120 research outputs found
IL-33 induction and signaling are controlled by glutaredoxin-1 in mouse macrophages
<div><p>Interleukin (IL)-33 is an interleukin-1 like cytokine that enhances Th2 responses and mediates mucosal immunity and allergic inflammation but the mechanism regulating endogenous IL-33 production are still under investigation. In macrophages, lipopolysaccharide (LPS) administration resulted in marked induction of IL-33 mRNA that was blunted in macrophages from glutaredoxin-1 (Glrx) knockout mice and in RAW264.7 macrophages with Glrx knockdown by siRNA. Glutaredoxin-1 is a small cytosolic thioltransferase that controls a reversible protein thiol modification, S-glutationylation (protein-GSH adducts), thereby regulating redox signaling. In this study, we examined the mechanism of Glrx regulation of endogenous IL-33 induction in macrophages. Glrx knockdown resulted in impaired de-glutathionylation of TRAF6, which is required for TRAF6 activation, and inhibited downstream IKKβ and NF-κB activation. Inhibitors of NF-κB suppressed IL-33 induction and chromatin IP sequencing data analysis confirmed that IL-33 is an NF-κB-responsive gene. Since TRAF6-NF-κB activation is also essential for IL-33 signaling through its receptor, ST2L, we next tested the involvement of Glrx in exogenous IL-33 responses in RAW264.7 cells. Recombinant IL-33 (rIL-33) administration induced IL-33 mRNA expression in RAW264.7 macrophages, and this was inhibited by Glrx knockdown. Interestingly, rIL-33-induced IL-33 protein was identified as the 20 kDa cleaved form whereas LPS-induced IL-33 protein was identified as full-length IL-33, which may be less active than the cleaved form. In a clinically-relevant mouse model of asthma, intra-tracheal cockroach antigen treatment induced Glrx protein in wild type mouse lungs but Glrx induction was attenuated in IL-33 knockout mouse lungs, suggesting that IL-33 may regulate Glrx induction <i>in vivo</i> in response to allergen challenge. In summary, our data reveal a novel mechanism by which Glrx controls both LPS- and IL-33-mediated NF-κB activation leading to IL-33 production, and paracrine IL-33 can induce Glrx to further regulate inflammatory reactions.</p></div
Nuclear dependence coefficient for the Drell-Yan and J/ production
Define the nuclear dependence coefficient in terms of ratio
of transverse momentum spectrum in hadron-nucleus and in hadron-nucleon
collisions: . We argue that in small region, the
for the Drell-Yan and J/ production is given by a universal function:\
, where parameters a and b are completely determined by either
calculable quantities or independently measurable physical observables. We
demonstrate that this universal function is insensitive to the
A for normal nuclear targets. For a color deconfined nuclear medium, the
becomes strongly dependent on the A. We also show that our
for the Drell-Yan process is naturally linked to perturbatively
calculated at large without any free parameters, and the
is consistent with E772 data for all .Comment: latex, 28 pages, 10 figures, updated two figures, and add more
discussion
Automorphic Equivalence within Gapped Phases of Quantum Lattice Systems
Gapped ground states of quantum spin systems have been referred to in the
physics literature as being `in the same phase' if there exists a family of
Hamiltonians H(s), with finite range interactions depending continuously on , such that for each , H(s) has a non-vanishing gap above its
ground state and with the two initial states being the ground states of H(0)
and H(1), respectively. In this work, we give precise conditions under which
any two gapped ground states of a given quantum spin system that 'belong to the
same phase' are automorphically equivalent and show that this equivalence can
be implemented as a flow generated by an -dependent interaction which decays
faster than any power law (in fact, almost exponentially). The flow is
constructed using Hastings' 'quasi-adiabatic evolution' technique, of which we
give a proof extended to infinite-dimensional Hilbert spaces. In addition, we
derive a general result about the locality properties of the effect of
perturbations of the dynamics for quantum systems with a quasi-local structure
and prove that the flow, which we call the {\em spectral flow}, connecting the
gapped ground states in the same phase, satisfies a Lieb-Robinson bound. As a
result, we obtain that, in the thermodynamic limit, the spectral flow converges
to a co-cycle of automorphisms of the algebra of quasi-local observables of the
infinite spin system. This proves that the ground state phase structure is
preserved along the curve of models .Comment: Updated acknowledgments and new email address of S
Long-Range Forces of QCD
We consider the scattering of two color dipoles (e.g., heavy quarkonium
states) at low energy - a QCD analog of Van der Waals interaction. Even though
the couplings of the dipoles to the gluon field can be described in
perturbation theory, which leads to the potential proportional to
(N_c^2-1)/R^{7}, at large distances R the interaction becomes totally
non-perturbative. Low-energy QCD theorems are used to evaluate the leading
long-distance contribution \sim (N_f^2-1)/(11N_c - 2N_f)^2 R^{-5/2} exp(-2 \mu
R) (\mu is the Goldstone boson mass), which is shown to arise from the
correlated two-boson exchange. The sum rule which relates the overall strength
of the interaction to the energy density of QCD vacuum is derived.
