
Taweh Fahn M.
Tayachew Adamu
Tayimetha Carolle Yanique
Taylor Susan
Tchibozo Carine
Tchoudjin Herve Christian Paho
Tebeje Yenew K.
Tefelo Thela
Tefera D.A.
Tefera Dessalegn Abeje
Tegally Houriiyah
Tegomoh Bryan
Tegueni Kokou
Tei-Maya
Teka Gizaw
Tembo John
Tesfaye Abraham
Tesfaye Gelanew
Tesfaye Kassahun
Tessema Sofonias K.
Testimony Olumade
Thiam Aminata Sileymane
Thilliez Gaetan
Thiongo K.
Thomas Van L.
Tia Alie
Tinto Halidou
Tollera Getachew
Tombolomako T. B.
Tomkins-Tinch C.
Tomori Oyewale
Tongo Marcel
Top Ndeye Marieme
Tordo Noël
Toure Abdoulaye
Touré Bamba Fatoumata
Touzani Charifa Drissi
Touzani Otmane
Trabelsi Sameh
Traoré
Traoré Adjaratou
Treurnicht Florette
Triki H.
Triki Henda
Trotter Alexander J.
Tsegay Yao
Tshiabuila Derek
Tsiry R.
Tsofa Benjamin
Tuki Keyru
Tumedi Kefentse A.
Turki M.
Tushabe Phionah
Tuyisenge Patrick
Tyers Lynn
Uche Peace O.
Ugwu C.A.
Ulrich M.
Umumararungu Esperance
Umuringa Jeanne d’Arc
Upton Arlo
Ushijima Yuri
Ussher James
Utpatel Christian
Uwanibe Jessica N.
Uwituze Arlene
van der Eijk Annemiek
van der Linden Anne
van der Linden Antje
van der Werf Sylvie
Van Rooyen G.
van Rooyen Gerhard
van Wyk Stephanie
van Zyl Gert U.
Vanaerschot M.
Vanmechelen Bert
Vanpeene Maud
Velavan Thirumalaisamy P.
Venter Marietjie
Vernet Marie-Astrid
Viana R.
Vickos U.
Victoir Kathleen
Vida Ahyong
Vidal Nicole
Viegas Sofia
Vincent Grace
Vinze Anika
Voegtly Logan J.
von Gottberg Anne
Waberi Zeinab Ali
Wadi Amira Suliaman
Wadonda N.
Wadula J.
Wagner Philipp
Wahab Kolawole Wasiu
Waitumbi John
Walter Mathias C.
Wamala Joseph F.
Wandera Dennis N.
Wang Jing
Wang Xiuhua
Wani Gregory
Wanjohi Dorcas W.
Wanok Stephen
Waruhiu C.N.
Waruhiu Cecilia
Wasfi Fares
Watters Chaselynn M.
Wawina-Bokalanga Tony
Wayengera Misaki
Wayoro Oby
Webby R.
Webby Richard
Weldemariam A.G.
Weldemariam Atsbeha G.
Werno Anja
Wiley Michael R.
Wilkinson David
Wilkinson Eduan
Williamson Carolyn
Wilson Shannon
Woelfel R.
Wohl Shirlee
Wolh S.
Wolter Nicole
Wuduri Zara
Wulf Ben
Wurie I.
Wurie Isatta
Xavier Joicymara S.
Xiang Zuzheng
Xie Hong
Yadouleton Anges
Yadouleton Yahya
Yakout Mostfa
Yandoko Rivalyn Nakoune
Yang Qi
Yao Kouadio T.
Yassine Kasmi
Yassine Zouheir
Yasuda Jiro
Yatassaye Bouna
Yeboah C.
Yeboah Richmond
Yeboah-Manu Dorothy
Yemi Bright K.
Yiaba Cyrus
Yiaba Warren Cyrus
Yu Popova A.
Yusuf Nyam Itse
Yusuf Yacob Mohamed
Zablon J. Matoke D.
Zablon J.O.
Zaher Tarek Refaat Elnagdy Raafat
Zahra El Ansari Fatima
Zahran Manal Hamdy
Zekri Abdel-Rahman N.
Zhang J.
Zhou Pei
Zinyowera Sekesai
Zong Minko O.
Zongo Arsène
Zorgani A.
Zouaki Amal
Zulu P.
Zumla Ali
Zumla Alimuddin
Zuze Boitumelo
Publication venue: 'American Association for the Advancement of Science (AAAS)'
Publication date: 07/10/2022
Field of study

INTRODUCTION Investment in Africa over the past year with regard to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) sequencing has led to a massive increase in the number of sequences, which, to date, exceeds 100,000 sequences generated to track the pandemic on the continent. These sequences have profoundly affected how public health officials in Africa have navigated the COVID-19 pandemic. RATIONALE We demonstrate how the first 100,000 SARS-CoV-2 sequences from Africa have helped monitor the epidemic on the continent, how genomic surveillance expanded over the course of the pandemic, and how we adapted our sequencing methods to deal with an evolving virus. Finally, we also examine how viral lineages have spread across the continent in a phylogeographic framework to gain insights into the underlying temporal and spatial transmission dynamics for several variants of concern (VOCs). RESULTS Our results indicate that the number of countries in Africa that can sequence the virus within their own borders is growing and that this is coupled with a shorter turnaround time from the time of sampling to sequence submission. Ongoing evolution necessitated the continual updating of primer sets, and, as a result, eight primer sets were designed in tandem with viral evolution and used to ensure effective sequencing of the virus. The pandemic unfolded through multiple waves of infection that were each driven by distinct genetic lineages, with B.1-like ancestral strains associated with the first pandemic wave of infections in 2020. Successive waves on the continent were fueled by different VOCs, with Alpha and Beta cocirculating in distinct spatial patterns during the second wave and Delta and Omicron affecting the whole continent during the third and fourth waves, respectively. Phylogeographic reconstruction points toward distinct differences in viral importation and exportation patterns associated with the Alpha, Beta, Delta, and Omicron variants and subvariants, when considering both Africa versus the rest of the world and viral dissemination within the continent. Our epidemiological and phylogenetic inferences therefore underscore the heterogeneous nature of the pandemic on the continent and highlight key insights and challenges, for instance, recognizing the limitations of low testing proportions. We also highlight the early warning capacity that genomic surveillance in Africa has had for the rest of the world with the detection of new lineages and variants, the most recent being the characterization of various Omicron subvariants. CONCLUSION Sustained investment for diagnostics and genomic surveillance in Africa is needed as the virus continues to evolve. This is important not only to help combat SARS-CoV-2 on the continent but also because it can be used as a platform to help address the many emerging and reemerging infectious disease threats in Africa. In particular, capacity building for local sequencing within countries or within the continent should be prioritized because this is generally associated with shorter turnaround times, providing the most benefit to local public health authorities tasked with pandemic response and mitigation and allowing for the fastest reaction to localized outbreaks. These investments are crucial for pandemic preparedness and response and will serve the health of the continent well into the 21st century

