124 research outputs found
Automatic noninvasive measurement of systolic blood pressure using photoplethysmography
<p>Abstract</p> <p>Background</p> <p>Automatic measurement of arterial blood pressure is important, but the available commercial automatic blood pressure meters, mostly based on oscillometry, are of low accuracy.</p> <p>Methods</p> <p>In this study, we present a cuff-based technique for automatic measurement of systolic blood pressure, based on photoplethysmographic signals measured simultaneously in fingers of both hands. After inflating the pressure cuff to a level above systolic blood pressure in a relatively slow rate, it is slowly deflated. The cuff pressure for which the photoplethysmographic signal reappeared during the deflation of the pressure-cuff was taken as the systolic blood pressure. The algorithm for the detection of the photoplethysmographic signal involves: (1) determination of the time-segments in which the photoplethysmographic signal distal to the cuff is expected to appear, utilizing the photoplethysmographic signal in the free hand, and (2) discrimination between random fluctuations and photoplethysmographic pattern. The detected pulses in the time-segments were identified as photoplethysmographic pulses if they met two criteria, based on the pulse waveform and on the correlation between the signal in each segment and the signal in the two neighboring segments.</p> <p>Results</p> <p>Comparison of the photoplethysmographic-based automatic technique to sphygmomanometry, the reference standard, shows that the standard deviation of their differences was 3.7 mmHg. For subjects with systolic blood pressure above 130 mmHg the standard deviation was even lower, 2.9 mmHg. These values are much lower than the 8 mmHg value imposed by AAMI standard for automatic blood pressure meters.</p> <p>Conclusion</p> <p>The photoplethysmographic-based technique for automatic measurement of systolic blood pressure, and the algorithm which was presented in this study, seems to be accurate.</p
Iterative Design of a Simulation-Based Module for Teaching Evolution by Natural Selection
Background: This research builds on a previous study that looked at the effectiveness of a simulation-based module for teaching students about the process of evolution by natural selection. While the previous study showed that the module was successful in teaching how natural selection works, the research uncovered some weaknesses in the design. In this paper, we used design-based research to investigate how design changes to the module affected not only students’ understanding of the concepts but also their usage of misconceptions in the assessments. We present results from two studies. In study 1, we looked at gains in understanding on a pre and post-assessment for students who used the revised version of the module. We also examined misconception uses in their answer selections. In study 2, we compared the performance on a summative assessment between students who used the revised version and students who used the original version of the module. We also looked at misconception uses in their answer selections.
Results: In study 1, we saw a significant improvement in the pre-post assessment for students who used the revised version. In study 2, we did not find a significant difference on the overall performance outcome between students who used the revised and those that used the original version of the module. In both studies, however, we saw a lower use of misconceptions after students used the revised module. In particular, we saw less use of the adaptive mutation misconception, the belief that mutations are adaptive responses to the environment and are biased towards advantageous mutations. This is promising because in the previous study there was no evidence of decreased use of this misconception.
Conclusions: Students showed learning gains on all targeted key concepts, and reduced expression of all targeted misconceptions, which was not found previously for students using the older workbook version of the module. In particular, the revised version appears to help students overcome the adaptive mutation misconception. This article demonstrates how design-based research can contribute to the ongoing improvement of evidence-based instruction in undergraduate biology classrooms
A new assessment of graph construction competency for undergraduate biology students
With an increasing emphasis on teaching the skills and processes of science in the undergraduate biology classroom, working with and interpreting data has become an important part of the curriculum. Visual representations are a key tool when examining data, especially graphs. Undergraduate biology students notoriously have trouble both making good graphs and interpreting graphs. Yet, although there is an extensive literature on graph interpretation challenges amongst students, there has been much less work on the confusions students exhibit when constructing graphs.
On the path to creating tools to help teach graphing to biology students, we have been building a new performance-based assessment of graph construction competence. The assessment presents students a research question and asks them to make graphs to test a hypothesis drawn from that question. The graphs are auto-scored for a number of practices associated with making good graphs. The digital nature and auto-scoring has allowed us to provide this assessment and analyze results at larger scales than previous assessments, gathering data that will help focus teaching tools on the areas of highest need.
In this workshop, each participant will take one version of the graphing assessment themselves (about 20–30 minutes) and then we will discuss the experience. After talking about how well the assessment lines up to the graphing practices you look for in your students, the presenter will show data on where we find biology students struggle, drawn from students in a diverse set of classes and institutions. Bring your laptop (Mac or Windows only).Note: the creative commons license below is for the abstract and talk only, not the software
Epigenetic Profiling and Response to CD19 Chimeric Antigen Receptor T-Cell Therapy in B-Cell Malignancies
Background: Chimeric antigen receptor (CAR) T cells directed against CD19 (CART19) are effective in B-cell malignancies, but little is known about the molecular factors predicting clinical outcome of CART19 therapy. The increasingly recognized relevance of epigenetic changes in cancer immunology prompted us to determine the impact of the DNA methylation profiles of CART19 cells on the clinical course.
Methods: We recruited 114 patients with B-cell malignancies, comprising 77 patients with acute lymphoblastic leukemia and 37 patients with non-Hodgkin lymphoma who were treated with CART19 cells. Using a comprehensive DNA methylation microarray, we determined the epigenomic changes that occur in the patient T cells upon transduction of the CAR vector. The effects of the identified DNA methylation sites on clinical response, cytokine release syndrome, immune effector cell-associated neurotoxicity syndrome, event-free survival, and overall survival were assessed. All statistical tests were 2-sided.
