19 research outputs found
Bayesian latent class estimation of sensitivity and specificity parameters of diagnostic tests for bovine tuberculosis in chronically infected herds in Northern Ireland
Publication history: Accepted - 26 April 2018; Published online - 1 May 2018.In the European Union, the recommended ante-mortem diagnostic methods for bovine tuberculosis (bTB)
include the single intradermal cervical comparative tuberculin (SICCT) test and the interferon-gamma (IFN-
g) test as an ancillary test. The SICCT test has a moderate sensitivity (Se) and high specificity (Sp), while the
IFN-g test has good Se, but a lower Sp than the SICCT test. A retrospective Bayesian latent class analysis was
conducted on 71,185 cattle from 806 herds chronically infected with bTB distributed across Northern Ireland
(NI) to estimate the Se and Sp of the common ante-mortem tests and meat inspection. Analyses were also
performed on data stratified by farming type and herd location to explore possible differences in test
performance given the heterogeneity in the population. The mean estimates in chronically infected herds
were: (1) ‘standard’ SICCT: Se 40.5–57.7%, Sp 96.3–99.7%; (2) ‘severe’ SICCT: Se 49.0%–60.6%, Sp 94.4–99.4%;
(3) IFN-g(bovine–avian) using a NI optical density (OD) cut-off difference of 0.05: IFN-g(B–A)NI: Se 85.8–
93.0%, Sp 75.6–96.2%; (4) IFN-g(bovine–avian) using a standard ‘commercial’ OD cut-off difference of 0.1:
IFN-g(B–A)0.1: Se 83.1–92.1%, Sp 83.1–97.3%; and (5) meat inspection: Se 49.0–57.1% Se, Sp 99.1–100%. Se
estimates were lower in cattle from dairy farms than from beef farms. There were no notable differences in
estimates by location of herds. Certain population characteristics, such as production type, might influence
the ability of bTB tests to disclose truly infected cases.This study is part of a larger project on the evaluation of the
performance characteristics of the test in chronic bTB herds in NI
from 2004 to 2010. It was
financed by DAERA (E&I grant code 11/
03/10)
Northern Ireland farm-level management factors for prolonged bovine tuberculosis herd breakdowns.
Publication history: Accepted - 16 September 2020; Published online - 28 September 2020This study determined farm management factors associated with long-duration bovine tuberculosis (bTB) breakdowns disclosed in the period 23 May 2016 to 21 May 2018; a study area not previously subject to investigation in Northern Ireland. A farm-level epidemiological investigation (n = 2935) was completed when one or more Single Intradermal Comparative Cervical Test (SICCT) reactors or when one or more confirmed (positive histological and/or bacteriological result) lesion at routine slaughter were disclosed. A case-control study design was used to construct an explanatory set of management factors associated with long-duration bTB herd breakdowns; with a case (n = 191) defined as an investigation into a breakdown of 365 days or longer. Purchase of infected animal(s) had the strongest association as the most likely source of infection for long-duration bTB herd breakdowns followed by badgers and then cattle-to-cattle contiguous herd spread. However, 73.5% (95% CI 61.1–85.9%) of the herd type contributing to the purchase of infection source were defined as beef fattening herds. This result demonstrates two subpopulations of prolonged bTB breakdowns, the first being beef fattening herds with main source continuous purchase of infected animals and a second group of primary production herds (dairy, beef cows and mixed) with risk from multiple sources
Effect of selective removal of badgers (Meles meles) on ranging behaviour during a ‘Test and Vaccinate or Remove’ intervention in Northern Ireland
Publication history: Accepted - 23 April 2021; Published online - 7 May 2021The role of the Eurasian badger (Meles meles) as a wildlife host has complicated the management of bovine tuberculosis (bTB) in cattle. Badger ranging behaviour has previously been found to be altered by culling of badgers and has been suggested to increase the transmission