LSTM Online Archive

HAL-IRD

HAL-Pasteur

Genomic Characterization of Methicillin-Resistant Staphylococcus aureus (MRSA) by High-Throughput Sequencing in a Tertiary Care Hospital

Author: May Sherif Soliman
Publication venue: 'MDPI AG'
Publication date: 17/10/2020
Field of study

Methicillin-resistant Staphylococcus aureus (MRSA) strains are associated with serious complications and poor clinical outcome. In Egypt, they contribute to more than 70% of S. aureus healthcare-associated infections. This study combined whole-genome sequencing, bioinformatics, and statistical analyses to identify the phylogeny, resistome, virulome and potential genotype–phenotype–clinical correlation among 18 clinical isolates of MRSA in a tertiary hospital in Cairo, Egypt. The ST1535-V MRSA clone was the most frequently isolated (16.6%), followed by ST5-VI, ST1-V and ST239-III (11.1% each). SCCmec V, VI, IV and III types were detected at frequencies of 50%, 16.6%, 11.1% and 11.1%, respectively. None of the tested virulence genes were detected in all isolates, but they ranged in distribution from 1/18 to 17/18. The Panton–Valentine leukocidin (PVL)-encoding genes were detected in only four isolates and were enriched in isolates causing non-severe cases. Phylogenetic analysis revealed relatedness between three ST1535-Vs, two ST5-VIs, two ST239-IIIs and two ST1-Vs; however, only the two genetically related ST1-V isolates were epidemiologically linked. While disease outcome and source of infection had no correlation with a particular genotypic pattern, the sequence type was the most correlated factor with phylogeny and genotypic patterns, and a few genes were associated with non-severe cases

Multidisciplinary Digital Publishing Institute

International Nosocomial Infection Control Consortium report, data summary of 50 countries for 2010-2015: Device-associated module

