153 research outputs found

    Tribute to the Honorable James H. Coleman, Jr.

    Get PDF

    Randomized elimination and prolongation of ACE inhibitors and ARBs in coronavirus 2019 (REPLACE COVID) Trial Protocol

    Full text link
    Severe acute respiratory syndrome coronavirus 2 (SARS- CoV- 2), the virus responsible for coronavirus disease 2019 (COVID- 19), is associated with high incidence of multiorgan dysfunction and death. Angiotensin- converting enzyme 2 (ACE2), which facilitates SARS- CoV- 2 host cell entry, may be impacted by angiotensin- converting enzyme inhibitors (ACEIs) and angiotensin receptor blockers (ARBs), two commonly used antihypertensive classes. In a multicenter, international randomized controlled trial that began enrollment on March 31, 2020, participants are randomized to continuation vs withdrawal of their long- term outpatient ACEI or ARB upon hospitalization with COVID- 19. The primary outcome is a hierarchical global rank score incorporating time to death, duration of mechanical ventilation, duration of renal replacement or vasopressor therapy, and multiorgan dysfunction severity. Approval for the study has been obtained from the Institutional Review Board of each participating institution, and all participants will provide informed consent. A data safety monitoring board has been assembled to provide independent oversight of the project.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/163400/2/jch14011_am.pdfhttp://deepblue.lib.umich.edu/bitstream/2027.42/163400/1/jch14011.pd

    Evasion of anti-growth signaling: a key step in tumorigenesis and potential target for treatment and prophylaxis by natural compounds

    Get PDF
    The evasion of anti-growth signaling is an important characteristic of cancer cells. In order to continue to proliferate, cancer cells must somehow uncouple themselves from the many signals that exist to slow down cell growth. Here, we define the anti-growth signaling process, and review several important pathways involved in growth signaling: p53, phosphatase and tensin homolog (PTEN), retinoblastoma protein (Rb), Hippo, growth differentiation factor 15 (GDF15), AT-rich interactive domain 1A (ARID1A), Notch, insulin-like growth factor (IGF), and Krüppel-like factor 5 (KLF5) pathways. Aberrations in these processes in cancer cells involve mutations and thus the suppression of genes that prevent growth, as well as mutation and activation of genes involved in driving cell growth. Using these pathways as examples, we prioritize molecular targets that might be leveraged to promote anti-growth signaling in cancer cells. Interestingly, naturally-occurring phytochemicals found in human diets (either singly or as mixtures) may promote anti-growth signaling, and do so without the potentially adverse effects associated with synthetic chemicals. We review examples of naturally-occurring phytochemicals that may be applied to prevent cancer by antagonizing growth signaling, and propose one phytochemical for each pathway. These are: epigallocatechin-3-gallate (EGCG) for the Rb pathway, luteolin for p53, curcumin for PTEN, porphyrins for Hippo, genistein for GDF15, resveratrol for ARID1A, withaferin A for Notch and diguelin for the IGF1-receptor pathway. The coordination of anti-growth signaling and natural compound studies will provide insight into the future application of these compounds in the clinical setting

    Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function

    Get PDF
    The P-SlINO::SlINO-GFP transgene continues to be expressed after fertilization during the onset of fruit development. A-C: Ovules from P-SlINO::SlINO-GFP plants. D, E: Ovules from control plants. Images A (confocal) and B (DIC overlaid with GFP channel) show expression in the outer cell layer in an ovule post-anthesis. C-E are images of the surface cells of the integument of ovules taken from 3–4 mm fruits. C and D are images taken on an epifluorescence microscope (Axioplan) using a Chroma GFP filter set 41017 (Chroma, Bellows Falls, VT). E is a dark-field image of the same ovule in D. These images show expression is present in developing fruit. Scale bar in B represents 20 μm, scale bar in E represents 20 μm in C-E. (TIF 4435 kb

    Predictors of Visceral Leishmaniasis Relapse in HIV-Infected Patients: A Systematic Review

