131 research outputs found

    Advanced BEM-based methodologies to identify and simulate wave fields in complex geostructures

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    To enhance the applicability of BEM for geomechanical modeling numerically optimized BEM models, hybrid FEM-BEM models, and parallel computation of seismic Full Waveform Inversion (FWI) in GPU are implemented. Inverse modeling of seismic wave propagation in inhomogeneous and heterogeneous half-plane is implemented in Boundary Element Method (BEM) using Particle Swarm Optimization (PSO). The Boundary Integral Equations (BIE) based on the fundamental solutions for homogeneous elastic isotropic continuum are modified by introducing mesh-dependent variables. The variables are optimized to obtain the site-specific impedance functions. The PSO-optimized BEM models have significantly improved the efficiency of BEM for seismic wave propagation in arbitrarily inhomogeneous and heterogeneous media. Similarly, a hybrid BEM-FEM approach is developed to evaluate the seismic response of a complex poroelastic soil region containing underground structures. The far-field semi-infinite geological region is modeled via BEM, while the near-field finite geological region is modeled via FEM. The BEM region is integrated into the global FEM system using an equivalent macro-finite-element. The model describes the entire wave path from the seismic source to the local site in a single hybrid model. Additionally, the computational efficiency of time domain FWI algorithm is enhanced by parallel computation in CPU and GPU

    Enhancement of In-Plane Seismic Full Waveform Inversion with CPU and GPU Parallelization

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    Full waveform inversion is a widely used technique to estimate the subsurface parameters with the help of seismic measurements on the surface. Due to the amount of data, model size and non-linear iterative procedures, the numerical computation of Full Waveform Inversion are computationally intensive and time-consuming. This paper addresses the parallel computation of seismic full waveform inversion with Graphical Processing Units. Seismic full-waveform inversion of in-plane wave propagation in the finite difference method is presented here. The stress velocity formulation of the wave equation in the time domain is used. A four nodded staggered grid finite-difference method is applied to solve the equation, and the perfectly matched layers are considered to satisfy Sommerfeld’s radiation condition at infinity. The gradient descent method with conjugate gradient method is used for adjoined modelling in full-waveform inversion. The host code is written in C++, and parallel computation codes are written in CUDA C. The computational time and performance gained from CUDA C and OpenMP parallel computation in different hardware are compared to the serial code. The performance improvement is enhanced with increased model dimensions and remains almost constant after a certain threshold. A GPU performance gain of up to 90 times is obtained compared to the serial code

    A transient homotypic interaction model for the influenza A virus NS1 protein effector domain

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    Influenza A virus NS1 protein is a multifunctional virulence factor consisting of an RNA binding domain (RBD), a short linker, an effector domain (ED), and a C-terminal 'tail'. Although poorly understood, NS1 multimerization may autoregulate its actions. While RBD dimerization seems functionally conserved, two possible apo ED dimers have been proposed (helix-helix and strand-strand). Here, we analyze all available RBD, ED, and full-length NS1 structures, including four novel crystal structures obtained using EDs from divergent human and avian viruses, as well as two forms of a monomeric ED mutant. The data reveal the helix-helix interface as the only strictly conserved ED homodimeric contact. Furthermore, a mutant NS1 unable to form the helix-helix dimer is compromised in its ability to bind dsRNA efficiently, implying that ED multimerization influences RBD activity. Our bioinformatical work also suggests that the helix-helix interface is variable and transient, thereby allowing two ED monomers to twist relative to one another and possibly separate. In this regard, we found a mAb that recognizes NS1 via a residue completely buried within the ED helix-helix interface, and which may help highlight potential different conformational populations of NS1 (putatively termed 'helix-closed' and 'helix-open') in virus-infected cells. 'Helix-closed' conformations appear to enhance dsRNA binding, and 'helix-open' conformations allow otherwise inaccessible interactions with host factors. Our data support a new model of NS1 regulation in which the RBD remains dimeric throughout infection, while the ED switches between several quaternary states in order to expand its functional space. Such a concept may be applicable to other small multifunctional proteins

    Mechanical, thermal and tribological properties of polyimide/nano-SiO2 composites synthesized using an in-situ polymerization