Author: A. Ahmad Zaatari
A. Ahmed
A. Alves De Oliveira
A. Anirban Karmakar
A. Anwar Al Souheil
A. Argüello-Ruiz
A. Azim
A. Bat-Erdene
A. Bhakta
A. Borgi
A. Bouziri
A. Cerero-Gudino
A. Chawla
A. Dagys
A. Dilek
A. Dwivedy
A. Engin
A. Flores-Alvarado
A. Florin-Rogobete
A. Gashi
A. Gunduz
A. Kaya
A. Kubler
A. Lagares-Guzmán
A. Lesnakova
A. Martínez
A. Molkov
A. Mubarak
A. Oncul
A. Ozgultekin
A. Palaoro
A. Patil
A. Poojary
A. Ramazanoglu
A. Romani
A. Romario-Mendes
A. Sasidharan
A. Simic
A. Solano-Chinchilla
A. Thakur
A. Willke
A. Zamores-Pedroza
A.A. Zeggwagh
A.C. Bianchi
A.M. Elansary
A.M. Mathew
A.M. Mohamed
A.M. Montanini
A.M. Ríos
A.N. Manked
A.N. Yalcin
A.P. González
A.R. Vargas-García
A.S.K. Rillorta
A.V. Dharan
Aamer Ikram
Abd El Moniem Moustafa
Abdulrahim Al Khamis
Abeer A. Omar
Abeera Ahmed
Adnan Soliman Alsaadi
Ahmad Mahmoud Ali
Ahmed Abdoh Al-Jarie
Ahmed Hasanin
Ainul Auzani Othman
Aisha Hassan Mutwalli
Alejandra Sepulveda-Chavez
Ali Pekcan Demiroz
Aliza Mohamad Yusof
Amani Ali El-Kholy
Ameena Isa Alsayegh
Ana Marcela Quesada-Mora
Ana P. Dy
Anahita Sanaei
Anamma Philip
Andrew Trotter
Anil Kumar Bilolikar
Anis Siham Zainal Abidin
Anjeela Koirala
Anna Lyn N. Tajanlangit
Antoine Abdel Messih
Anucha Apisarnthanarak
Anuja Kulkarni
Anumol Thomas
Anuradha Agarwal
Anuradha Sriram
Arnab Dasgupta
Arnefelina S. Tamayo
Arul Rose Suganya
Arwa Ramadan
Ashraf Elhoufi
Ashraf Kelany
Ashwin Kumar Mani
Asmita Sakle
Asuman Inan
Athena Manao
Aun Raza
Azra Parveen
B. Barteczko-Grajek
B. Cano-Munoz
B. Dragan
B. Herrera
B. Ramachandran
B.A. El Awady
B.E. Hernandez-Chena
Babu K. Abraham
Baby Padmini
Banambar Ray
Basak Ceyda Meco
Basanta Kumar Pati
Bat Erdene Ider
Batsaikhan Narankhuu
Batsuren Choijamts
Battsetseg Tuvdennyam
Behzad Maghsudi
Bhaskar Narayan Chaudhury
Bijie Hu
Biraj Mohan Mishra
Braulio Matias De Carvalho
Burhan Q. Jawadwala
Byambadorj Batkhuu
C. Aygun
C. Becerik
C. Bulut
C. Cevallos
C. Daliborca Vlad
C. Domínguez
C. Díaz
C. Fernandes-Valente
C. Linares
C. Pelaez
C. Rodrigues
C. Santos
C. Uzun
C. Wang
C. Ávila-Acosta
C.C. Carreon-Martinez
C.E. La Hoz Vergara
C.F. Linares-Calderon
C.G. Rodríguez
C.G. Silva
Carlos Alvarez-Moreno
Chin Seng Gan
Chirag Modi
Chirag Patel
Cigdem Ataman Hatipoglu
Cigdem Yildirim Guclu
Cristina Mari Jean P. Llames
D. Azevedo-Ferreira Lima
D. Azevedo-Pereira
D. Enkhtsetseg
D. Escudeiro
D. Galishevskiy
D. Grinkeviciute
D. Lekic
D. Moreno
D. Muntean
D. Ozdemir
D. Sandesc
D. Santofimio
D. Ugurcan
D. Yepes-Gomez
D. Yildizdas
D.A. Marin-Tobar
D.K. Khanna
D.M. Hassan
D.M. Maurizi
D.M. Rivera
D.P. Mazo-Elorza
D.Q. Quintana
Daisy Aguilar de Moros
Dale Fisher
Dang Thi Van Trang
Dao Quang Minh
Dao Xuan Co
Dedeepiya Devaprasad
Deepa Divekar
Deepesh G. Aggarwal
Denis Padgett
Dhaffer Moghram Alamri
Dinh Pham Phuong Anh
Doaa Abd El Aziz
Dolatsinh Zala
E. Alcala-Martinez
E. Azak
E. Bogdanowicz
E. Garcia-Mayorca
E. Gonzalez-Diaz
E. Guclu
E. Hristozova
E. Jara
E. Ramirez
E. Rodriguez-Noriega
E. Sachez
E.A. Medeiros
E.B. Santiago
E.D. Kostadinov
E.E. Coello-Gordon
E.G. Castaño
E.G. Chapeta-Parada
E.M. Onzi-Siliprandi
E.P. Cruzpero
Edwin Pathrose
Eleni Apostolopoulou
Esmeray Mutlu Yilmaz
Estuardo Salgado-Yepez
Ever Labro
F. Aguiar-Leitao
F. Corona-Jimenez
F. Perez
F. Picoita
F. Sebnem-Erdinc
F. Serpa-Maia
F. Sirmatel
F. Ulger
F. Valencia
F.M. Guerra-Infante
F.M. Guerrero-Toapant
F.M. Ramírez Wong
F.M. Rebello
F.O. Riera
Fadzlina Abdul Aziz
Fahad Ahmed Sawan
Faisal Sultan
Farid Zand
Fatema Hasan Yaseen
Fatima Abdullah Al Qasmah
Fazil Abubakar
Felcy Chacko
Ferhat Sari
Filiz Kizilates
Florin George Horhat
Foong Kit Weng
G. Aguirre-Avalos
G. Arteaga-Troncoso
G. Assuncao-Ponte
G. Batjargal
G. Bayasgalan
G. Benchetrit
G. Camacho-Moreno
G. Ceylan
G. Ersoz
G. Kaya
G. Leon-Garnica
G. Martinez-Falcon
G. Ristic
G. Santacruz
G. Senol
G. Song
G. Spahija
G. Usluer
G. Ye
G. Álvarez
G.A. Muñoz-Gutierrez
G.D. Empaire
G.E. Roncancio-Vill
G.J. Chaparro
G.M. Montenegro-Orrego
G.S. Gehlot
G.Y. Ramos-Ortiz
Gabriela Di Silvestre
Gautam Khanna
Gloria Y. Ramos-Ortiz
Golnar Sabetian
Gortap Sitohang
Gunay Tuncer Ertem
H. Ayash
H. Coronado-Magana
H. Gonzalez
H. Turgut
H. Vidal
H. Yilmaz
H. Yu
H.A. Delgado-Aguirre
H.K. Sale
H.R. Perez-Gomez
H.R. Sandoval-Castillo
Haeel Alabdaly
Haifaa Hassan Almousa
Hail M. Al-Abdely
Hajer Am Al-Dossary
Hakan Leblebicioglu
Hala Ahmed
Hala Hamza
Hala Mounir Agha
Hala Roshdi
Halima Yahia Al-Alkami
Hana Hanafi
Hasan Agin
Hasimah Zainol
Hassan Eisa Ammari
Hatem Mohd Al Hani
Hatice Cabadak
Hector Miguel Telechea
Hindra Irawan Satari
Hulya Sungurtekin
Humberto Guanche-Garcell
Humeyra Zengin
Hussain Alrahma
I. Calvo-Hernández
I. Devrim
I. Erdem
I. Ozgunes
I. Perez
I. Zeid
I.A. Valderrama-Marquez
I.E. Sosa-Gonzalez
Ibrahim A.M. Alzaydani Asiri
Indranil Roy
Inşa Gul Ekiz Işcanlı
Islam Abdullorziz Ghazi
J. Dos Anjos-Lima
J. ElKholy
J. Eremija
J. Kojovic
J. Mueras-Quevedo
J. Olszewski
J. Osorio
J. Pichilingue-Chagray
J. Rodriguez-Pacheco
J. Tannous
J. Vimercati
J.A. Galindo-Olmeda
J.A. Lopez-Pulgarin
J.A. Navoa-Ng
J.C. López
J.C. Mijangos-Mendez
J.D. Fortin
J.E. Desse
J.E. Ruiz-Gallardo
J.I. Marín-Uribe
J.J. Ayala-Gaytan
J.L. Moreno-Castillo
J.M. Ballinas-Aquino
J.O. Ospina-Martínez
J.P. Stagnaro
J.P. Stagnaro
J.R. Rojas
J.V. Divatia
Jayant Shelgaonkar
Jeffrey Asidera Mendoza
Jehangir Sorabjee
Jincy Eappen
Jomol Philipose
Joy Ola Selga
Justin Mathew
Jyotishka Pal
K. Abidi
K. Angelova
K. Berechid
K. Gomez-Nieto
K. Harten Pinto Coelho
K. Liu
K.F. Aibar-Yaranga
K.H. Chuluunchimeg
Kamal Bashar Abu Bakar
Karthikeya Varma
Kashmira Limaye Joshi
Katarina Furova
Katerina Jankovska
Katja Popovska
Kavita Sandhu
Khalid Mohammed Ghalilah
Kushlani Jayatilleke
L. Josph
L. Lara
L. Maroto-Vargas
L. Meneses-Ovallos
L. Montes-Bravo
L. Nikolic
L. Pushparaj
L. Ramasco
L. Song
L. Zamorano-Flores
L.D. Bergosa
L.D. Burgos-Florez
L.F. Alves De Lima
L.G. Salvio
L.I. Castillo-Bravo
L.M. Canas-Giraldo
L.M. Santivanez-Monge
L.N. Pazmino
L.S. Marcos
L.Y.M. Rincon
Lakshmi Ranganathan
Lateefa Fardan Hani
Le Thi Anh Thu
Le Thi Diem Tuyet
Le Thi Thu Nguyet
Leide Shyrine Redito
Lucy Chai See Lum
Luis Kushner-Davalos
Lul Raka
M. Al-Alawi
M. Altindis