    Get PDF
    Visceral leishmaniasis (VL) is the most serious form of an insect-transmitted parasitic disease prevalent in 70 countries. The disease is caused by species of the L. donovani complex found in different geographical regions. These parasites have substantially different clinical, drug susceptibility and epidemiological characteristics. According to data from the World Health Organization, the areas where HIV-Leishmania co-infection is distributed are extensive. HIV infection increases the risk of developing VL, reduces the likelihood of a therapeutic response, and greatly increases the probability of relapse. A better understanding of the factors promoting relapses is essential; therefore we performed a systematic review of articles involving all articles assessing the predictors of VL relapse in HIV-infected individuals older than 14 years of age. Out of 178 relevant articles, 18 met the inclusion criteria and in total, data from 1017 patients were analyzed. We identified previous episodes of VL relapse, CD4+ lymphocyte count fewer than 100 cells/mL at VL diagnosis, and the absence of an increase in CD4+ counts at follow-up as major factors associated with VL relapse. Knowledge of relapse predictors can help to identify patients with different degrees of risk, facilitate and direct prophylaxis choices, and aid in patient counseling

    What Stimulates Researchers to Make Their Research Usable? Towards an Openness Approach

    Get PDF
    Ambiguity surrounding the effect of external engagement on academic research has raised questions about what motivates researchers to collaborate with third parties. We argue that what matters for society is research that can be absorbed by users. We define openness as a willingness by researchers to make research more usable by external partners by responding to external influences in their own research practices. We ask what kinds of characteristics define those researchers who are more open to creating usable knowledge. Our empirical study analyses a sample of 1583 researchers working at the Spanish Council for Scientific Research (CSIC). Results demonstrate that it is personal factors (academic identity and past experience) that determine which researchers have open behaviours. The paper concludes that policies to encourage external engagement should focus on experiences which legitimate and validate knowledge produced through user encounters, both at the academic formation career stage as well as through providing ongoing opportunities to engage with third parties.The data used for this study comes from the IMPACTO project funded by the Spanish Council for Scientific Research - CSIC (Ref. 200410E639). The work also benefited from a mobility grant awarded by Eu-Spri Forum to Julia Olmos Penuela & Paul Benneworth for her visiting research to the Center of Higher Education Policy Studies. Finally, Julia Olmos Penuela also benefited from a post-doctoral grant funded by the Generalitat Valenciana (APOSTD-2014-A-006).Olmos-Peñuela, J.; Benneworth, P.; Castro-Martínez, E. (2015). What Stimulates Researchers to Make Their Research Usable? Towards an Openness Approach. Minerva. 53(4):381-410. https://doi.org/10.1007/s11024-015-9283-4S381410534Abreu, Maria, Vadim Grinevich, Alan Hughes, and Michael Kitson. 2009. Knowledge exchange between academics and the business, public and third sectors. Cambridge: Centre for Business Research and UK-IRC.Aghion, Philippe, Mathias Dewatripont, and Jeremy C. Stein. 2008. Academic freedom, private-sector focus, and the process of innovation. RAND Journal of Economics 39: 617–635.Ajzen, Icek. 2001. Nature and operation of attitudes. Annual Review of Psychology 52(1): 27–58.Alrøe, Hugo Fjelsted, and Erik Steen Kristensen. 2002. Towards a systemic research methodology in agriculture: Rethinking the role of values in science. Agriculture and Human Values 19(1): 3–23.Audretsch, David B., Werner Bönte, and Stefan Krabel. 2010. Why do scientists in public research institutions cooperate with private firms. In DRUID Working Paper, 10–27.Baldini, Nicola, Rosa Grimaldi, and Maurizio Sobrero. 2007. To patent or not to patent? A survey of Italian inventors on motivations, incentives, and obstacles to university patenting. Scientometrics 70(2): 333–354.Bandura, Albert. 1977. Social learning theory. Englewood Cliffs, NJ: Prentice-Hall.Barnett, R. 2009. Knowing and becoming in the higher education curriculum. Studies in Higher Education 34(4): 429–440.Becher, Tony. 1994. The significance of disciplinary differences. Studies in Higher Education 19(2): 151–161.Becher, Tony, and Paul Trowler. 