Fish and Zooplankton Distributions in a Seasonally Hypoxic Fjord

Hypoxia has been identified as a major threat to marine ecosystem health in the world’s coastal waters including Puget Sound. This study is evaluating the potential effects of hypoxia on fish and zooplankton distributions in Hood Canal, WA, using multifrequency acoustics and net sampling. Field surveys were conducted monthly from June to October in 2012 and 2013 to characterize pre-, during, and post-hypoxia nekton distributions at four sites along the Canal. Using the repeated samplings and high-resolution survey data, we are examining how seasonal and inter-annual difference in the timing and intensity of hypoxia affects distributions of predators (primarily Pacific herring and Pacific hake) and prey (primarily copepods and euphausiids). Depth of the zooplankton backscatter layer changed seasonally with hypoxia intensity. Toward late-summer, the daytime zooplankton layer was closer to the surface, increasing the vertical separation between zooplankton and fish. In spite of low oxygen levels in late-summer, fish remained in low-oxygen regions of Hood Canal. This suggests a decrease in energy flow toward higher trophic level during hypoxia

Estimating Hypoxic Volume in the Chesapeake Bay Using Two Continuously Sampled Oxygen Profiles

Low levels of dissolved oxygen (DO) occur in many embayments throughout the world and have numerous detrimental effects on biota. Although measurement of in situ DO is straightforward with modern instrumentation, quantifying the volume of water in a given embayment that is hypoxic (hypoxic volume (HV)) is a more difficult task; however, this information is critical for determining whether management efforts to increase DO are having an overall impact. This paper uses output from a three‐dimensional numerical model to demonstrate that HV in Chesapeake Bay can be estimated well with as few as two vertical profiles. In addition, the cumulative hypoxic volume (HVC; the total amount of hypoxia in a given year) can be calculated with relatively low uncertainty

Temporal shifts in seabird populations and spatial coherence with prey in the southeastern Bering Sea

The Bering Sea is a highly productive ecosystem with abundant prey populations in the summer that support some of the largest seabird colonies in the Northern Hemisphere. In the fall, the Bering Sea is used by large numbers of migrants and post-breeding seabirds. We used over 22000 km of vessel-based surveys carried out during summer (June to July) and fall (late August to October) from 2008 to 2010 over the southeast Bering Sea to examine annual and seasonal changes in seabird communities and spatial relationships with concurrently sampled prey. Deep-diving murres Uria spp., shallow-diving shearwaters Ardenna spp., and surface-foraging northern fulmars Fulmarus glacialis and kittiwakes Rissa spp. dominated summer and fall seabird communities. Seabird densities in summer were generally less than half of fall densities and species richness was lower in summer than in fall. Summer seabird densities had high interannual variation (highest in 2009), whereas fall densities varied little among years. Seabirds were more spatially clustered around breeding colonies and the outer continental shelf in the summer and then dispersed throughout the middle and inner shelf in fall. In summer, the abundance of age-1 walleye pollock Gadus chalcogrammus along with spatial (latitude and longitude) and temporal (year) variables best explained broad-scale seabird distribution. In contrast, seabirds in fall had weaker associations with spatial and temporal variables and stronger associations with different prey species or groups. Our results demonstrate seasonal shifts in the distribution and foraging patterns of seabirds in the southeastern Bering Sea with a greater dependence on prey occurring over the middle and inner shelf in fall.Keywords: Spatial models, Seabird, Seasonal patterns, Krill, Forage fis

Seasonal and interannual effects of hypoxia on fish habitat quality in central Lake Erie

1. Hypoxia occurs seasonally in many stratified coastal marine and freshwater ecosystems when bottom dissolved oxygen (DO) concentrations are depleted below 2–3 mg O 2  L −1 .2. We evaluated the effects of hypoxia on fish habitat quality in the central basin of Lake Erie from 1987 to 2005, using bioenergetic growth rate potential (GRP) as a proxy for habitat quality. We compared the effect of hypoxia on habitat quality of (i) rainbow smelt, Osmerus mordax mordax Mitchill (young-of-year, YOY, and adult), a cold-water planktivore, (ii) emerald shiner, Notropis atherinoides Rafinesque (adult), a warm-water planktivore, (iii) yellow perch, Perca flavescens Mitchill (YOY and adult), a cool-water benthopelagic omnivore and (iv) round goby Neogobius melanostomus Pallas (adult) a eurythermal benthivore. Annual thermal and DO profiles were generated from 1D thermal and DO hydrodynamics models developed for Lake Erie’s central basin.3. Hypoxia occurred annually, typically from mid-July to mid-October, which spatially and temporally overlaps with otherwise high benthic habitat quality. Hypoxia reduced the habitat quality across fish species and life stages, but the magnitude of the reduction varied both among and within species because of the differences in tolerance to low DO levels and warm-water temperatures.4. Across years, trends in habitat quality mirrored trends in phosphorus concentration and water column oxygen demand in central Lake Erie. The per cent reduction in habitat quality owing to hypoxia was greatest for adult rainbow smelt and round goby (mean: −35%), followed by adult emerald shiner (mean: −12%), YOY rainbow smelt (mean: −10%) and YOY and adult yellow perch (mean: −8.5%).5. Our results highlight the importance of differential spatiotemporally interactive effects of DO and temperature on relative fish habitat quality and quantity. These effects have the potential to influence the performance of individual fish species as well as population dynamics, trophic interactions and fish community structure.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/79212/1/j.1365-2427.2010.02504.x.pd