M. Amaral-Almeida Costa
M. Andrade-Oliveira-Reis
M. Arboleda
M. Bernan
M. Bhattacharyya
M. Bjelovic
M. Bri Saibala
M. Caridi
M. Cengiz
M. Chakravarthy
M. De Guzman
M. Dorj
M. Furman
M. Girvan
M. Gonzalez-Martinez
M. Karpagam
M. Kasten-Monges
M. Lascano
M. Licker
M. Lopez-Hurtado
M. Lozano
M. Mansour
M. Mehmet Bakir
M. Mendonca
M. Meric
M. Mikaszewska-Sokolewicz
M. Moreira
M. Oral
M. Ozcelik
M. Papurica
M. Ramírez
M. Rodriguez
M. Sanchez-Vargas
M. Sunbul
M. Valverde-Hernandez
M. Vargas
M. Ximenes-Rocha Batista
M. Zielinska
M. Zurawska
M.A. Altuzar-Figueroa
M.A. Cureno-Diaz
M.A. Zuniga
M.C. Culebro-Burguet
M.C. Oyola
M.C. Rodríguez
M.C. Sg-Buenaflor
M.E. Gomez
M.E. Guzman Siritt
M.E. Sanchez-Castuera
M.F. Garcia
M.F. Geyik
M.F. Trajano
M.G. Manuel
M.G. Miranda-Novales
M.I. Rojas-Bonilla
M.J. Mayorga-Espichan
M.L. Maciel-Canuto Amaral
M.L. Spadaro
M.L.G. Rosario-Tueros
M.M. Bovera
M.M.A. Haleim
M.N. Sivakumar
M.O. Gamar-Elanbya
M.S. Olivieri
M.T. Mendoza
M.T. Tenorio
M.V. Changano-Rodriguez
Madhav Lavate
Madhavi Latha
Madhupriya Suryawanshi
Maithili Kavathekar
Manal Mansour Al-Gethamy
Manoj Kumar Agarwal
Mansoor Masjedi
Maria Carmen S.G. Buenaflor
Maria Khan
Marjory Madco
Marzida Mansor
Masoud Alebouyeh
May Abdel Fattah
May Osman Gamar Elanbya
Mayur Patel
Mazuin Kamarul Zaman
Mehul Shah
Mervat Aldalaton
Mervat Elanany
Michael M. Petrov
Milena Petrovska
Modhi Alkhamaly
Mohamad Fadhil Hadi Jamaluddin
Mohammad Masfar
Mohammed Ahmed Ali Karrar
Mohd Shahnaz Hasan
Mohit Kharbanda
Mona Foda Salama
Mrinmoy Bej
Mrunalini Potdar
Munayfa Musallam Al Azmi
Myrna Lim Quisai
Myrna Misador Torres
N. Al Zharani
N. Al-Abdullah
N. Alquinga
N. Baftiu
N. Barahona-Guzmán
N. Ben-Jaballah
N. Elaldi
N. Gad
N. Gita
N. Jaggi
N. Kuyucu
N. Madani
N. Navarrete
N. Orozco
N. Oztoprak
N. Ramakrishnan
N. Saini
N. Sen
N. Unal
N. Yasar
N.E. Salazar-Ramirez
N.K. Pawar
N.K. Zahreddine
N.P. Rao
Nadeem Paul
Nader Ahmed Tawfic
Naglaa Mahmoud Abdo
Naheed Elahi
Najla Ben Jaballah
Namphon Supa
Naranpurev Mendsaikhan
Nargis Daud
Nashwa Elsayed
Nawal Salah Abdulkhalik
Nehad Abdulshakour Bugis
Neilia Cardinal Ariola
Nepomuceno Mejia
Nesreen Alghosn
Ngo uy Chau
Nguyen Gia Binh
Nguyen Phuc Tien
Nguyen Quoc Anh
Nguyen Viet Hung
Nidal Tashkandi
Nikhil Modi
Nirav Pandya
Nisith Mohanty
null Kehkashan
null Sijo
null Tsuyanga
null Velupandi
Nurettin Erben
Nuri Bayram
O. Chavarria-Ugalde
O. Coskun
O. Mancera-Paez
O.G. Ramires
O.P. Javellana
O.S. Espinosa
Oguz Dursun
Oguz Karabay
Otgon Baatar
Ovidiu Horea Bedreag
Ozden Ozgur Horoz
Ozge Turhan
Ozlem Sarac Sandal
P. Botta
P. Mathur
P. Saul
P. Suvderdene
P.A. De Vera
P.A. Rios-Arana
P.D. Juarez
Phan Thi Hang
Pooja Thakkar
Pornpheth Prasan
Pradnya Joshi
Prafulla Kumar Sahoo
Pravin Kumar Nair
Priyadarshini Senthil Kumar
Priyanka Patil
Purnima Mukherjee
Purvi Shah
R. Abouqal
R. Ahmadieh
R. Amaral De Moraes
R. Cabrera-Montesino
R. De Leon-Escobedo
R. Fouda
R. Kelkar
R. Kevalas
R. Li
R. Ortega
R. Penuliar
R. Popescu
R. Rocha-Vasconcelos Carneiro
R. Ruiz-Rendon
R. Salas-Flores
R. Sukanya
R.H. Pérez
R.R. Maglente
R.S. Campos-Uchoa
R.V. Lozada
Radhika Krishnan
Raed Hassan Al Shehri
Raha Abdul Rahman
Rajalakshmi Arjun
Rajesh Chawla
Ram Gopalakrishnan
Ramesh Venkataraman
Rasha Hamed El-Sherif
Rasha Nour Aldeen Jaha
Rashmi Giri
Ravikumar Krupanandan
Rayo Morfin Otero
Recep Tekin
Reham H.A. Yousef
Reny Thomas
Reshma Tejam
Retno Kadarsih
Rhea Lynn Cresencia
Rhendra Hardy Mohamad Zaini
Richa Misra
Ritesh Debroy
Rosliza Zhazali
Rungratchanee Pimathai
S. Al Qahtani
S. Baigalmaa
S. Basu
S. Bekeit
S. Biswas
S. Esparza-Ahumada
S. Gerah
S. Gualtero
S. Hlinkova
S. Petersen-Morfin
S. Raut
S. Sahu
S. Saranya
S. Shah
S. Shetty
S. Singh
S. Singh
S. Valderrama
S. Vega-Gonzalez
S.A. Aguirre-Diaz
S.C. Do Nascimento
S.D. Grecu
S.J. Ramos
S.K. Patnaik
S.K. Todi
S.L. Romero-Torres
S.M. George
S.M. Pulido-Leon
S.N. Myatra
S.S. Dalal
Saban Esen
Safa A Aziz AlKhawaja
Sajith Narayanan
Saleh Fakher Sowar
Samana Sainju
Sameh Twfik
Sana Yusuf
Sanghamitra Mishra
Sanjith Saseedharan
Sankar Sengupta
Sarah Hassan Al Faraj
Sasheela Sri La Sri Ponnampala
Saswati Sinha
Seelas Blessymole
Seema Rohra
Selvi Yener Erdogan
Senthilkumar Rajagopal
Serhat Unal
Sevim Karacorlu
Shanta Mukherjee
Sharmila Sengupta
Sheeba John
Shefali Bhattacharya
Sherin El-Sherbiny
Sinchan Bhattacharyya
Siti Jhulmina B. Alih
Snezana Tufekcievska Guroska
Soad Khamis
Solita Briones
Somayeh Jahani Sherafat
Sonali Vadi
Soo Lin Chuah
Souha Sami Kanj
Subhash Prasad Acharya
Subodh Kumar
Sudha Kansal
Sudhjan Misra
Sudipta Bhattacharyya
Suha Sen
Suha Sen
Suhas Nirkhiwale
Suja Thomas
Sujit Kar Purkayastha
Sujoy Mukherjee
Summiya Nizamuddin
Sunil Sharma
Suresh Kumar
Suthinee Wanitanukool
Suwara Somabutr
Suzan Sacar
Syed Zahid Bukhari
T. De Jesus Pinheiro-Bandeira
T. Kardas
T. Khajidmaa
T. Kondratas
T. Liu
T. Mahfouz
T. Mapp
T. Moreira-Matos
T. Singhal
T. Sohanlal
T.M. Lima-De Barros Araujo
Tahira Anwar Magray
Tanja Anguseva
Tarek Dendane
Tariq Saad Abdulhadi Alotaibi
Thara Francis
Thejasvini Anand
Tran Thi My Hanh
Tran Thi Thuy Hang
Truong Anh Thu
Tsolmon Begzjav
Uma Gopal
Umesh Gupta
Usha Nair
V. Bayani
V. Bermudez
V. Chediack
V. De Iturrado
V. Delgado
V. Dumitrascu
V. Gaona-Flores
V. Kothari
V. Ramírez
V. Tanzi
V. Venkateshwar
V.A. Marquez-Mondalgo
V.A. Monroy-Colin
V.A. Velinova
V.J. Dicheva
V.L. Machado-Silva
V.M. Moreno-Mejia
Vaidotas Gurskis
Valsa Thomas
Vesna Mioljevic
Vineya Rai
Vini Kantroo
Vladislav Belskiy
Vo Thi Hong Thoa
Volkan Yarar
Víctor Daniel Rosenthal
W. Chilon
W. Raigoza-Martinez
W. Villamil-Gomez
W.M. Santos Monteiro
Wael Abdulrahman Abdulatif
Waleed Mohd Hussain
Walter Enrique Prudencio Leon
Wan Fadzlina Wan Mohd Shukeri
Wan Nazaruddin Wan Hassan
Wan Nurbayah Wan Yusoff
Wan Rahiza Wan Mat
Wieslawa Duszynska
Wynndale Mae Demotica
X. Guo
X. Yang
Y. Arreza-Galapia
Y. Ruiz
Y. Yang
Y.A. Pardo-Lopez
Y.M. Abdelhamid
Y.S. Elkholy
Yassir Khidir Mohamed
Yatin Mehta
Yeliz Oruc
Yusuf Sahip
Z. Ariyasuren
Z. Cruz-Rivera
Z. Duran-Gil De Anez
Z. Hammoud
Z. Kanafani
Zan Mitrev
Zaneta Bogoevska Miteva
Zeinab Salah
Zeynep Kaya
Publication venue: Elsevier Inc
Publication date: 01/12/2016
Field of study