Surprisingly, we find that when the size of the dipoles shrinks to zero (the
heavy quark limit in the case of quarkonia), the non-perturbative part of the
interaction vanishes more slowly than the perturbative part as a consequence of
scale anomaly. As an application, we evaluate elastic \pi J/\psi and \pi J/\psi
\to \pi \psi' cross sections.Comment: 16pages, 9 eps figures; discussion extended, 2 new references added,
to appear in Phys.Rev.
Formation of dense partonic matter in relativistic nucleus-nucleus collisions at RHIC: Experimental evaluation by the PHENIX collaboration
Extensive experimental data from high-energy nucleus-nucleus collisions were
recorded using the PHENIX detector at the Relativistic Heavy Ion Collider
(RHIC). The comprehensive set of measurements from the first three years of
RHIC operation includes charged particle multiplicities, transverse energy,
yield ratios and spectra of identified hadrons in a wide range of transverse
momenta (p_T), elliptic flow, two-particle correlations, non-statistical
fluctuations, and suppression of particle production at high p_T. The results
are examined with an emphasis on implications for the formation of a new state
of dense matter. We find that the state of matter created at RHIC cannot be
described in terms of ordinary color neutral hadrons.Comment: 510 authors, 127 pages text, 56 figures, 1 tables, LaTeX. Submitted
to Nuclear Physics A as a regular article; v3 has minor changes in response
to referee comments. Plain text data tables for the points plotted in figures
for this and previous PHENIX publications are (or will be) publicly available
at http://www.phenix.bnl.gov/papers.htm
Experimental and Theoretical Challenges in the Search for the Quark Gluon Plasma: The STAR Collaboration's Critical Assessment of the Evidence from RHIC Collisions
We review the most important experimental results from the first three years
of nucleus-nucleus collision studies at RHIC, with emphasis on results from the
STAR experiment, and we assess their interpretation and comparison to theory.
The theory-experiment comparison suggests that central Au+Au collisions at RHIC
produce dense, rapidly thermalizing matter characterized by: (1) initial energy
densities above the critical values predicted by lattice QCD for establishment
of a Quark-Gluon Plasma (QGP); (2) nearly ideal fluid flow, marked by
constituent interactions of very short mean free path, established most
probably at a stage preceding hadron formation; and (3) opacity to jets. Many
of the observations are consistent with models incorporating QGP formation in
the early collision stages, and have not found ready explanation in a hadronic
framework. However, the measurements themselves do not yet establish
unequivocal evidence for a transition to this new form of matter. The
theoretical treatment of the collision evolution, despite impressive successes,
invokes a suite of distinct models, degrees of freedom and assumptions of as
yet unknown quantitative consequence. We pose a set of important open
questions, and suggest additional measurements, at least some of which should
be addressed in order to establish a compelling basis to conclude definitively
that thermalized, deconfined quark-gluon matter has been produced at RHIC.Comment: 101 pages, 37 figures; revised version to Nucl. Phys.
Late nitrogen application enhances spikelet number in indica hybrid rice (Oryza sativa L.)
ABSTRACT To increase rice yield potential, field experiments were conducted in farmers’ paddies in 2011 and 2012 to evaluate the effects of different nitrogen applications on the yield and panicle components of three typical indica hybrid rice varieties in Sichuan Province. The number of grains per panicle resulting from late nitrogen application (LA) was 12 % greater than that obtained from traditional nitrogen application (TA); this increase was the main source of improvements in yield. The number of surviving and differentiated spikelets (NSS and NDiS) resulting from LA was significantly higher than that measured under TA, especially for the Fyou498 cultivar, where the NSS and NDiS increased by 15 % and 14 %, respectively. Compared with TA, the number of degenerated secondary branches and the percentage of degenerated secondary branches (NDeSB and PDeSB) were significantly reduced by 9 % and 11 %, respectively, by LA. This is the first study to demonstrate that an increase in NSS and a decrease in NDeSB lead to yield-improving effects attributable to LA. The grain yields of different varieties ranged from 9225.6 to 9408.7 kg ha−1, the PDeSB was as high as 31 %, and the number of surviving secondary branches (NSSB) was significantly and positively correlated with NSS. These data indicate that the yield of indica hybrid rice has considerable potential for being improved, and increasing NSSB is key to increasing NSS and improving the grain yield. These improvements should be pursued so as to increase the yield of hybrid rice to ensure both food security and sustainable agricultural development
Viral afterlife: SARS-CoV-2 as a reservoir of immunomimetic peptides that reassemble into proinflammatory supramolecular complexes