2001. Academic tribes and territories: Intellectual enquiry and the culture of disciplines. McGraw-Hill International.Bekkers, Rudi, and Isabel Maria Bodas Freitas. 2008. Analysing knowledge transfer channels between universities and industry: To what degree do sectors also matter? Research Policy 37(10): 1837–1853.Belderbos, René, Martin Carree, Bert Diederen, Boris Lokshin, and Reinhilde Veugelers. 2004. Heterogeneity in R&D cooperation strategies. International Journal of Industrial Organization 22(8): 1237–1263.Benner, Mats, and Ulf Sandström. 2000. Institutionalizing the triple helix: Research funding and norms in the academic system. Research Policy 29(2): 291–301.Bercovitz, Janet, and Maryann Feldman. 2008. Academic entrepreneurs: Organizational change at the individual level. Organization Science 19(1): 69–89.Berman, Elizabeth Popp. 2011. Creating the market university: How academic science became an economic engine. Princeton University Press.Bleiklie, Ivar, and Roar Høstaker. 2004. Modernizing research training-education and science policy between profession, discipline and academic institution. Higher Education Policy 17(2): 221–236.Bozeman, Barry, Daniel Fay, and Catherine P. Slade. 2013. Research collaboration in universities and academic entrepreneurship: The-state-of-the-art. The Journal of Technology Transfer 38(1): 1–67.Collini, Stefan. 2009. Impact on humanities: Researchers must take a stand now or be judged and rewarded as salesmen. The Times Literary Supplement 5563: 18–19.D’Este, Pablo, and Markus Perkmann. 2011. Why do academics engage with industry? The entrepreneurial university and individual motivations. The Journal of Technology Transfer 36(3): 316–339.D’Este, Pablo, Oscar Llopis, and Alfredo Yegros. 2013. Conducting pro-social research: Cognitive diversity, research excellence and awareness about the social impact of research: INGENIO (CSIC-UPV) Working Paper Series.Deem, Rosemary, and Lisa Lucas. 2007. Research and teaching cultures in two contrasting UK policy contexts: Academic life in education departments in five English and Scottish universities. Higher Education 54(1): 115–133.DiMaggio, Paul J., and Walter W. Powell. 1983. The iron cage revisited: Institutional isomorphism and collective rationality in organizational fields. American Sociological Review 48(2): 147–160.Downing, David B. 2005. The knowledge contract: Politics and paradigms in the academic workplace. Lincoln: Nebraska University of Nebraska Press.Donovan, Claire. 2007. The qualitative future of research evaluation. Science and Public Policy 34(8): 585–597.Durning, Bridget. 2004. Planning academics and planning practitioners: Two tribes or a community of practice? Planning Practice and Research 19(4): 435–446.Edquist, Charles. 1997. System of innovation approaches: Their emergence and characteristics. In Systems of innovation: Technologies, institutions and organizations, ed. C. Edquist, 1–35. London: Pinter.Etzkowitz, Henry, and Loet Leydesdorff. 2000. The dynamics of innovation: from National Systems and “Mode 2” to a Triple Helix of university–industry–government relations. Research Policy 29(2): 109–123.Fromhold-Eisebith, Martina, Claudia Werker, and Marcel Vojnic. 2014. Tracing the social dimension in innovation networks. In The social dynamics of innovation networks, eds. Roel Rutten, Paul Benneworth, Frans Boekema, and Dessy Irawati. London: Routledge (in press).Geuna, Aldo, and Alessandro Muscio. 2009. The governance of university knowledge transfer: A critical review of the literature. Minerva 47(1): 93–114.Gibbons, Michael, Camille Limoges, Helga Nowotny, Simon Schwartzman, Peter Scott, and Martin Trow. 1994. The new production of knowledge: The dynamics of science and research in contemporary societies. London: Sage.Gläser, Jochen. 2012. How does Governance change research content? On the possibility of a sociological middle-range theory linking science policy studies to the sociology of scientific knowledge. Technical University Berlin. Technology Studies Working Papers. http://www.ts.tu-berlin.de/fileadmin/fg226/TUTS/TUTS-WP-1-2012.pdf . Accessed 16 Feb 2015.Goethner, Maximilian, Martin Obschonka, Rainer K. Silbereisen, and Uwe Cantner. 2012. Scientists’ transition to academic entrepreneurship: Economic and psychological determinants. Journal of Economic Psychology 33(3): 628–641.Gulbrandsen, Magnus, and Jens-Christian Smeby. 