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    Polyimide (PI)/nano-SiO2 composites were successfully fabricated via a novel in-situ polymerization. Microstructure, thermal properties, mechanical performance and tribological behaviors of these composites were investigated. The results indicate that nano-SiO2 dispersed homogeneously. Compared with pure PI, thermal stability and heat resistance are higher about 10 °C with the addition of 5 wt% nano-SiO2. Compressive strength and modulus of composite with 5 wt% nano-SiO2 increase by 42.6 and 45.2%, respectively. The coefficient of friction (COF) of composite with 5 wt% nano-SiO2 decrease by 6.8% owing to the thick and uniform transfer films. Excess nano-SiO2 could adversely affect the COF of PI/nano-SiO2 composite. Additionally, wear resistance deteriorates obviously since transfer film exfoliates easily and nano-SiO2 aggregates on the surface of transfer films

    Global injury morbidity and mortality from 1990 to 2017 : results from the Global Burden of Disease Study 2017

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    Correction:Background Past research in population health trends has shown that injuries form a substantial burden of population health loss. Regular updates to injury burden assessments are critical. We report Global Burden of Disease (GBD) 2017 Study estimates on morbidity and mortality for all injuries. Methods We reviewed results for injuries from the GBD 2017 study. GBD 2017 measured injury-specific mortality and years of life lost (YLLs) using the Cause of Death Ensemble model. To measure non-fatal injuries, GBD 2017 modelled injury-specific incidence and converted this to prevalence and years lived with disability (YLDs). YLLs and YLDs were summed to calculate disability-adjusted life years (DALYs). Findings In 1990, there were 4 260 493 (4 085 700 to 4 396 138) injury deaths, which increased to 4 484 722 (4 332 010 to 4 585 554) deaths in 2017, while age-standardised mortality decreased from 1079 (1073 to 1086) to 738 (730 to 745) per 100 000. In 1990, there were 354 064 302 (95% uncertainty interval: 338 174 876 to 371 610 802) new cases of injury globally, which increased to 520 710 288 (493 430 247 to 547 988 635) new cases in 2017. During this time, age-standardised incidence decreased non-significantly from 6824 (6534 to 7147) to 6763 (6412 to 7118) per 100 000. Between 1990 and 2017, age-standardised DALYs decreased from 4947 (4655 to 5233) per 100 000 to 3267 (3058 to 3505). Interpretation Injuries are an important cause of health loss globally, though mortality has declined between 1990 and 2017. Future research in injury burden should focus on prevention in high-burden populations, improving data collection and ensuring access to medical care.Peer reviewe

    Estimating global injuries morbidity and mortality : methods and data used in the Global Burden of Disease 2017 study

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    Background While there is a long history of measuring death and disability from injuries, modern research methods must account for the wide spectrum of disability that can occur in an injury, and must provide estimates with sufficient demographic, geographical and temporal detail to be useful for policy makers. The Global Burden of Disease (GBD) 2017 study used methods to provide highly detailed estimates of global injury burden that meet these criteria. Methods In this study, we report and discuss the methods used in GBD 2017 for injury morbidity and mortality burden estimation. In summary, these methods included estimating cause-specific mortality for every cause of injury, and then estimating incidence for every cause of injury. Non-fatal disability for each cause is then calculated based on the probabilities of suffering from different types of bodily injury experienced. Results GBD 2017 produced morbidity and mortality estimates for 38 causes of injury. Estimates were produced in terms of incidence, prevalence, years lived with disability, cause-specific mortality, years of life lost and disability-adjusted life-years for a 28-year period for 22 age groups, 195 countries and both sexes. Conclusions GBD 2017 demonstrated a complex and sophisticated series of analytical steps using the largest known database of morbidity and mortality data on injuries. GBD 2017 results should be used to help inform injury prevention policy making and resource allocation. We also identify important avenues for improving injury burden estimation in the future.Peer reviewe

    Production of He-4 and (4) in Pb-Pb collisions at root(NN)-N-S=2.76 TeV at the LHC

