Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research.Peer reviewe

Deign and build step-down switching regulator

This report explains the basic concepts of regulators and switching mode power supplies. The basic operating principles of both linear and switching regulators are explained. Also, the advantages and disadvantages of each solution are discussed. The step-down switching regulator is used to further explain the design considerations of a switching regulator. A step-down switching regulator was designed and constructed in this hardware project. After the theoretical basis and practical analysis, the input voltage was stepped down using a MC34063A IC chip. A switching regulator was built using IC chip and discrete component to bring down a 12V to 5V power supply.Bachelor of Engineerin

The Role of OTS Density on Pentacene and C-60 Nucleation, Thin Film Growth, and Transistor Performance

In organic thin film transistors (OTFTs), charge transport occurs in the first few monolayers of the semiconductor near the semiconductor/dielectric interface. Previous work has investigated the roles of dielectric surface energy, roughness, and chemical functionality on performance. However, large discrepancies in performance, even with apparently identical surface treatments, indicate that additional surface parameters must be identified and controlled in order to optimize OTETs. Here, a crystalline, dense octadecylsilane (OTS) surface modification layer is found that promotes two-dimensional semiconductor growth. Higher mobility is consistently achieved for films deposited on crystalline OTS compared to on disordered OTS, with mobilities as high as 5.3 and 2.3 cm(2)V(-1) s(-1) for C-60 and pentacene, respectively. This is a significant step toward morphological control of organic semiconductors which is directly linked to their thin film carrier transport.X11170174sciescopu

Surface-Tethered Iterative Carbohydrate Synthesis: A Spacer Study

Comparative study of Surface-Tethered Iterative Carbohydrate Synthesis (STICS) using HPLC-assisted experimental setup clearly demonstrates benefits of using longer spacer-anchoring systems. The use of mixed self-assembled monolayers helps provide the required space for glycosylation reaction around the immobilized glycosyl acceptor. Both extension of the spacer length and using mixed self-assembled monolayers help promote the reaction, and the beneficial effects may include moving the glycosyl acceptor further out into solution and providing additional conformational flexibility. It is possible that surface-immobilized glycosyl acceptors with a longer spacer (C8–O–C8)-lipoic acid have a higher tendency to mimic a solution-phase reaction environment than acceptors with shorter spacers