590 research outputs found
Self-recognition in corals facilitates deep-sea habitat engineering
- Author
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/2014
- Field of study
The ability of coral reefs to engineer complex three-dimensional habitats is central to their success and the rich biodiversity they support. In tropical reefs, encrusting coralline algae bind together substrates and dead coral framework to make continuous reef structures, but beyond the photic zone, the cold-water coral Lophelia pertusa also forms large biogenic reefs, facilitated by skeletal fusion. Skeletal fusion in tropical corals can occur in closely related or juvenile individuals as a result of non-aggressive skeletal overgrowth or allogeneic tissue fusion, but contact reactions in many species result in mortality if there is no ‘self-recognition’ on a broad species level. This study reveals areas of ‘flawless’ skeletal fusion in Lophelia pertusa, potentially facilitated by allogeneic tissue fusion, are identified as having small aragonitic crystals or low levels of crystal organisation, and strong molecular bonding. Regardless of the mechanism, the recognition of ‘self’ between adjacent L. pertusa colonies leads to no observable mortality, facilitates ecosystem engineering and reduces aggression-related energetic expenditure in an environment where energy conservation is crucial. The potential for self-recognition at a species level, and subsequent skeletal fusion in framework-forming cold-water corals is an important first step in understanding their significance as ecological engineers in deep-seas worldwide
TRY plant trait database - enhanced coverage and open access
- Author
- Aakala T
- Abedi M
- Acosta ATR
- Adamidis GC
- Adamson K
- Aiba M
- Albert CH
- Alcantara JM
- Alcazar CC
- Aleixo I
- Ali H
- Amiaud B
- Ammer C
- Amoroso MM
- Anand M
- Anderson C
- Anh TDL
- Anten N
- Antos J
- Apgaua DMG
- Ashman TL
- Asmara DH
- Asner GP
- Aspinwall M
- Atkin O
- Aubin I
- Baastrup-Spohr L
- Bahalkeh K
- Bahn M
- Baker T
- Baker WJ
- Bakker JP
- Baldocchi D
- Baltzer J
- Banerjee A
- Baranger A
- Barlow J
- Barneche DR
- Baruch Z
- Bastianelli D
- Battles J
- Bauerle W
- Bauters M
- Bazzato E
- Beckmann M
- Beeckman H
- Beierkuhnlein C
- Bekker R
- Belfry G
- Belluau M
- Beloiu M
- Benavides R
- Benomar L
- Berdugo-Lattke ML
- Berenguer E
- Bergamin R
- Bergmann J
- Berner L
- Bernhardt-Romermann M
- Bigler C
- Bjorkman AD
- Blackman C
- Blanco C
- Blonder B
- Blumenthal D
- Bocanegra-Gonzalez KT
- Boeckx P
- Bohlman S
- Bohning-Gaese K
- Boisvert-Marsh L
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- Bonisch G
- Boom A
- Boonman CCF
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- Boughton EH
- Boukili V
- Bowman DMJS
- Bravo S
- Brendel MR
- Broadley MR
- Brown KA
- Bruelheide H
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- Bunker DE
- Burger J
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- Camac J
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- Cavender-Bares J
- Cerabolini BEL
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- Chacon-Madrigal E
- Chapin FS
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- Cherubini P
- Chianucci F
- Choat B
- Chung KS
- Chytry M
- Ciccarelli D
- Coll L
- Collins CG
- Conti L
- Coomes D
- Cornelissen JHC
- Cornwell WK
- Corona P
- Coyea M
- Craine J
- Craven D
- Cromsigt JPGM
- Csecserits A
- Cufar K
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- da Silva AC
- Dahlin KM
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- de Dios VR
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- Johansen JL
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- Joly CA
- Jordan GJ
- Joseph GS
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- le Roux PC
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- Lhotsky B
- Li XE
- Li YZ
- Lichstein JW
- Liebergesell M
- Lim JY
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- Lukacs BA
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- Malhado ACM
- Mallik A
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- Marchetti Z
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- McFadden IR
- McGill BJ
- McPartland MY
- Medeiros JS
- Medlyn B
- Meerts P
- Mehrabi Z
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- Melo FPL
- Mencuccini M
- Meredieu C
- Messier J
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- Myers-Smith IH
- Myster RW
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- Narayanan A
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- Neuschulz EL