•We report INICC device-associated module data of 50 countries from 2010-2015.•We collected prospective data from 861,284 patients in 703 ICUs for 3,506,562 days.•DA-HAI rates and bacterial resistance were higher in the INICC ICUs than in CDC-NHSN's.•Device utilization ratio in the INICC ICUs was similar to CDC-NHSN's. Background: We report the results of International Nosocomial Infection Control Consortium (INICC) surveillance study from January 2010-December 2015 in 703 intensive care units (ICUs) in Latin America, Europe, Eastern Mediterranean, Southeast Asia, and Western Pacific. Methods: During the 6-year study period, using Centers for Disease Control and Prevention National Healthcare Safety Network (CDC-NHSN) definitions for device-associated health care-associated infection (DA-HAI), we collected prospective data from 861,284 patients hospitalized in INICC hospital ICUs for an aggregate of 3,506,562 days. Results: Although device use in INICC ICUs was similar to that reported from CDC-NHSN ICUs, DA-HAI rates were higher in the INICC ICUs: in the INICC medical-surgical ICUs, the pooled rate of central line-associated bloodstream infection, 4.1 per 1,000 central line-days, was nearly 5-fold higher than the 0.8 per 1,000 central line-days reported from comparable US ICUs, the overall rate of ventilator-associated pneumonia was also higher, 13.1 versus 0.9 per 1,000 ventilator-days, as was the rate of catheter-associated urinary tract infection, 5.07 versus 1.7 per 1,000 catheter-days. From blood cultures samples, frequencies of resistance of Pseudomonas isolates to amikacin (29.87% vs 10%) and to imipenem (44.3% vs 26.1%), and of Klebsiella pneumoniae isolates to ceftazidime (73.2% vs 28.8%) and to imipenem (43.27% vs 12.8%) were also higher in the INICC ICUs compared with CDC-NHSN ICUs. Conclusions: Although DA-HAIs in INICC ICU patients continue to be higher than the rates reported in CDC-NSHN ICUs representing the developed world, we have observed a significant trend toward the reduction of DA-HAI rates in INICC ICUs as shown in each international report. It is INICC's main goal to continue facilitating education, training, and basic and cost-effective tools and resources, such as standardized forms and an online platform, to tackle this problem effectively and systematically