of bTB either among badgers or between badgers and cattle. In 2014, a five-year bTB intervention research project in a 100 km2 area in Northern Ireland was initiated involving selective removal of dual path platform (DPP) VetTB (immunoassay) test positive badgers and vaccination followed by release of DPP test negative badgers (‘Test and Vaccinate or
Remove’). Home range sizes, based on position data obtained from global positioning system collared badgers, were compared between the first year of the project, where no DPP test positive badgers were removed, and follow-up years 2–4 when DPP test positive badgers were
removed. A total of 105 individual badgers were followed over 21 200 collar tracking nights. Using multivariable analyses, neither annual nor monthly home ranges differed significantly in size between years, suggesting they were not significantly altered by the bTB intervention
that was applied in the study area.This research was funded by the Department of Agriculture, Environment and Rural Affairs for Northern Ireland
Monitoring Mycobacterium bovis in Eurasian badgers ( Meles meles ) killed by vehicles in Northern Ireland between 1998 and 2011
Despite extensive long-term eradication programmes, bovine tuberculosis (bTB) remains endemic in much of the British Isles. The cost of the national eradication programme in Northern Ireland was estimated at £23 million in 2010/2011.1 There is evidence that badgers play a role in the maintenance and spread of Mycobacterium bovis to cattle (as reviewed by Allen and others2). Northern Ireland is a small country (13,843 km2) with an agricultural land that is dominated by grass production, which supports 1.6 million cattle among 20,000 farms.3 The estimated badger population of 34,100 (95 per cent confidence interval (CI) 26,200 to 42,000) is widespread and contained within 7600 social groups (95 per cent CI 6200 to 9000).4 A road traffic accident (RTA) survey began in 1998 in Northern Ireland with the aim of describing the occurrence of M bovis within the badger population
Measurement of the Bottom-Strange Meson Mixing Phase in the Full CDF Data Set
We report a measurement of the bottom-strange meson mixing phase \beta_s
using the time evolution of B0_s -> J/\psi (->\mu+\mu-) \phi (-> K+ K-) decays
in which the quark-flavor content of the bottom-strange meson is identified at
production. This measurement uses the full data set of proton-antiproton
collisions at sqrt(s)= 1.96 TeV collected by the Collider Detector experiment
at the Fermilab Tevatron, corresponding to 9.6 fb-1 of integrated luminosity.
We report confidence regions in the two-dimensional space of \beta_s and the
B0_s decay-width difference \Delta\Gamma_s, and measure \beta_s in [-\pi/2,
-1.51] U [-0.06, 0.30] U [1.26, \pi/2] at the 68% confidence level, in
agreement with the standard model expectation. Assuming the standard model
value of \beta_s, we also determine \Delta\Gamma_s = 0.068 +- 0.026 (stat) +-
0.009 (syst) ps-1 and the mean B0_s lifetime, \tau_s = 1.528 +- 0.019 (stat) +-
0.009 (syst) ps, which are consistent and competitive with determinations by
other experiments.Comment: 8 pages, 2 figures, Phys. Rev. Lett 109, 171802 (2012
Doenças de bovinos no Sul do Brasil: 6.706 casos
As doenças que acometem bovinos na região Sul do Brasil foram analisadas através de um estudo dos protocolos de necropsia de 6.706 bovinos examinados pelo Laboratório de Patologia Veterinária da Universidade Federal de Santa (LPV-UFSM), Rio Grande do Sul, de 1964-2008. Desses, 20,9% foram necropsias realizadas no LPV-UFSM e 79,1% foram amostras de tecidos submetidos por veterinários de campo. Dos 6.706 exames, 62,9% tinham diagnóstico conclusivo. A autólise ou material insuficiente foram as principais razões para a ocorrência de casos com diagnóstico inconclusivo. A intoxicação por Senecio spp. foi a principal causa de morte de bovinos neste estudo. As plantas tóxicas e as toxiinfecções juntas, responderam por 22,8% dos casos com diagnóstico conclusivo. As