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- Novakovskiy A
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- Papageorgiou AC
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- Tothmeresz B
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- Trolliet F
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- Tsakalos JL
- Tsiripidis I
- Tysklind N
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- van Bodegom PM
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- Weedon JT
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- Westwood A
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- Zo-Bi IC
- Zotz G
- Publication venue
- 'Royal College of Obstetricians & Gynaecologists (RCOG)'
- Publication date
- 01/01/2020
- Field of study
Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives
Measurements of the properties of Lambda_c(2595), Lambda_c(2625), Sigma_c(2455), and Sigma_c(2520) baryons
- Author
- Aaltonen T
- Abdullin S
- Acosta D
- Acosta JG
- Adam N
- Adams MR
- Adams T
- Agostino L
- Akgun B
- Akgun U
- Alagoz E
- Albayrak EA
- Albrow M
- Alexander J
- Almenar CC
- Alver B
- Alverson G
- Amerio S
- Amidei D
- Anastassov A
- Anastassov A
- Anderson J
- Anghel IM
- Annovi A
- Antonelli L
- Antos J
- Apanasevich L
- Apollinari G
- Apollinari G
- Appel JA
- Apresyan A
- Arisawa T
- Artikov A
- Asaadi J
- Ashmanskas W
- Askew A
- Atac M
- Auerbach B
- Aurisano A
- Avery P
- Azfar F
- Baarmand MM
- Baden A
- Badgett W
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- Bakken JA
- Bandurin D
- Banerjee S
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- Barnes VE
- Barnes VE
- Barnett BA
- Barnett BA
- Barria P
- Bartos P
- Bauce M
- Bauer G
- Bauer G
- Bauerdick LAT
- Baumgartel D
- Baur U
- Bazterra VE
- Bean A
- Bedeschi F
- Beecher D
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- Bellettini G
- Bellinger J
- Bendavid J
- Benelli G
- Benjamin D
- Beretvas A
- Beretvas A
- Berry D
- Berry E
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- Betchart B
- Betts RR
- Bhat PC
- Bhatti A
- Bilki B
- Binkley M
- Biselli A
- Bisello D
- Bizjak I
- Bland KR
- Blekman F
- Bloch I
- Bloom K
- Blumenfeld B
- Blumenfeld B
- Bocci A
- Bochenek J
- Bodek A
- Bodek A
- Boeriu O
- Bolla G
- Bolton T
- Bonato A
- Borcherding F
- Borrello L
- Bortoletto D
- Bortoletto D
- Bose S
- Boudreau J
- Boulahouache C
- Bourilkov D
- Boutemeur M
- Boveia A
- Brau B
- Brigliadori L
- Brisuda A
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- Brucken E
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- Budagov J
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- Campanelli M
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- Carlsmith D
- Carosi R
- Carrillo S
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- Casarsa M
- Castro A
- Catastini P
- Cauz D
- Cavaliere V
- Cavalli-Sforza M
- Cavanaugh R
- Ceballos GG
- Ceron C
- Cerri A
- Cerrito L
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- Chasco M
- Chatterjee A
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- Chen M
- Chen YC
- Chertok M
- Chetluru V
- Cheung HWK
- Chiarelli G
- Chlachidze G
- Chlebana F
- Chlebana F
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- Chokheli D
- Chou JP
- Chung WH
- Chung YS
- Chung YS
- Cihangir S
- Ciobanu CI
- Ciocci MA
- Cirino G
- Claes DR
- Clarida W
- Clark A
- Clarke C
- Cole P
- Compostella G
- Convery ME
- Conway J
- Cooper SI
- Corbo M
- Cordelli M
- Cox CA
- Cox DJ
- Cremaldi LM
- Crescioli F
- Cuevas J
- Culbertson R
- Cumalat JP
- Cuplov V
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- d'Errico M
- D'Onofrio M
- da Costa JG
- Dagenhart D
- Dahmes B
- Das S
- Datta M
- de Barbaro P
- de Barbaro P
- De Benedetti A
- De Cecco S
- De Lorenzo G
- Dell'Orso M
- Deluca C
- Demarteau M
- Demina R
- Demortier L
- Deng J
- Deninno M
- Devoto F
- Di Canto A
- Di Giovanni GP
- Di Ruzza B
- Diamond B
- Dinardo ME
- Dittmann JR
- Dobur D
- Dominguez A
- Donati S
- Dong P
- Dorigo M
- Dorigo T
- Dorney B
- Dragoiu C
- Drell BR
- Drozdetskiy A
- Dudero PR
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- Duru F
- Dutta V
- Eads M
- Eartly DP
- Ebina K
- Ecklund KM
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- Erbacher R
- Errede D
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- Eshaq Y
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- Everett A
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- Fehling D
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- Ferencek D
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- Funakoshi Y