Crossref

University of Miami: Scholarship Miami

Elective Cancer Surgery in COVID-19–Free Surgical Pathways During the SARS-CoV-2 Pandemic: An International, Multicenter, Comparative Cohort Study

Author: Aawsaj Y
Abad Gurumeta A
Abad-Motos A
Abate E
Abatini C
Abbadessa F
Abbas AM
Abbassi-Ghadi N
Abbott D
Abbott T
Abbott Tom EF
Abd Elazeem HAS
Abdalla M
Abdallah M
Abdel Al S
Abdel Jalil R
Abdeldayem H
Abdelkader Salama I
Abdelkarem MM
Abdelkarim M
Abdelmajeed A
Abdelrahman A
Abdelrahman S
Abdelsamed A
Abdou M
Abdulkareem A
Abdulwahed E
Abdur-Rahman L
Abel MK
Abellán M
Aboelkassem Ibrahim A
Abosamak NE
Abou Chaar MK
Abou Chaar Mohammad K.
Abou-Khalil J
Abouassi A
Aboulkassem H
Abreu da Silva A
Abu Za’nouneh FJ
Abu J
Abu-Nayla I
Abubakar A
Abukhalaf Sadi
Acebes García F
Achalandabaso Boira M
Acher A
Acrich E
Adamina M
Adamina Michel
Adamoli L
Addae-Boateng E
Ademuyiwa Adesoji O
Aderombi A
Adeyeye A
Adiamah A
Adishesh M
Agapov M
Agarwal Arnav
Aggarwal A
Aghayeva A
Agilinko J
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Agostini C
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Agresta F
Aguado H
Aguilar Gonzalez M
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Ahad S
Ahmadi N
Ahmeidat A
Ahn JH
Aiken T
Aimé A
Ajlan A
Akalin M
Akaydin E
Akeel N
Akgor U
Akhtar MA
Akhter Rahman MM
Akilli H
Akin E
Akkour K
Akkulak Murat
Akmenkalne L
Al Abdallah M
Al Awwad S
Al Habes H
Al Maadany FS
Al Raddadi R
AL Sayed M
Al-Habib A
Al-Habsi R
Al-Ishaq Z
Al-Khayal K
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Lee M
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Omar Omar
on behalf of the COVIDSurg Collaborative
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Pathmanaban O
Patil S
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Xyda SE
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Yetkin G
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Yıldırım A
Yildiz A
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Yousof EA
Youssef A
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Yánez C
Yüksel E
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Zakai D
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Zakaria R
Zakaria Z
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Zambon M
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Älgå A
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Çelebi F
Çolak E
Öfner D
Öhlberger L
Öğücü H
Überrück L
Ćoza I
Šimko K
Šćepanović V
Žatecký J
Камалов А
Publication venue: American Society of Clinical Oncology
Publication date: 01/01/2021
Field of study

Keele Research Repository

Preoperative nasopharyngeal swab testing and postoperative pulmonary complications in patients undergoing elective surgery during the SARS-CoV-2 pandemic.