Results: We identified 984 genomic sites with differential DNA methylation between CAR-untransduced and CAR-transduced T cells before infusion into the patient. Eighteen of these distinct epigenetic loci were associated with complete response (CR), adjusting by multiple testing. Using the sites linked to CR, an epigenetic signature, referred to hereafter as the EPICART signature, was established in the initial discovery cohort (n = 79), which was associated with CR (Fisher exact test, P < .001) and enhanced event-free survival (hazard ratio [HR] = 0.36; 95% confidence interval [CI] = 0.19 to 0.70; P = .002; log-rank P = .003) and overall survival (HR = 0.45; 95% CI = 0.20 to 0.99; P = .047; log-rank P = .04;). Most important, the EPICART profile maintained its clinical course predictive value in the validation cohort (n = 35), where it was associated with CR (Fisher exact test, P < .001) and enhanced overall survival (HR = 0.31; 95% CI = 0.11 to 0.84; P = .02; log-rank P = .02).
Conclusions: We show that the DNA methylation landscape of patient CART19 cells influences the efficacy of the cellular immunotherapy treatment in patients with B-cell malignancy.Supported by CERCA Programme/Generalitat de Catalunya, Health Department PERIS #SLT/002/16/00374, AGAUR-project #2017SGR1080; MCI/AEI/ERDF project #RTI2018-094049-B-I00; ERC EPIPHARM; Cellex Foundation; “la Caixa” Foundation (LCF/PR/GN18/51140001 and LCF/PR/GN18/50310007), RF-2016–02364388, Accelerator Award—Cancer Research UK/AIRC—INCAR Associazione Italiana Ricerca per la Ricerca sul Cancro (AIRC) Project 5 × 1000 no. 9962, AIRC IG 2018 id. 21724, AIRC MFAG id. 21769 and id. 20450; MIUR (Grant PRIN 2017); and RCR-2019–23669115
A Solvable Regime of Disorder and Interactions in Ballistic Nanostructures, Part I: Consequences for Coulomb Blockade
We provide a framework for analyzing the problem of interacting electrons in
a ballistic quantum dot with chaotic boundary conditions within an energy
(the Thouless energy) of the Fermi energy. Within this window we show that the
interactions can be characterized by Landau Fermi liquid parameters. When ,
the dimensionless conductance of the dot, is large, we find that the disordered
interacting problem can be solved in a saddle-point approximation which becomes
exact as (as in a large-N theory). The infinite theory shows a
transition to a strong-coupling phase characterized by the same order parameter
as in the Pomeranchuk transition in clean systems (a spontaneous
interaction-induced Fermi surface distortion), but smeared and pinned by
disorder. At finite , the two phases and critical point evolve into three
regimes in the plane -- weak- and strong-coupling regimes separated
by crossover lines from a quantum-critical regime controlled by the quantum
critical point. In the strong-coupling and quantum-critical regions, the
quasiparticle acquires a width of the same order as the level spacing
within a few 's of the Fermi energy due to coupling to collective
excitations. In the strong coupling regime if is odd, the dot will (if
isolated) cross over from the orthogonal to unitary ensemble for an
exponentially small external flux, or will (if strongly coupled to leads) break
time-reversal symmetry spontaneously.Comment: 33 pages, 14 figures. Very minor changes. We have clarified that we
are treating charge-channel instabilities in spinful systems, leaving
spin-channel instabilities for future work. No substantive results are
change
Random Matrix Theories in Quantum Physics: Common Concepts
We review the development of random-matrix theory (RMT) during the last
decade. We emphasize both the theoretical aspects, and the application of the
theory to a number of fields. These comprise chaotic and disordered systems,
the localization problem, many-body quantum systems, the Calogero-Sutherland
model, chiral symmetry breaking in QCD, and quantum gravity in two dimensions.
The review is preceded by a brief historical survey of the developments of RMT
and of localization theory since their inception. We emphasize the concepts
common to the above-mentioned fields as well as the great diversity of RMT. In
view of the universality of RMT, we suggest that the current development
signals the emergence of a new "statistical mechanics": Stochasticity and
general symmetry requirements lead to universal laws not based on dynamical
principles.Comment: 178 pages, Revtex, 45 figures, submitted to Physics Report
Accelerated surgery versus standard care in hip fracture (HIP ATTACK): an international, randomised, controlled trial
[Glosa hebrea al Pentateuco]. [Hebreo]. [Manuscrito]
Texto en hebreo; Letra del S. XVTít. tomado de Alonso-CortésEl incipit y el explicit no forman parte del texto propiamente, están añadidos con letra moderna en castellano, en el borde mismo de los fols. en la parte superior, y aparecen cortados; foliación del S. XVIII, a tinta, en la que está repetido el fol. 61 y entre el fol. 160 y 161 hay dos fols. sin numerar; hay otra foliación a lápiz moderna en los márgenes contrarios, en la que entre los fols. 42 y 43 hay uno sin numerar; caja de escritura 19,5 x 11,5 cm; 30 lín. por p.1. <El maestre sobre los cinco ... (fol. 1) ... Sobre los cinco libros. Fin. (fol. 190 v.)
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