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- Garcia-Bellido A
- Garcia-Solis EJ
- Garfinkel AF
- Garfinkel AF
- Garosi P
- Gartner J
- Gaultney V
- Gecse Z
- Gerbaudo D
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- Gerchtein E
- Geurts FJM
- Giagu S
- Giakoumopoulou V
- Giannetti P
- Gibbons LK
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- Giromini P
- Giunta M
- Giurgiu G
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- Glagolev V
- Glenzinski D
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- Goncharov M
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- Gorelov I
- Goshaw AT
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- Gottschalk E
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- Griso SP
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- Gunay-Unalan Z
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- Halyo V
- Hamaguchi A
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- Hanlon J
- Happacher F
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- Hare D
- Hare M
- Harel A
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- Harris RM
- Hatakeyama K
- Haupt J
- Hays C
- Hebda P
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- Heinrich J
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- Zucchelli S Zucchelli Slli Sira D
- Zucchelli SZanetti A
- Zuranski A
- Publication venue
- 'American Physical Society (APS)'
- Publication date
- 01/01/2011
- Field of study
We report measurements of the resonance properties of Lambda_c(2595)+ and
Lambda_c(2625)+ baryons in their decays to Lambda_c+ pi+ pi- as well as
Sigma_c(2455)++,0 and Sigma_c(2520)++,0 baryons in their decays to Lambda_c+
pi+/- final states. These measurements are performed using data corresponding
to 5.2/fb of integrated luminosity from ppbar collisions at sqrt(s) = 1.96 TeV,
collected with the CDF II detector at the Fermilab Tevatron. Exploiting the
largest available charmed baryon sample, we measure masses and decay widths
with uncertainties comparable to the world averages for Sigma_c states, and
significantly smaller uncertainties than the world averages for excited
Lambda_c+ states.Comment: added one reference and one table, changed order of figures, 17
pages, 15 figure
Search for a New Heavy Gauge Boson Wprime with Electron + missing ET Event Signature in ppbar collisions at sqrt(s)=1.96 TeV
- Author
- Aaltonen T
- Abdullin S
- Acosta D
- Acosta JG
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- Jayatilaka B
- Jenkins M
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- Johnson KF
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- Jones M
- Jones M
- Joo KK
- Joshi U
- Jun SY
- Jun SY
- Junk TR
- Kaadze K
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- Kamon T
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- Keller J
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- Khotilovich V
- Khukhunaishvili A
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- Klapoetke K
- Klima B
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- Klute M
- Kolb J
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- Kondo K
- Kong DJ
- Konigsberg J
- Konigsberg J
- Korytov A
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- Kousouris K
- Koybasi O
- Kramer L
- Kravchenko I
- Kreis B
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- Kubik A
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- Kurata M
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- Kwan S
- Kwang S
- Kypreos T
- Laasanen AT
- Laasanen AT
- Lacroix F
- Lae CK
- Laird E
- Lami S
- Lammel S
- Lancaster M
- Lander RL
- Lange D
- Lannon K
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- Lath A
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- Lazzizzera I
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- Litvintsev DO
- Liu C
- Liu C
- Liu JH
- Liu Q
- Liu T
- Liu Y
- Liu YF
- Lockwitz S
- Lockyer NS
- Loginov A
- Loizides C
- Lopez A
- Lopez EL
- Lu Y
- Lucchesi D
- Luckey PD
- Lueck J
- Lujan P
- Lukens P
- Lundstedt C
- Lungu G
- Luo W
- Lykken J
- Lynch S
- Lys J
- Lysak R
- Ma T
- Ma Y
- Madrak R
- Maeshima K
- Maeshima K
- Makhoul K
- Makouski M
- Maksimovic P
- Maksimovic P
- Malbouisson H
- Malik S
- Malik S
- Manca G
- Manousakis-Katsikakis A
- Mans J
- Maravin Y
- Margaroli F
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- Zucchelli SYun JC
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- Publication venue
- 'American Physical Society (APS)'
- Publication date
- 01/12/2010
- Field of study