Author: Aawsaj Y
Abad Gurumeta A
Abad-Motos A
Abate E
Abatini C
Abbadessa F
Abbas AM
Abbassi-Ghadi N
Abbott D
Abbott T
Abbott TEF
Abd Elazeem HAS
Abdalla M
Abdallah M
Abdelaal SA
Abdeldayem H
Abdelkarem MM
Abdelkarim M
Abdelmajeed A
Abdelrahman A
Abdelrahman S
Abdelsamed A
Abdou M
Abdulkareem A
Abdulwahed E
Abdur-Rahman L
Abel MK
Abellan M
Abosamak NE
Abou Chaar MK
Abou-Khalil J
Abouassi A
Aboulkassem H
Abreu da Silva A
Abu Za'nouneh FJ
Abu J
Abu-Nayla I
Abubakar A
Abukhalaf S
Acebes Garcia F
Achalandabaso Boira M
Acher A
Acrich E
Adamina M
Adamina M
Adamoli L
Addae-Boateng E
Ademuyiwa AO
Aderombi A
Adeyeye A
Adiamah A
Adishesh M
Agapov M
Agarwal A
Aggarwal A
Aghayeva A
Agilinko J
Agnes A
Agostini C
Agoston P
Agrawal A
Agresta F
Aguado H
Aguzzoli L
Ahad S
Ahmadi N
Ahmed NR
Ahmeidat A
Ahn JH
Aiken T
Aime A
Ajlan A
Akalin M
Akaydin E
Akeel N
Akgor U
Akhtar MA
Akilli H
Akin E
Akkour K
Akkulak M
Akmenkalne L
Al Abdallah M
Al Abdel S
Al Awwad S
Al Habes H
Al Maadany FS
Al Raddadi R
AL Sayed M
Al-Habib A
Al-Habsi R
Al-Ishaq Z
Al-Khayal K
Al-Masri M
Al-Mohammad A
Al-mukhtar A
Al-Najjar H
Al-omishy H
Al-Sarireh B
Al-Tamimi Y
Alaa S
AlAamer O
Aladeojebi A
Alakaloko F
Alam F
Alam N
Alam R
Alameer E
Alamri A
Alamri A
Alanbuki A
Alatar A
Alawneh F
Alazawi D
Albertsmeier M
Albertsmeiers M
Albi Martin B
Alburakan A
Alcaide Matas F
Alconchel F
Aldayri Z
Aldecoa Ansorregui I
Alderson D
Aldokali N
Aleksic L
Alemanno G
Alexoudi V
Alfaro-Goldaracena A
Alfieri S
Alga A
Alghamdi M
Alhalal H
Alhamed A
Alharthi M
Alharthi R
Alhassan B
Alhassan N
Alhefdhi A
Ali AK
Ali M
Ali MF
Ali S
Aliyeva Z
Aljanadi F
Aljiffry M
Alkadeeki GZ
Alkarak S
Allemand C
Allison J
Almalik O
Almasri M
Almeciga A
Almeida A
Almeida AC
Almeida JI
Almgla N
Almond M
Almond M
Alnumani T
Alobeed O
Alomair A
Alonso de la Fuente N
Alonso Poza A
Alonso-Lamberti L
Alotaibi N
Alqannas M
Alresaini F
Alriyees L
Alsaif A
Alsaif F
Alsalamah R
Alsaraireh O
Alselaim N
Alser O
Alshaar M
Alshahrani M
Alshammari S
Alshareea E
Alsharif F
Alshaygy I
Alshryda S
Alsobhi S
Althobaiti W
Altintoprak F
Alurralde C
Alvarez E
Alvarez MR
Alyami M
Alzamanan M
Amaral MJ
Ameerally P
Amira G
Amonkar S
Amorim E
Ampollini L
Amrani L
Anania G
Anastasi A
Anchuelo Latorre J
Andaleeb U
Andaya V
Andrade AK
Andrade R
Andrijasevic S
Aneke IA
Ang K
Angele M
Angelo M
Angelou D
Angelou K
Annamalai S
Annessi V
Ansarin M
Anthoulakis C
Antic A
Antic S
Antonakis P
Antoniades K
Antonopoulou MI
Anula R
Anwar S
Anzak A
Aoun S
Aprile A
Aquila F
Aragon Achig EJ
Aremu I
Aremu M
Aresu G
Aribi N
Aribi S
Arican C
Arif T
Arigoni M
Arikan AE
Arkadopoulos N
Arkha Y
Armao T
Armatura G
Arminio A
Arnaud AP
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Bhatti MI
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Bin Traiki T
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Blanco-Colino R
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Buarque IL
Budacan A
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Bueno Canones AD
Buerba GA
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Cagigal Ortega EP
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Caird S
Cairncross L
Caja Vivancos P
Cakmak G
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Callanan D
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Campagnaro T
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Campbell W
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Candiani M
Candotti G
Canhoto C
Cano A
Cano-Valderrama O
Canonico G
Canotilho R
Cantalejo Diaz M
Cao H
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Capezzuoli L
Capitan-Morales L
Capizzi V
Capoglu R
Capolupo GT
Carabias A
Caram EL
Carannante F
Carcoforo P
Cardoso N
Cardoso P
Caricato M
Carrano FM
Carrasco Prats M
Carroll P
Carta AG
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Caruana EJ
Caruana EJ
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Castillejos-Molina RA
Catala Bauset JC
Catarzi L
Cato LD
Cavaleiro S
Cavalle Busquets P
Cayetano Paniagua L
Cazador Labat M
Cecchini L
Cecconello I
Cecire J
Celebi F
Celik H
Cellerino P
Cenciarelli S
Ceranic M
Ceretti PA
Cervellera M
Cervera I
Ceyhan GO
Chaar M
Chai AKW
Chakib O
Chakrabortee S
Challacombe B
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Checcucci C
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Chen L
Chen S
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Cheung LK
Chevallay M
Chew D
Chia Z
Chiappini A
Chiarella V
Chiarugi M
Chidambaram S
Chiesa-Estomba CM
Chiozza M
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Choi D
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Chong L
Choolani Bhojwani E
Choong P
Chopra S
Choudhry A
Choudhury J
Chouillard E
Chowdhry MF
Chowdhury A
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Christensen P
Christensen P
Christidis P
Christoforidis D
Christou C
Chrysos E
Chu F
Chumbinho B
Chung E
Cianflocca D
Ciccarone F
Cicerchia PM
Cimenoglu B
Cintas Catena J
Cioffi SPB
Ciofic E
Cipriani R
Cirillo B
Cirocchi N
Cisternino G
Citgez B
Citterio D
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Clatworthy S
Clifford R
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Cocozza E
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Coffey JC
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Colak E
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Colino M
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Collard B
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Collera P
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Collins C
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Colombari RC
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Colquhoun A
Combellack T
Comini LV
Conesa A
Confalonieri M
Conlon K
Connelly T
Connolly EM
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Conti L
Conti L
Contis I
Cool P
Coonar AS
Coonar AS
Cope D
Corbellini C
Corbin S
Cordera F
Cordova A
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Correia de Sa T
Correia AM
Correia J
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Corrigan M
Corte Real J
Corvera C
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Cosimelli M
Cossu ML
Costa Santos D
Costa M
Costa MJMA
Costanzi A
Costeira B
Costigan F
Cotoia A
Cotsoglou C
Cotte E
Cotter A
Cottu P
Coughlin P
Cox D
Coza I
Cozza V
Crank M
Creavin B
Cribb G
Crichton A
Cristian D
Cros B
Crugnale AS
Cuadrado-Garcia A
Cukier M
Cullinane C
Cullivan O
Cuming T
Cunha C
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Cunha MF
Cunha R
Cunningham R
Curl-Roper T
Currie A
Cvetkovic A
Cymes W
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D'Amore A
D'Andrea G
D'Angelo G
D'Ugo D
D'Ugo S
D'Urso A
Dafnios N
Daiko H
Dainius E
Dakpe S
Daliya P
Daly A
Danias N
Daniels I
Davidson B
Davidson GH
Davies A
Davies E
Davies E
Davies RJ
Dawe N
Dawson BE
Dawson C
Day A
De Andres Asenjo B
De Andres Olabarria U
De Barros J
De Berardinis R
De Bree R
De Cicco R
De Crescenzo E
De Graaff M
De Iaco P
De la Hoz Rodriguez A
De la Rosa Abaroa MA
De Lacy FB
De Miguel Ardevines MDC
De Nardi P
De Oliveira Lopez AL
De Pablo Garcia-Cuenca A
De Palma G
De Pastena M
De Simone B
De Simone V
de Solorzano Aurusa OFJ
De Sousa X
De Toma G
De Troia A
De Vincenti R
De Virgilio A
Dehal A
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Del Valle E
Delgado Fernandez J
Deligiannidis D
Delimpalta C
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Delrio P
Demetriades AK
Demir H
Demirhan R
Demyttenaere S
Denet C
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Depalma N
Derkaoui Hassani F
Derksen T
Desai A
Desai A
Desai A
Desio M
Deus AC
Devauchelle B
Devezas V
Devine M
Di Bartolomeo A
Di Bella A
Di Candido F
Di Chiara F
Di Franco G
Di Giuseppe M
Di Martino C
Di Martino M
Di Marzo F
Di Saverio S
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Di Somma A
Di Taranto G
Diamantis A
Dias B
Diaz Del Gobbo R
Diaz Pena P
Diaz Perez D
Diaz-Feijoo B
Dickson K
Dieguez B
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Diez-Valladares L
Dijan E
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Dincer HA
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Divya GS
Dixon J
Djurisic I
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Domingo S
Domingues JC
Dominguez I
Dominguez-Rosado I
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Donohue C
Dowdy S
Doyle A
Drake T
Drake TM
Drubay V
Duchalais E
Dudi-Venkata NN
Duff S
Dulgeroglu O
Dumitra S
Dumitra S
Dunderovic D
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Dunning J
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Duque-Mallen V
Duran Ballesteros M
Duran-Valles F
Durrani A
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Dwidar O
Dzamic Z
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Eastmond A
Ebbehoj AL
Economopoulou P
Edmond M
Edmondson R
Edwards J
Edwards J
Edwards JG
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Egan R
Egbeare D
Egbuchulem IK
Egoroff N
Eiriz Fernandez C
El Aamrani M
El Abbadi N
El Ahmadi B
El Bouazizi Y
El Ouahabi A
El-sayed I
Elawad A
Elayyan M
Elazzazy E
Elbe P
Eldaly A
Elena GDCR
ElFiky M
Elghazaly MS
Elhadi M
Elhamshary A
Elhoseiny M
Elhusseini M
Elkadi H
Elkaffas SMMM
Elkhayat H
Elliott JA
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Elmoslemany T
Elnemr M
Elqasabi MS
Elsey E
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Elsherbini I
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Emmanuel K
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Ensenat Nora J
Ergun S
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Escartin J
Escobar P
Escola D
ESCP ESC
Esene I
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Eskinazi D
Espin-Basany E
Espino Segura-Illa M
Espinosa CA
Espitalier F
Esposito A
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Essam E
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Estaire Gomez M
Esteban Agusti E
Esteban Sinovas O
Esteban A
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Eveno C
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Faulkner G
Faustino A
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Fazenda A
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Felli E
Fenton M
Feo CF
Feo CV
Fernandes U
Fernandes V
Fernandez Bernabe P
Fernandez Camunas A
Fernandez Pablos FJ
Fernandez Rodriguez P
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Fernandez PV
Fernandez-Lopez A
Fernando D
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Ferraz I
Ferreira Pinto AP
Ferreira C
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Ferrero A
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Figari M
Figueiredo de Barros I
Findlay L
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Fiore M
Fiore M
Fiore M
Fiori E
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Fitzgerald C
Fitzgerald JE
Fitzjohn H
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Flavin M
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Fong R
Fonseca F
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Foo CC
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Fordington S
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Fortuna L
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Frena A
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Frio F
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Fritzmann J
Frongia F
Fruscio R
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Gabre-Kidan A
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Galliamov E
Gallo G
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Galvao D
Gambacciani C
Gan C
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Garberini DMA
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Garcia Alonso M
Garcia Egea J
Garcia Escudero D
Garcia Gutierrez JJ
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Garcia Perez JM
Garcia Pineda V
Garcia Porcel VJ
Garcia Rico E
Garcia Romero E
Garcia Santos EP
Garcia Senorans PM
Garcia Septiem J
Garcia Soria V
Garcia Villayzan JE
Garcia JS
Garcia PM
Garcia-Conde M
Garcia-Loarte Gomez E
Garcia-Moreno Nisa F
Garcia-Quijada J
Garcia-Sancho Tellez L
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Gascon Ferrer I
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Gata V
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Gavalda Pellice MGP
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Gegundez Simon A
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Gerchunoff JI
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Ghallab I
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Ghannam A
Ghazali N
Ghebre R
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Giacometti M
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Gialamas E
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Ginesu GC
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Giralt Lopez de Sagredo J
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Gkekas I
Gklavas A
Gkrinia E
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Glasbey JC
Glasbey JC
Glasbey JC
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Glencer A
GlobalPaedSurg
GlobalSurg
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Gomez Sanz T
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Gomez-Rosado J
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Gonzalez Valverde FM
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Gonzalez-Nicolas Trebol MT
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Gracia I
Gracia M
Gracia-Roche C
Gradinariu G
Grama F
Granata V
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Grassi T
Grau-Talens EJ
Graystone J
Grechenig M
Grecinos G
Green L
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Gricks B
Grieco C
Griffiths B
Griffiths E
Griffiths EA
Griffiths EA
Griffiths O
Grigoroiu M
Grilo JV
Grimaldi DMS
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Grimley E
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Grubac Z
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Guariglia CA
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Guerra GR
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Ibanez-Aguirre FJ
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Publication venue: Br J Surg
Publication date: 11/11/2020
Field of study

