The Energy-dependent Checkerboard Patterns in Cuprate Superconductors

Motivated by the recent scanning tunneling microscopy (STM) experiments [J. E. Hoffman {\it et al.}, Science {\bf 297}, 1148 (2002); K. McElroy {\it et al.}, Nature (to be published)], we investigate the real space local density of states (LDOS) induced by weak disorder in a d-wave superconductor. We first present the energy dependent LDOS images around a single weak defect at several energies, and then point out that the experimentally observed checkerboard pattern in the LDOS could be understood as a result of quasiparticle interferences by randomly distributed defects. It is also shown that the checkerboard pattern oriented along $45^0$ to the Cu-O bonds at low energies would transform to that oriented parallel to the Cu-O bonds at higher energies. This result is consistent with the experiments.Comment: 3 pages, 3 figure

Deforming, revolving and resolving - New paths in the string theory landscape

In this paper we investigate the properties of series of vacua in the string theory landscape. In particular, we study minima to the flux potential in type IIB compactifications on the mirror quintic. Using geometric transitions, we embed its one dimensional complex structure moduli space in that of another Calabi-Yau with h^{1,1}=86 and h^{2,1}=2. We then show how to construct infinite series of continuously connected minima to the mirror quintic potential by moving into this larger moduli space, applying its monodromies, and moving back. We provide an example of such series, and discuss their implications for the string theory landscape.Comment: 41 pages, 5 figures; minor corrections, published versio

Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research.Peer reviewe

History Teaches Us That Confronting Antibiotic Resistance Requires Stronger Global Collective Action

© 2015 American Society of Law, Medicine & Ethics, Inc. Antibiotic development and usage, and antibiotic resistance in particular, are today considered global concerns, simultaneously mandating local and global perspectives and actions. Yet such global considerations have not always been part of antibiotic policy formation, and those who attempt to formulate a globally coordinated response to antibiotic resistance will need to confront a history of heterogeneous, often uncoordinated, and at times conflicting reform efforts, whose legacies remain apparent today. Historical analysis permits us to highlight such entrenched trends and processes, helping to frame contemporary efforts to improve access, conservation and innovation.Peer Reviewe