We present a search for a new heavy charged vector boson W′ decaying
to an electron-neutrino pair in ppˉ collisions at a center-of-mass
energy of 1.96\unit{TeV}. The data were collected with the CDF II detector
and correspond to an integrated luminosity of 5.3\unit{fb}^{-1}. No
significant excess above the standard model expectation is observed and we set
upper limits on σ⋅B(W′→eν). Assuming standard
model couplings to fermions and the neutrino from the W′ boson decay to
be light, we exclude a W′ boson with mass less than
1.12\unit{TeV/}c^2 at the 95\unit{%} confidence level.Comment: 7 pages, 2 figures Submitted to PR
Azimuthal anisotropy of charged particles at high transverse momenta in PbPb collisions at sqrt(s[NN]) = 2.76 TeV
- Author
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- Yetkin T
- Yi K
- Yildirim E
- Yilmaz Y
- Yohay R
- Yoo HD
- Yoo J
- Yoon AS
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- Yumiceva F
- Yun JC
- Zabel J
- Zabi A
- Zablocki J
- Zaganidis N
- Zakaria M
- Zalewski P
- Zanetti M
- Zang J
- Zarubin A
- Zatserklyaniy A
- Zeinali M
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- Zeuner WD
- Zeyrek M
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- Zumerle G
- Zuranski A
- Publication venue
- 'American Physical Society (APS)'
- Publication date
- 01/01/2012
- Field of study
The azimuthal anisotropy of charged particles in PbPb collisions at
nucleon-nucleon center-of-mass energy of 2.76 TeV is measured with the CMS
detector at the LHC over an extended transverse momentum (pt) range up to
approximately 60 GeV. The data cover both the low-pt region associated with
hydrodynamic flow phenomena and the high-pt region where the anisotropies may
reflect the path-length dependence of parton energy loss in the created medium.
The anisotropy parameter (v2) of the particles is extracted by correlating
charged tracks with respect to the event-plane reconstructed by using the
energy deposited in forward-angle calorimeters. For the six bins of collision
centrality studied, spanning the range of 0-60% most-central events, the
observed v2 values are found to first increase with pt, reaching a maximum
around pt = 3 GeV, and then to gradually decrease to almost zero, with the
decline persisting up to at least pt = 40 GeV over the full centrality range
measured.Comment: Replaced with published version. Added journal reference and DO
Performance of the CMS Cathode Strip Chambers with Cosmic Rays
- Author
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- Publication venue
- 'IOP Publishing'
- Publication date
- 01/01/2009
- Field of study
The Cathode Strip Chambers (CSCs) constitute the primary muon tracking device
in the CMS endcaps. Their performance has been evaluated using data taken
during a cosmic ray run in fall 2008. Measured noise levels are low, with the
number of noisy channels well below 1%. Coordinate resolution was measured for
all types of chambers, and fall in the range 47 microns to 243 microns. The
efficiencies for local charged track triggers, for hit and for segments
reconstruction were measured, and are above 99%. The timing resolution per
layer is approximately 5 ns
Compressed representation of a partially defined integer function over multiple arguments
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- Publication venue
- Publication date
- 01/01/2013
- Field of study
In OLAP (OnLine Analitical Processing) data are analysed in an n-dimensional cube. The cube may be represented as a partially defined function over n arguments. Considering that often the function is not defined everywhere, we ask: is there a known way of representing the function or the points in which it is defined, in a more compact manner than the trivial one
Measurement of jet fragmentation into charged particles in pp and PbPb collisions at sqrt(s[NN]) = 2.76 TeV
- Author
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- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/2012
- Field of study
Jet fragmentation in pp and PbPb collisions at a centre-of-mass energy of
2.76 TeV per nucleon pair was studied using data collected with the CMS
detector at the LHC. Fragmentation functions are constructed using
charged-particle tracks with transverse momenta pt > 4 GeV for dijet events
with a leading jet of pt > 100 GeV. The fragmentation functions in PbPb events
are compared to those in pp data as a function of collision centrality, as well
as dijet-pt imbalance. Special emphasis is placed on the most central PbPb
events including dijets with unbalanced momentum, indicative of energy loss of