Microbial respiration with chlorine oxyanions: diversity and physiological and biochemical properties of chlorate- and perchlorate-reducing microorganisms

Chlorine oxyanions are valuable electron acceptors for microorganisms. Recent findings have shed light on the natural formation of chlorine oxyanions in the environment. These suggest a permanent introduction of respective compounds on Earth, long before their anthropogenic manufacture. Microorganisms that are able to grow by the reduction of chlorate and perchlorate are affiliated with phylogenetically diverse lineages, spanning from the Proteobacteria to the Firmicutes and archaeal microorganisms. Microbial reduction of chlorine oxyanions can be found in diverse environments and different environmental conditions (temperature, salinities, pH). It commonly involves the enzymes perchlorate reductase (Pcr) or chlorate reductase (Clr) and chlorite dismutase (Cld). Horizontal gene transfer seems to play an important role for the acquisition of functional genes. Novel and efficient Clds were isolated from microorganisms incapable of growing on chlorine oxyanions. Archaea seem to use a periplasmic Nar-type reductase (pNar) for perchlorate reduction and lack a functional Cld. Chlorite is possibly eliminated by alternative (abiotic) reactions. This was already demonstrated for Archaeoglobus fulgidus, which uses reduced sulfur compounds to detoxify chlorite. A broad biochemical diversity of the trait, its environmental dispersal, and the occurrence of relevant enzymes in diverse lineages may indicate early adaptations of life toward chlorine oxyanions on Earth.Financial support from the Technology Foundation STW, Applied Science Division of the Netherlands Science Foundation NWO (Project 08053) and Shell Global Solutions International BV. Research of A.J.M. Stams is financed by an ERC grant (Project 323009) and by a Gravitation grant (Project 024.002.002) from the Netherlands Ministry of Education, Culture, and Scienc

Measurement of vector boson scattering and constraints on anomalous quartic couplings from events with four leptons and two jets in proton-proton collisions at root s=13 TeV

Peer reviewe

Search for dijet resonances in proton-proton collisions at root s=13 TeV and constraints on dark matter and other models

Correction: DOI:10.1016/j.physletb.2017.09.029Peer reviewe

Search for new physics with dijet angular distributions in proton-proton collisions at root S = 13 TeV

Peer reviewe

Demographic, clinical and antibody characteristics of patients with digital ulcers in systemic sclerosis: data from the DUO Registry

OBJECTIVES: The Digital Ulcers Outcome (DUO) Registry was designed to describe the clinical and antibody characteristics, disease course and outcomes of patients with digital ulcers associated with systemic sclerosis (SSc). METHODS: The DUO Registry is a European, prospective, multicentre, observational, registry of SSc patients with ongoing digital ulcer disease, irrespective of treatment regimen. Data collected included demographics, SSc duration, SSc subset, internal organ manifestations, autoantibodies, previous and ongoing interventions and complications related to digital ulcers. RESULTS: Up to 19 November 2010 a total of 2439 patients had enrolled into the registry. Most were classified as either limited cutaneous SSc (lcSSc; 52.2%) or diffuse cutaneous SSc (dcSSc; 36.9%). Digital ulcers developed earlier in patients with dcSSc compared with lcSSc. Almost all patients (95.7%) tested positive for antinuclear antibodies, 45.2% for anti-scleroderma-70 and 43.6% for anticentromere antibodies (ACA). The first digital ulcer in the anti-scleroderma-70-positive patient cohort occurred approximately 5 years earlier than the ACA-positive patient group. CONCLUSIONS: This study provides data from a large cohort of SSc patients with a history of digital ulcers. The early occurrence and high frequency of digital ulcer complications are especially seen in patients with dcSSc and/or anti-scleroderma-70 antibodies

Search for supersymmetry in proton-proton collisions at 13 TeV using identified top quarks

A search for supersymmetry is presented based on proton-proton collision events containing identified hadronically decaying top quarks, no leptons, and an imbalance p(T)(miss) in transverse momentum. The data were collected with the CMS detector at the CERN LHC at a center-of-mass energy of 13 TeV, and correspond to an integrated luminosity of 35.9 fb(-1). Search regions are defined in terms of the multiplicity of bottom quark jet and top quark candidates, the p(T)(miss) , the scalar sum of jet transverse momenta, and themT2 mass variable. No statistically significant excess of events is observed relative to the expectation from the standard model. Lower limits on the masses of supersymmetric particles are determined at 95% confidence level in the context of simplified models with top quark production. For a model with direct top squark pair production followed by the decay of each top squark to a top quark and a neutralino, top squark masses up to 1020 GeVand neutralino masses up to 430 GeVare excluded. For amodel with pair production of gluinos followed by the decay of each gluino to a top quark-antiquark pair and a neutralino, gluino masses up to 2040 GeVand neutralino masses up to 1150 GeVare excluded. These limits extend previous results.Peer reviewe