Associations between Different Ozone Indicators and Cardiovascular Hospital Admission:A Time-Stratified Case-Crossover Analysis in Guangzhou, China

Epidemiological studies reported that ozone (O3) is associated with cardiovascular diseases. However, only few of these studies examined the impact of multiple O3 indicators on cardiovascular hospital admissions. This study aimed to explore and compare the impacts of different O3 indicators on cardiovascular hospital admissions in Guangzhou, China. Based upon the data on daily cardiovascular hospital admissions, air pollution, and meteorological factors in Guangzhou from 2014 to 2018, a time-stratified case-crossover design model was used to analyze the associations between different O3 indicators and cardiovascular hospital admissions. Moreover, the sensitivities of different age and gender groups were analyzed for the whole year and different seasons (i.e., warm and cold). During the warm season, for the single-pollutant model, the odds ratio (OR) value of cardiovascular hospital admissions was 1.0067 (95% confidence interval (CI): 1.0037, 1.0098) for every IQR increase in MDA8 O3 at a lag of five days. The effect of O3 on people over 60 year was stronger than that on the 15–60 years age group. Females were more sensitive than males to O3 exposure. These results provided valuable references for further scientific research and environmental improvement in Guangzhou. Given that short-term O3 exposure poses a threat to human health, the government should therefore pay attention to prevention and control policies to reduce and eliminate O3 pollution and protect human health.</p

Comparison of the association between different ozone indicators and daily respiratory hospitalization in Guangzhou, China

Background: Epidemiological studies have widely proven the impact of ozone (O3) on respiratory mortality, while only a few studies compared the association between different O3 indicators and health. Methods: This study explores the relationship between daily respiratory hospitalization and multiple ozone indicators in Guangzhou, China, from 2014 to 2018. It uses a time-stratified case–crossover design. Sensitivities of different age and gender groups were analyzed for the whole year, the warm and the cold periods. We compared the results from the single-day lag model and the moving average lag model. Results: The results showed that the maximum daily 8 h average ozone concentration (MDA8 O3) had a significant effect on the daily respiratory hospitalization. This effect was stronger than for the maximum daily 1 h average ozone concentration (MDA1 O3). The results further showed that O3 was positively associated with daily respiratory hospitalization in the warm season, while there was a significantly negative association in the cold season. Specifically, in the warm season, O3 has the most significant effect at lag 4 day, with the odds ratio (OR) equal to 1.0096 [95% confidence intervals (CI): 1.0032, 1.0161]. Moreover, at the lag 5 day, the effect of O3 on the 15–60 age group was less than that on people older than 60 years, with the OR value of 1.0135 (95% CI: 1.0041, 1.0231) for the 60+ age group; women were more sensitive than men to O3 exposure, with an OR value equal to 1.0094 (95% CI: 0.9992, 1.0196) for the female group. Conclusion: These results show that different O3 indicators measure different impacts on respiratory hospitalization admission. Their comparative analysis provided a more comprehensive insight into exploring associations between O3 exposure and respiratory health.</p

Genomic monitoring of SARS-CoV-2 uncovers an Nsp1 deletion variant that modulates type I interferon response

The SARS-CoV-2 virus, the causative agent of COVID-19, is undergoing constant mutation. Here, we utilized an integrative approach combining epidemiology, virus genome sequencing, clinical phenotyping, and experimental validation to locate mutations of clinical importance. We identified 35 recurrent variants, some of which are associated with clinical phenotypes related to severity. One variant, containing a deletion in the Nsp1-coding region (D500-532), was found in more than 20% of our sequenced samples and associates with higher RT-PCR cycle thresholds and lower serum IFN-beta levels of infected patients. Deletion variants in this locus were found in 37 countries worldwide, and viruses isolated from clinical samples or engineered by reverse genetics with related deletions in Nsp1 also induce lower IFN-beta responses in infected Calu-3 cells. Taken together, our virologic surveillance characterizes recurrent genetic diversity and identified mutations in Nsp1 of biological and clinical importance, which collectively may aid molecular diagnostics and drug design.Peer reviewe

Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research.Peer reviewe

Disaster Hashtags in Social Media

Social media is a rich data source for analyzing the social impact of hazard processes and human behavior in disaster situations; it is used by rescue agencies for coordination and by local governments for the distribution of official information. In this paper, we propose a method for data mining in Twitter to retrieve messages related to an event. We describe an automated process for the collection of hashtags highly related to the event and specific only to it. We compare our method with existing keyword-based methods and prove that hashtags are good markers for the separation of similar, simultaneous incidents; therefore, the retrieved messages have higher relevancy. The method uses disaster databases to find the location of an event and to estimate the impact area. The proposed method can also be adapted to retrieve messages about other types of events with a known location, such as riots, festivals and exhibitions

Temporal and Spatial Heterogeneity of PM2.5 Related to Meteorological and Socioeconomic Factors across China during 2000&ndash;2018

In recent years, air pollution caused by PM2.5 in China has become increasingly severe. This study applied a Bayesian space&ndash;time hierarchy model to reveal the spatiotemporal heterogeneity of the PM2.5 concentrations in China. In addition, the relationship between meteorological and socioeconomic factors and their interaction with PM2.5 during 2000&ndash;2018 was investigated based on the GeoDetector model. Results suggested that the concentration of PM2.5 across China first increased and then decreased between 2000 and 2018. Geographically, the North China Plain and the Yangtze River Delta were high PM2.5 pollution areas, while Northeast and Southwest China are regarded as low-risk areas for PM2.5 pollution. Meanwhile, in Northern and Southern China, the population density was the most important socioeconomic factor affecting PM2.5 with q values of 0.62 and 0.66, respectively; the main meteorological factors affecting PM2.5 were air temperature and vapor pressure, with q values of 0.64 and 0.68, respectively. These results are conducive to our in-depth understanding of the status of PM2.5 pollution in China and provide an important reference for the future direction of PM2.5 pollution control

Temporal and Spatial Evolution and Influencing Factors of Public Sentiment in Natural Disasters—A Case Study of Typhoon Haiyan

The public’s attitudes, emotions, and opinions reflect the state of society to a certain extent. Understanding the state and trends of public sentiment and effectively guiding the direction of sentiment are essential for maintaining social stability during disasters. Social media data have become the most effective resource for studying public sentiment. The TextBlob tool is used to calculate the sentiment value of tweets, and this research analyzed the public’s sentiment state during Typhoon Haiyan, used the biterm topic model (BTM) to classify topics, explored the changing process of public discussion topics at different stages during the disaster, and analyzed the differences in people’s discussion content under different sentiments. We also analyzed the spatial pattern of sentiment and quantitatively explored the influencing factors of the sentiment spatial differences. The results showed that the overall public sentiment during Typhoon Haiyan tended to be positive, that compared with positive tweets, negative tweets contained more serious disaster information and more urgent demand information, and that the number of tweets, population, and the proportion of the young and middle-aged populations were the dominant factors in the sentiment spatial differences