2005. Industry funding and university professors’ research performance. Research Policy 34(6): 932–950.Haeussler, Carolin, and Jeannette Colyvas. 2011. Breaking the ivory tower: Academic entrepreneurship in the life sciences in UK and Germany. Research Policy 40(1): 41–54.Hessels, Laurens K., Harro van Lente, John Grin, and Ruud E.H.M. Smits. 2011. Changing struggles for relevance in eight fields of natural science. Industry and Higher Education 25(5): 347–357.Hessels, Laurens K., and Harro Van Lente. 2008. Re-thinking new knowledge production: A literature review and a research agenda. Research Policy 37(4): 740–760.Hoye, Kate, and Fred Pries. 2009. ‘Repeat commercializers’, the ‘habitual entrepreneurs’ of university–industry technology transfer. Technovation 29(10): 682–689.Jacobson, Nora, Dale Butterill, and Paula Goering. 2004. Organizational factors that influence university-based researchers’ engagement in knowledge transfer activities. Science Communication 25(3): 246–259.Jain, Sanjay, Gerard George, and Mark Maltarich. 2009. Academics or entrepreneurs? Investigating role identity modification of university scientists involved in commercialization activity. Research Policy 38(6): 922–935.Jasanoff, Sheila, and Sang-Hyun Kim. 2013. Sociotechnical imaginaries and national energy policies. Science as Culture 22(2): 189–196.Jensen, Pablo. 2011. A statistical picture of popularization activities and their evolutions in France. Public Understanding of Science 20(1): 26–36.Kitcher, Philip. 2001. Science, truth, and democracy. Oxford: Oxford University Press.Knorr-Cetina, Karin. 1981. The manufacture of knowledge: An essay on the constructivist and contextual nature of science. Oxford: Pergamon Press.Kronenberg, Kristin, and Marjolein Caniëls. 2014. Professional proximity in research collaborations. In The social dynamics of innovation networks, eds. Roel Rutten, Paul Benneworth, Frans Boekema, and Dessy Irawati. London: Routledge (in press).Krueger, Rob, and David Gibbs. 2010. Competitive global city regions and sustainable development’: An interpretive institutionalist account in the South East of England. Environment and planning A 42: 821–837.Lam, Alice. 2011. What motivates academic scientists to engage in research commercialization: ‘Gold’, ‘ribbon’ or ‘puzzle’? Research Policy 40(10): 1354–1368.Landry, Réjean, Malek Saïhi, Nabil Amara, and Mathieu Ouimet. 2010. Evidence on how academics manage their portfolio of knowledge transfer activities. Research Policy 39(10): 1387–1403.Lee, Alison, and David Boud. 2003. Writing groups, change and academic identity: Research development as local practice. Studies in Higher Education 28(2): 187–200.Lee, Yong S. 1996. ‘Technology transfer’ and the research university: A search for the boundaries of university–industry collaboration. Research Policy 25(6): 843–863.Lee, Yong S. 2000. The sustainability of university–industry research collaboration: An empirical assessment. The Journal of Technology Transfer 25(2): 111–133.Leisyte, Liudvika, Jürgen Enders, and Harry De Boer. 2008. The freedom to set research agendas—illusion and reality of the research units in the Dutch Universities. Higher Education Policy 21(3): 377–391.Louis, Karen Seashore, David Blumenthal, Michael E. Gluck, and Michael A. Stoto. 1989. Entrepreneurs in academe: An exploration of behaviors among life scientists. Administrative Science Quarterly 34(1): 110–131.Lowe, Philip, Jeremy Phillipson, and Katy Wilkinson. 2013. Why social scientists should engage with natural scientists. Contemporary Social Science 8(3): 207–222.Martín-Sempere, María José, Belén Garzón-García, and Jesús Rey-Rocha. 2008. Scientists’ motivation to communicate science and technology to the public: Surveying participants at the Madrid Science Fair. Public Understanding of Science 17(3): 349–367.Martin, Ben. 2003. The changing social contract for science and the evolution of the university. In Science and innovation: Rethinking the rationales for funding and governance, eds. A. Geuna, A.J. Salter, and W.E. Steinmueller, 7–29. Cheltenhan: Edward Elgar.Merton, Robert K. 1973. The sociology of science: Theoretical and empirical investigations. Chicago: University of Chicago Press.Miller, Thaddeus R., and Mark W. Neff. 2013. De-facto science policy in the making: how scientists shape science policy and why it matters (or, why STS and STP scholars should socialize). Minerva 51(3): 295–315.Muthén, Bengt O. 1998–2004. Mplus Technical Appendices. Muthén & Muthén. Los Angeles, CA.: Muthén & Muthén.Nedeva, Maria. 