the hard scattered parent partons. The fragmentation patterns for both the
leading and subleading jets in PbPb collisions agree with those seen in pp data
at 2.76 TeV. The results provide evidence that, despite the large parton energy
loss observed in PbPb collisions, the partition of the remaining momentum
within the jet cone into high-pt particles is not strongly modified in
comparison to that observed for jets in vacuum.Comment: Submitted to the Journal of High Energy Physic
Search for new phenomena in final states with an energetic jet and large missing transverse momentum in pp collisions at √ s = 8 TeV with the ATLAS detector
- Author
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- Zou R
- Zu Theenhausen HM
- Zwalinski L
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 01/01/2015
- Field of study
Results of a search for new phenomena in final states with an energetic jet and large missing transverse momentum are reported. The search uses 20.3 fb−1 of √ s = 8 TeV data collected in 2012 with the ATLAS detector at the LHC. Events are required to have at least one jet with pT > 120 GeV and no leptons. Nine signal regions are considered with increasing missing transverse momentum requirements between Emiss T > 150 GeV and Emiss T > 700 GeV. Good agreement is observed between the number of events in data and Standard Model expectations. The results are translated into exclusion limits on models with either large extra spatial dimensions, pair production of weakly interacting dark matter candidates, or production of very light gravitinos in a gauge-mediated supersymmetric model. In addition, limits on the production of an invisibly decaying Higgs-like boson leading to similar topologies in the final state are presente
The Genetics of Adaptation for Eight Microvirid Bacteriophages
- Author
- AJ Betancourt
- AJ Betancourt
- AS Perelson
- CA Macken
- CA Macken
- CJ Beisel
- D Rokyta
- Darin R. Rokyta
- DM Weinreich
- DR Rokyta
- DR Rokyta
- DR Rokyta
- DR Rokyta
- GP Wagner
- HA Orr
- HA Orr
- HA Orr
- HA Orr
- HA Orr
- HA Orr
- HA Orr
- HA Wichman
- HA Wichman
- HA Wichman
- Holly A. Wichman
- IN Wang
- J Maynard Smith
- JAGM Visser de
- JD Thompson
- JH Gillespie
- JH Gillespie
- JH Gillespie
- JJ Bull
- JJ Bull
- JJ Bull
- JJ Bull
- JM Cuevas
- JP Bollback
- JP Huelsenbeck
- JP Huelsenbeck
- K Kichler Holder
- KM Pepin
- L Perfeito
- M Hayashi
- M Inagaki
- M Kirschner
- M Travisano
- P Joyce
- PD Baas
- PF Stadler
- R Kassen
- R McKenna
- R McKenna
- R Sanjuán
- R Suzuki
- RA Fisher
- RC MacLean
- RC McBride
- RE Lenski
- RE Lenski
- S Kauffman
- SA Kauffman
- SA Kauffman
- SF Elena
- ST Abedon
- V Minin
- VS Cooper
- WD Crill
- Zaid Abdo
- Publication venue
- Springer-Verlag
- Publication date
- 01/01/2009
- Field of study
Theories of adaptive molecular evolution have recently experienced significant expansion, and their predictions and assumptions have begun to be subjected to rigorous empirical testing. However, these theories focus largely on predicting the first event in adaptive evolution, the fixation of a single beneficial mutation. To address long-term adaptation it is necessary to include new assumptions, but empirical data are needed for guidance. To empirically characterize the general properties of adaptive walks, eight recently isolated relatives of the single-stranded DNA (ssDNA) bacteriophage φX174 (family Microviridae) were adapted to identical selective conditions. Three of the eight genotypes were adapted in replicate, for a total of 11 adaptive walks. We measured fitness improvement and identified the genetic changes underlying the observed adaptation. Nearly all phages were evolvable; nine of the 11 lineages showed a significant increase in fitness. However, fitness plateaued quickly, and adaptation was achieved through only three substitutions on average. Parallel evolution was rampant, both across replicates of the same genotype as well as across different genotypes, yet adaptation of replicates never proceeded through the exact same set of mutations. Despite this, final fitnesses did not vary significantly among replicates. Final fitnesses did vary significantly across genotypes but not across phylogenetic groupings of genotypes. A positive correlation was found between the number of substitutions in an adaptive walk and the magnitude of fitness improvement, but no correlation was found between starting and ending fitness. These results provide an empirical framework for future adaptation theory
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