Magnetic performance of the main superconducting magnets for the LHC

The field strength and homogeneity of all the LHC superconducting magnets were measured as a part of the production control and qualification process that has taken place during the past four years. In addition to field measurements at room temperature performed on the integral of the production, a significant part of the magnets has been subjected to extensive magnetic measurements at cold. The measurements at cryogenic temperatures, generally performed up to excitation currents of 12 kA corresponding to the ultimate LHC energy of 7.6 TeV, were mainly based on static and dynamic field integral and harmonic measurements. This allowed us to study in detail the DC effects from persistent current magnetization and long-term decay during constant current excitation. These effects are all expected to be of relevance for the field setting and error compensation in the LHC. This paper reports the main results obtained during these tests executed at operating conditions. The integrated field quality is discussed in terms of distribution (average and spread) of the field strength and low-order harmonics as obtained for all the main ring magnet families (dipoles, main and matching quadrupoles). The dependence of field quality on coil geometry, magnet and cable manufacturer is analyzed. A projection of the field quality expected for the critical components in the machine is presented.peer-reviewe

Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization.

The QT interval, an electrocardiographic measure reflecting myocardial repolarization, is a heritable trait. QT prolongation is a risk factor for ventricular arrhythmias and sudden cardiac death (SCD) and could indicate the presence of the potentially lethal mendelian long-QT syndrome (LQTS). Using a genome-wide association and replication study in up to 100,000 individuals, we identified 35 common variant loci associated with QT interval that collectively explain ∼8-10% of QT-interval variation and highlight the importance of calcium regulation in myocardial repolarization. Rare variant analysis of 6 new QT interval-associated loci in 298 unrelated probands with LQTS identified coding variants not found in controls but of uncertain causality and therefore requiring validation. Several newly identified loci encode proteins that physically interact with other recognized repolarization proteins. Our integration of common variant association, expression and orthogonal protein-protein interaction screens provides new insights into cardiac electrophysiology and identifies new candidate genes for ventricular arrhythmias, LQTS and SCD

Polymorphisms of the XRCC1, XRCC3 and XPD genes and risk of colorectal adenoma and carcinoma, in a Norwegian cohort: a case control study

BACKGROUND: Genetic polymorphisms in DNA repair genes may influence individual variation in DNA repair capacity, which may be associated with risk of developing cancer. For colorectal cancer the importance of mutations in mismatch repair genes has been extensively documented. Less is known about other DNA repair pathways in colorectal carcinogenesis. In this study we have focused on the XRCC1, XRCC3 and XPD genes, involved in base excision repair, homologous recombinational repair and nucleotide excision repair, respectively. METHODS: We used a case-control study design (157 carcinomas, 983 adenomas and 399 controls) to test the association between five polymorphisms in these DNA repair genes (XRCC1 Arg(194)Trp, Arg(280)His, Arg(399)Gln, XRCC3 Thr(241)Met and XPD Lys(751)Gln), and risk of colorectal adenomas and carcinomas in a Norwegian cohort. Odds ratio (OR) and 95% confidence interval (95% CI) were estimated by binary logistic regression model adjusting for age, gender, cigarette smoking and alcohol consumption. RESULTS: The XRCC1 280His allele was associated with an increased risk of adenomas (OR 2.30, 95% CI 1.19–4.46). The XRCC1 399Gln allele was associated with a reduction of risk of high-risk adenomas (OR 0.62, 95% CI 0.41–0.96). Carriers of the variant XPD 751Gln allele had an increased risk of low-risk adenomas (OR 1.40, 95% CI 1.03–1.89), while no association was found with risk of carcinomas. CONCLUSION: Our results suggest an increased risk for advanced colorectal neoplasia in individuals with the XRCC1 Arg(280)His polymorphism and a reduced risk associated with the XRCC1 Arg(399)Gln polymorphism. Interestingly, individuals with the XPD Lys(751)Gln polymorphism had an increased risk of low-risk adenomas. This may suggest a role in regression of adenomas

Age at first birth in women is genetically associated with increased risk of schizophrenia