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    Results on the production of He-4 and (4) nuclei in Pb-Pb collisions at root(NN)-N-S = 2.76 TeV in the rapidity range vertical bar y vertical bar <1, using the ALICE detector, are presented in this paper. The rapidity densities corresponding to 0-10% central events are found to be dN/dy4(He) = (0.8 +/- 0.4 (stat) +/- 0.3 (syst)) x 10(-6) and dN/dy4 = (1.1 +/- 0.4 (stat) +/- 0.2 (syst)) x 10(-6), respectively. This is in agreement with the statistical thermal model expectation assuming the same chemical freeze-out temperature (T-chem = 156 MeV) as for light hadrons. The measured ratio of (4)/He-4 is 1.4 +/- 0.8 (stat) +/- 0.5 (syst). (C) 2018 Published by Elsevier B.V.Peer reviewe

    Mapping local patterns of childhood overweight and wasting in low- and middle-income countries between 2000 and 2017

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    A double burden of malnutrition occurs when individuals, household members or communities experience both undernutrition and overweight. Here, we show geospatial estimates of overweight and wasting prevalence among children under 5 years of age in 105 low- and middle-income countries (LMICs) from 2000 to 2017 and aggregate these to policy-relevant administrative units. Wasting decreased overall across LMICs between 2000 and 2017, from 8.4% (62.3 (55.1–70.8) million) to 6.4% (58.3 (47.6–70.7) million), but is predicted to remain above the World Health Organization’s Global Nutrition Target of <5% in over half of LMICs by 2025. Prevalence of overweight increased from 5.2% (30 (22.8–38.5) million) in 2000 to 6.0% (55.5 (44.8–67.9) million) children aged under 5 years in 2017. Areas most affected by double burden of malnutrition were located in Indonesia, Thailand, southeastern China, Botswana, Cameroon and central Nigeria. Our estimates provide a new perspective to researchers, policy makers and public health agencies in their efforts to address this global childhood syndemic

    Financial Liberalisation in Nepal

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    This study examines the overall impact of financial liberalisation on Nepal�s financial system and economy. The study is specifically directed towards analysing the rationale of executing a financial liberalisation policy; preparing an account of the evolution, process and sequencing of the financial liberalisation; and evaluating the impact of the various liberalisation measures on financial and economic developments of Nepal with cointegration and causality tests. The study makes significant contributions in the area of the impact evaluation of financial liberalisation. Most of the previous studies focus on the economic growth aspect of financial liberalisation in detail, but attach less importance to the redistribution of income and stability of the financial systems. To bridge this gap, an aggregated framework for impact evaluation, which includes all of the three dimensions, is implemented in this study. The framework implemented in this study is useful not only for the impact evaluation of financial liberalisation policy, but also for other public policies. A summary index of the financial liberalisation comprising eight policy instruments is employed in this study. As some of these instruments have not been immediately fully employed, the index is designed to take into account their gradual implementation. The instruments are interest rate deregulation, removal of entry barriers, reduction in reserve requirement, easing in credit controls, implementation of prudential rules, stock market reform, privatisation of state-owned banks and external account liberalisation. A sequential procedure has been applied to test for unit roots on time series data. This procedure helps to determine the optimal test method for each time series under consideration and reduces the risk of model misspecification and biased results. The empirical test results obtained using the Nepalese quarterly data from 1970-2003 suggest that financial liberalisation in Nepal has had a mixed impact on the financial system and the national economy. The number of per capita bank branches is found to be positively associated with the widening of the financial sector, which in turn affects financial development positively. The real deposit interest rate affects the volume of time deposits (savings) positively, but the increase in gross domestic product does not affect time deposits. The volume of time deposits affects the volume of bank loans positively, but the lending rate does not have a significant impact on the volume of bank loans. Collectively, the financial liberalisation measures are positively associated with per capita income as well as with industrial development. The population density per bank branch is found to be positively associated with the volume of bank credit to the poor, while the overall measures of financial liberalisation are negatively associated with such credit. The results also suggest that financial liberalisation is positively associated with the credit-deposit ratio of the commercial banks. However, the higher credit-deposit ratio is not only associated with higher return, but also with higher risk. Therefore, it can be argued that financial liberalisation has brought instability in the Nepalese financial sector. The overall finding of this study is that financial liberalisation is positively associated with growth, but negatively associated with income equality and financial stability. However, the study does not find any causal relationship between financial development and economic growth in Nepal. Hence, the financial liberalisation in Nepal has not facilitated a financial development to the extend that contributed significantly to the economic development of the country
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