doenças inflamatórias e as parasitoses juntas contribuíram com mais de 30% das doenças de bovinos e a tristeza parasitária bovina foi a principal doença nessa categoria. As demais categorias distribuíram-se na seguinte ordem: neoplasmas e lesões tumoriformes (13,87%), doenças causadas por agentes físicos (2,7%), doenças metabólicas e nutricionais (2,46%), distúrbios circulatórios (1,4%), doenças degenerativas (1,1%), distúrbios do desenvolvimento (0,54%), distúrbios iatrogênicos (0,16%), distúrbios imunogênicos (0,19%) e, outros distúrbios (0,21%). A alta prevalência de tumores em bovinos foi atribuída a ingestão crônica de Pteridium aquilinum, uma toxicose comum na região. As principais doenças de bovinos na região estudada estão relacionadas a fatores ambientais resultante do manejo característico de criação predominantemente extensiva adotado na região.The diseases affecting cattle in southern Brazil were studied through a review of the necropsy reports filed at the Laboratório de Patologia Veterinária of the Universidade Federal de Santa Maria (LPV-UFSM), Rio Grande do Sul, and pertaining to the examination of 6.076 cattle during 1964-2008. Of those exams 29.9% were necropsies performed at the LPV-UFSM and 79.1% were mailed-in organ fragments from necropsies performed at the field by veterinary practitioners. Autolysis and non-representative sampling o mailed in organs were the main reasons for non-conclusive diagnosis. Poisoning by Senecio spp. was the main cause of death in cattle in this study and poisonous plants together with toxi-infections accounted for 22.8% of the cases with conclusive diagnosis. Inflammatory diseases together with parasitic diseases accounted for more than 30% of cattle diseases and babesiosis and anaplasmosis were the main diseases in this category. Other categories were distributed in the following order: neoplasms and tumor-like lesions (13.87%), diseases caused by physical agents (2.7%), metabolic and nutritional diseases (2.46%), circulatory disturbances (1.4%), degenerative diseases (1.1%), developmental disorders (0.54%), iatrogenic diseases and sundry lesions. The high prevalence of tumors in cattle in this study was attributed to the chronic ingestion of Pteridium aquilinum, a common toxicosis in the region. The main diseases in cattle from the studied region are related to environmental factors associated to the predominantly husbandry practices adopted in the region
Epidemiological studies on economically important diseases of cattle in Northern Ireland
SIGLEAvailable from British Library Document Supply Centre-DSC:DXN030971 / BLDSC - British Library Document Supply CentreGBUnited Kingdo
Comparing production-biomass ratios of benthos and suprabenthos in macrofaunal marine crustaceans
Using available data from the literature, we compared the productionbiomass ratios (P/B) between the suprabenthic (= hyperbenthic) and the benthic (infaunaepifauna) species within the group of the macrofaunal marine crustaceans. This data set consists of 91 P/B estimates (26 for suprabenthos and 65 for infaunaepifauna) for 49 different species. Suprabenthic crustacean P/B was significantly higher than P/B of benthic crustacean (post-hoc Scheffé test; one-way analysis of covariance, ANCOVA; p < 103) and also of other (noncrustacean) benthic invertebrate (p < 104). Predictive multilinear regression (MLR) analysis for macrofaunal marine crustaceans showed P/B to depend significantly on mean annual temperature (T) and mean individual weight (W) (R2 = 0.367). Adding the variable swimming capacity increased goodness-of-fit to R2 = 0.528. The higher P/B of suprabenthic (= swimming) macrofauna in comparison with that of the benthic compartment seems to be related to the most apparent feature of the suprabenthos, its swimming capacity. The high P/Bs reported for suprabenthic species indicate how a nontrivial part of benthic production can be ignored if suprabenthos is not well sampled, therefore biasing the models of energy flow generated for trophic webs