Prof. Paunio on PGC:n jäsenPrevious studies have shown an increased risk for mental health problems in children born to both younger and older parents compared to children of average-aged parents. We previously used a novel design to reveal a latent mechanism of genetic association between schizophrenia and age at first birth in women (AFB). Here, we use independent data from the UK Biobank (N = 38,892) to replicate the finding of an association between predicted genetic risk of schizophrenia and AFB in women, and to estimate the genetic correlation between schizophrenia and AFB in women stratified into younger and older groups. We find evidence for an association between predicted genetic risk of schizophrenia and AFB in women (P-value = 1.12E-05), and we show genetic heterogeneity between younger and older AFB groups (P-value = 3.45E-03). The genetic correlation between schizophrenia and AFB in the younger AFB group is -0.16 (SE = 0.04) while that between schizophrenia and AFB in the older AFB group is 0.14 (SE = 0.08). Our results suggest that early, and perhaps also late, age at first birth in women is associated with increased genetic risk for schizophrenia in the UK Biobank sample. These findings contribute new insights into factors contributing to the complex bio-social risk architecture underpinning the association between parental age and offspring mental health.Peer reviewe

Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research.Peer reviewe

Samfunnsøkonomisk analyse av et vinter-OL i Tromsø i 2018

Denne rapporten inneholder en beregning av hva det ville ha kostet, sett fra samfunnets side, å arrangere OL i Tromsø i 2018. Både de teoretiske prinsippene som er lagt til grunn og de tallmessige resultatene presenteres. Med utgangspunkt i forventet netto statlig tilskudd til markedspriser på MNOK 16246, gjøres korrigeringer knyttet til blant annet de anvendte ressursenes alternativkostnader, ekstra skatteinntekter, etterbruksverdier og næringseffekter. Resultatet er en forventet netto kostnad på MNOK 10615

The effects of wildfire on the water chemistry of dilute, acidic lakes in southern Norway

Changes in lake water chemistry were studied for >4 years following a large wildfire in a boreal forest area in Mykland, southern Norway, an area characterized by thin and patchy, base-poor and slow-weathering soils and bedrock. Accordingly, the lakes have low acid neutralizing capacity (ANC), calculated as the difference between the total concentration of base cations ([ΣBC]) and strong acid anions ([SAA]). During the initial post-fire period, and peaking about two months after the fire, the mobilization of SAA from terrestrial to aquatic systems caused a dramatic drop in ANC. In one of the lakes, ANC dropped from about 20 to −80 μeq L−1, while [H+] and inorganic aluminum ([Ali]) increased to 38 μeq L−1 (pH 4.42) and 326 μg Al L−1 (36.2 μeq L−1 as Al3+), respectively. Sulfate and chloride were the predominant anions responsible for this decline in ANC, as the nitrate increase was small. After the severe chemical episode, [SAA] in the lakes declined faster than [ΣBC], and within about one year after the wildfire, ANC was back to almost pre-fire values. However, despite the fact that [SAA] also continued to decline faster than [ΣBC] the following years, no further increase in ANC was documented. The strong ionic strength decline and the increase in TOC during the same period have likely counteracted for the potential ANC increase. There were large lake-to-lake variations in water chemistry of the wildfire affected lakes. Hydrology, geology, lake residence time and the catchment area to lake area ratio are important explanatory factors

A Statistical Analysis of Electrical Faults in the LHC Superconducting Magnets and Circuits

The large hadron collider (LHC) at CERN has been operating and generating physics experimental data since September 2008, and following its first long shut down, it has entered a second, 4-year-long physics run. It is to date the largest superconducting installation ever built, counting over 9000 magnets along its 27-km long circumference. A significant operational experience has been accumulated, including the occurrence and consequences of electrical faults at the level of the superconducting magnets, as well as their protection and instrumentation circuits. The purpose of this paper is to provide a first overview of the most common electrical faults and their frequency of occurrence in the first years of operation, and to perform a statistical analysis that can provide reference values for future productions of similar dimensions and nature