2013. Between the global and the national: Organising European science. Research Policy 42(1): 220–230.Neff, Mark William. 2014. Research prioritization and the potential pitfall of path dependencies in coral reef science. Minerva 52(2): 213–235.Nelson, Richard R. 2001. Observations on the post-Bayh-Dole rise of patenting at American universities. The Journal of Technology Transfer 26(1): 13–19.Nowotny, Helga, Peter Scott, and Michael Gibbons. 2001. Re-thinking science: Knowledge and the public in an age of uncertainty. Cambridge: Polity Press.Olmos-Peñuela, Julia, Paul Benneworth, and Elena Castro-Martínez. 2014a. Are ‘STEM from Mars and SSH from Venus’? Challenging disciplinary stereotypes of research’s social value. Science and Public Policy 41: 384–400.Olmos-Peñuela, Julia, Elena Castro-Martínez, and Manuel Fernández-Esquinas. 2014b. Diferencias entre áreas científicas en las prácticas de divulgación de la investigación: un estudio empírico en el CSIC. Revista Española de Documentación Científica. doi: 10.3989/redc.2014.2.1096 .Ouimet, Mathieu, Nabil Amara, Réjean Landry, and John Lavis. 2007. Direct interactions medical school faculty members have with professionals and managers working in public and private sector organizations: A cross-sectional study. Scientometrics 72(2): 307–323.Perkmann, Markus, Valentina Tartari, Maureen McKelvey, Erkko Autio, Anders Brostrom, Pablo D’Este, Riccardo Fini, et al. 2013. Academic engagement and commercialisation: A review of the literature on university-industry relations. Research Policy 42(2): 423–442.Philpott, Kevin, Lawrence Dooley, Caroline O’Reilly, and Gary Lupton. 2011. The entrepreneurial university: Examining the underlying academic tensions. Technovation 31(4): 161–170.Rutten, Roel, and Frans Boekema. 2012. From learning region to learning in a socio-spatial context. Regional Studies 46(8): 981–992.Sarewitz, Daniel, and Roger A. Pielke. 2007. The neglected heart of science policy: reconciling supply of and demand for science. Environmental Science & Policy 10(1): 5–16.Sauermann, Henry, and Paula Stephan. 2013. Conflicting logics? A multidimensional view of industrial and academic science. Organization Science 24(3): 889–909.Schein, Edgar H. 1985. Organizational culture and leadership: A dynamic view. San Francisco, CA: Jossey-Bass.Shane, Scott. 2000. Prior knowledge and the discovery of entrepreneurial opportunities. Organization Science 11(4): 448–469.Spaapen, Jack, and Leonie van Drooge. 2011. Introducing ‘productive interactions’ in social impact assessment. Research Evaluation 20(3): 211–218.Stokes, Donald E. 1997. Pasteur’s quadrant: Basic science and technological innovation. Washington, DC: Brookings Institution Press.Tartari, Valentina, and Stefano Breschi. 2012. Set them free: scientists’ evaluations of the benefits and costs of university–industry research collaboration. Industrial and Corporate Change 21(5): 1117–1147.Tinker, Tony, and Rob Gray. 2003. Beyond a critique of pure reason: From policy to politics to praxis in environmental and social research. Accounting, Auditing & Accountability Journal 16(5): 727–761.van Rijnsoever, Frank J., Laurens K. Hessels, and Rens L.J. Vandeberg. 2008. A resource-based view on the interactions of university researchers. Research Policy 37(8): 1255–1266.Venkataraman, Sankaran. 1997. The distinctive domain of entrepreneurship research: An editor’s perspective. Advances in Entrepreneurship, Firm Emergence, and Growth 3: 119–138.Verspagen, Bart. 2006. University research, intellectual property rights and European innovation systems. Journal of Economic Surveys 20(4): 607–632.Villanueva-Felez, Africa, Jordi Molas-Gallart, and Alejandro Escribá-Esteve. 2013. Measuring personal networks and their relationship with scientific production. Minerva 51(4): 465–483.Watermeyer, Richard. 2015. Lost in the ‘third space’: the impact of public engagement in higher education on academic identity, research practice and career progression. European Journal of Higher Education (online first, doi: 10.1080/21568235.2015.1044546 ).Weingart, Peter. 2009. Editorial for Issue 47/3. Minerva 47(3): 237–239.Ziman, John. 1996. ‘Postacademic science’: Constructing knowledge with networks and norms. Science Studies 1: 67–80.Zomer, Arend H., Ben W.A. Jongbloed, and Jürgen Enders. 2010. Do spin-offs make the academics’ heads spin? The impacts of spin-off companies on their parent research organisation. Minerva 48(3): 331–353