BACKGROUND: Surgical services are preparing to scale up in areas affected by COVID-19. This study aimed to evaluate the association between preoperative SARS-CoV-2 testing and postoperative pulmonary complications in patients undergoing elective cancer surgery. METHODS: This international cohort study included adult patients undergoing elective surgery for cancer in areas affected by SARS-CoV-2 up to 19 April 2020. Patients suspected of SARS-CoV-2 infection before operation were excluded. The primary outcome measure was postoperative pulmonary complications at 30 days after surgery. Preoperative testing strategies were adjusted for confounding using mixed-effects models. RESULTS: Of 8784 patients (432 hospitals, 53 countries), 2303 patients (26.2 per cent) underwent preoperative testing: 1458 (16.6 per cent) had a swab test, 521 (5.9 per cent) CT only, and 324 (3.7 per cent) swab and CT. Pulmonary complications occurred in 3.9 per cent, whereas SARS-CoV-2 infection was confirmed in 2.6 per cent. After risk adjustment, having at least one negative preoperative nasopharyngeal swab test (adjusted odds ratio 0.68, 95 per cent confidence interval 0.68 to 0.98; P = 0.040) was associated with a lower rate of pulmonary complications. Swab testing was beneficial before major surgery and in areas with a high 14-day SARS-CoV-2 case notification rate, but not before minor surgery or in low-risk areas. To prevent one pulmonary complication, the number needed to swab test before major or minor surgery was 18 and 48 respectively in high-risk areas, and 73 and 387 in low-risk areas. CONCLUSION: Preoperative nasopharyngeal swab testing was beneficial before major surgery and in high SARS-CoV-2 risk areas. There was no proven benefit of swab testing before minor surgery in low-risk areas

Ezid

Crossref

AIR Universita degli studi di Milano

UCL Discovery

eScholarship - University of California

Archivio istituzionale della ricerca - Alma Mater Studiorum Università di Bologna

Apollo (Cambridge)

Bern Open Repository and Information System (BORIS)

Queen Mary Research Online

White Rose Research Online

Archivio istituzionale della ricerca - Università di Palermo