It is unclear how severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection leads to the strong but ineffective inflammatory response that characterizes severe Coronavirus disease 2019 (COVID-19), with amplified immune activation in diverse cell types, including cells without angiotensin-converting enzyme 2 receptors necessary for infection. Proteolytic degradation of SARS-CoV-2 virions is a milestone in host viral clearance, but the impact of remnant viral peptide fragments from high viral loads is not known. Here, we examine the inflammatory capacity of fragmented viral components from the perspective of supramolecular self-organization in the infected host environment. Interestingly, a machine learning analysis to SARS-CoV-2 proteome reveals sequence motifs that mimic host antimicrobial peptides (xenoAMPs), especially highly cationic human cathelicidin LL-37 capable of augmenting inflammation. Such xenoAMPs are strongly enriched in SARS-CoV-2 relative to low-pathogenicity coronaviruses. Moreover, xenoAMPs from SARS-CoV-2 but not low-pathogenicity homologs assemble double-stranded RNA (dsRNA) into nanocrystalline complexes with lattice constants commensurate with the steric size of Toll-like receptor (TLR)-3 and therefore capable of multivalent binding. Such complexes amplify cytokine secretion in diverse uninfected cell types in culture (epithelial cells, endothelial cells, keratinocytes, monocytes, and macrophages), similar to cathelicidin’s role in rheumatoid arthritis and lupus. The induced transcriptome matches well with the global gene expression pattern in COVID-19, despite using <0.3% of the viral proteome. Delivery of these complexes to uninfected mice boosts plasma interleukin-6 and CXCL1 levels as observed in COVID-19 patients
Risk profiles and one-year outcomes of patients with newly diagnosed atrial fibrillation in India: Insights from the GARFIELD-AF Registry.
BACKGROUND: The Global Anticoagulant Registry in the FIELD-Atrial Fibrillation (GARFIELD-AF) is an ongoing prospective noninterventional registry, which is providing important information on the baseline characteristics, treatment patterns, and 1-year outcomes in patients with newly diagnosed non-valvular atrial fibrillation (NVAF). This report describes data from Indian patients recruited in this registry. METHODS AND RESULTS: A total of 52,014 patients with newly diagnosed AF were enrolled globally; of these, 1388 patients were recruited from 26 sites within India (2012-2016). In India, the mean age was 65.8 years at diagnosis of NVAF. Hypertension was the most prevalent risk factor for AF, present in 68.5% of patients from India and in 76.3% of patients globally (P < 0.001). Diabetes and coronary artery disease (CAD) were prevalent in 36.2% and 28.1% of patients as compared with global prevalence of 22.2% and 21.6%, respectively (P < 0.001 for both). Antiplatelet therapy was the most common antithrombotic treatment in India. With increasing stroke risk, however, patients were more likely to receive oral anticoagulant therapy [mainly vitamin K antagonist (VKA)], but average international normalized ratio (INR) was lower among Indian patients [median INR value 1.6 (interquartile range {IQR}: 1.3-2.3) versus 2.3 (IQR 1.8-2.8) (P < 0.001)]. Compared with other countries, patients from India had markedly higher rates of all-cause mortality [7.68 per 100 person-years (95% confidence interval 6.32-9.35) vs 4.34 (4.16-4.53), P < 0.0001], while rates of stroke/systemic embolism and major bleeding were lower after 1 year of follow-up. CONCLUSION: Compared to previously published registries from India, the GARFIELD-AF registry describes clinical profiles and outcomes in Indian patients with AF of a different etiology. The registry data show that compared to the rest of the world, Indian AF patients are younger in age and have more diabetes and CAD. Patients with a higher stroke risk are more likely to receive anticoagulation therapy with VKA but are underdosed compared with the global average in the GARFIELD-AF. CLINICAL TRIAL REGISTRATION-URL: http://www.clinicaltrials.gov. Unique identifier: NCT01090362
J/psi Production as a Function of Charged Particle Multiplicity in pp Collisions at sqrt{s} = 7 TeV
The ALICE collaboration reports the measurement of the inclusive J/psi yield
as a function of charged particle pseudorapidity density dN_{ch}/deta in pp
collisions at sqrt{s} = 7 TeV at the LHC. J/psi particles are detected for p_t
> 0, in the rapidity interval |y| < 0.9 via decay into e+e-, and in the
interval 2.5 < y < 4.0 via decay into mu+mu- pairs. An approximately linear
increase of the J/psi yields normalized to their event average
(dN_{J/psi}/dy)/ with (dN_{ch}/deta)/ is observed
in both rapidity ranges, where dN_{ch}/deta is measured within |eta| < 1 and
p_t > 0. In the highest multiplicity interval with = 24.1,
corresponding to four times the minimum bias multiplicity density, an
enhancement relative to the minimum bias J/psi yield by a factor of about 5 at
2.5 < y < 4 (8 at |y| < 0.9) is observed.Comment: Submitted to Phys. Lett.
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