    The Physics of the B Factories

    Get PDF
    This work is on the Physics of the B Factories. Part A of this book contains a brief description of the SLAC and KEK B Factories as well as their detectors, BaBar and Belle, and data taking related issues. Part B discusses tools and methods used by the experiments in order to obtain results. The results themselves can be found in Part C

    CMS physics technical design report : Addendum on high density QCD with heavy ions

    Get PDF
    Peer reviewe

    Federated learning enables big data for rare cancer boundary detection.

    Get PDF
    Although machine learning (ML) has shown promise across disciplines, out-of-sample generalizability is concerning. This is currently addressed by sharing multi-site data, but such centralization is challenging/infeasible to scale due to various limitations. Federated ML (FL) provides an alternative paradigm for accurate and generalizable ML, by only sharing numerical model updates. Here we present the largest FL study to-date, involving data from 71 sites across 6 continents, to generate an automatic tumor boundary detector for the rare disease of glioblastoma, reporting the largest such dataset in the literature (n = 6, 314). We demonstrate a 33% delineation improvement for the surgically targetable tumor, and 23% for the complete tumor extent, over a publicly trained model. We anticipate our study to: 1) enable more healthcare studies informed by large diverse data, ensuring meaningful results for rare diseases and underrepresented populations, 2) facilitate further analyses for glioblastoma by releasing our consensus model, and 3) demonstrate the FL effectiveness at such scale and task-complexity as a paradigm shift for multi-site collaborations, alleviating the need for data-sharing

    Author Correction: Federated learning enables big data for rare cancer boundary detection.

    Get PDF
    10.1038/s41467-023-36188-7NATURE COMMUNICATIONS14
    corecore