Innovations in Camera Trapping Technology and Approaches: The Integration of Citizen Science and Artificial Intelligence

Camera trapping has become an increasingly reliable and mainstream tool for surveying a diversity of wildlife species. Concurrent with this has been an increasing effort to involve the wider public in the research process, in an approach known as ‘citizen science’. To date, millions of people have contributed to research across a wide variety of disciplines as a result. Although their value for public engagement was recognised early on, camera traps were initially ill‐suited for citizen science. As camera trap technology has evolved, cameras have become more user‐friendly and the enormous quantities of data they now collect has led researchers to seek assistance in classifying footage. This has now made camera trap research a prime candidate for citizen science, as reflected by the large number of camera trap projects now integrating public participation. Researchers are also turning to Artificial Intelligence (AI) to assist with classification of footage. Although this rapidly‐advancing field is already proving a useful tool, accuracy is variable and AI does not provide the social and engagement benefits associated with citizen science approaches. We propose, as a solution, more efforts to combine citizen science with AI to improve classification accuracy and efficiency while maintaining public involvement

Partitioning the effects of habitat loss hunting and climate change on the endangered Chacoan peccary

Aim: Land-use change and overexploitation are major threats to biodiversity, and cli mate change will exert additional pressure in the 21st century. Although there are strong interactions between these threats, our understanding of the synergistic and compensatory effects on threatened species' range geography remains limited. Our aim was to disentangle the impact of habitat loss, hunting and climate change on spe cies, using the example of the endangered Chacoan peccary (Catagonus wagneri). Location: Gran Chaco ecoregion in South America. Methods: Using a large occurrence database, we integrated a time-calibrated species distribution model with a hunting pressure model to reconstruct changes in the distri bution of suitable peccary habitat between 1985 and 2015. We then used partitioning analysis to attribute the relative contribution of habitat change to land-use conver sion, climate change and varying hunting pressure. Results: Our results reveal widespread habitat deterioration, with only 11% of the habitat found in 2015 considered suitable and safe. Hunting pressure was the strong est single threat, yet most habitat deterioration (58%) was due to the combined, rather than individual, effects of the three drivers we assessed. Climate change would have led to a compensatory effect, increasing suitable habitat area, yet this effect was ne gated by the strongly negative and interacting threats of land-use change and hunting. Main Conclusions: Our study reveals the central role of overexploitation, which is often neglected in biogeographic assessments, and suggests that addressing overex ploitation has huge potential for increasing species' adaptive capacity in the face of climate and land-use change. More generally, we highlight the importance of jointly assessing extinction drivers to understand how species might fare in the 21st century. Here, we provide a simple and transferable framework to determine the separate and joint effects of three main drivers of biodiversity loss.Fil: Torres, Ricardo. Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Diversidad y Ecología Animal ; Argentina.Fil: Kuemmerle, Tobias. Humboldt-University Berlin. Integrative Research Institute for Transformations in Human Environment Systems. Geography Department; AlemaniaFil: Baumann, Matthias. Humboldt-University. Geography Department; Alemania.Fil: Romero Muñoz, Alfredo. Humboldt University. Geography Departament; Alemania. University of British Columbia. Institute for Resources, Environment and Sustainability (IRES); Canada. Helmholtz Centre for Environmental Research. Department Computational Landscape Ecology; Alemania. Transformations of Human-Environment Systems (IRI THESys). Integrative Research Institute; AlemaniaFil: Altrichter, Mariana. IUCN SSC Peccary Specialist Group; Suiza. Prescott College. Environmental Studies; Estados UnidosFil: Boaglio, Gabriel Ivan. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Diversidad y Ecología Animal; Argentina. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Instituto de Diversidad y Ecología Animal; ArgentinaFil: Cabral, Hugo. Universidade Estadual Paulista. Programa de Pós-Graduação em Biologia Animal; Brasil. Instituto de Investigación Biológica del Paraguay; ParaguayFil: Camino, Micaela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Ecología del Litoral. Laboratorio de Biología de la Conservación; ArgentinaFil: Campos Kraver, Juan M. University of Florida. College of Veterinary Medicine & Department of Wildlife Ecology and Conservation. Department of Large Animal Clinical Sciences; Estados UnidosFil: Giordano, Anthony. Society for the Preservation of Endangered Carnivores and their International Ecological Study (S.P.E.C.I.E.S); Estados Unidos. University of Los Angeles. Institute of the Environment and Sustainability. Center for Tropical Research; Estados UnidosFil: Cartes, José L. Guyra Paraguay, Parque del Río; ParaguayFil: Cuéllar, Rosa L. Fundación para la Conservación del Bosque Chiquitano; BoliviaFil: Decarre, Julieta. Instituto Nacional de Tecnología Agropecuaria (INTA). Instituto de Recursos Biológicos; ArgentinaFil: Gallegos, Marcelo. Provincia de Salta. Secretaría de Ambiente; ArgentinaFil: Lizárraga, Leónidas. Administración De Parques Nacionales. Dirección Regional Noroeste. Salta; Argentina.Fil: Maffei, Leonardo. Biósfera Consultores Ambientales, Lima, Perú.Fil: Neris, Nora N. Secretaria del Ambiente; ParaguayFil: Quiroga, Verónica. Universidad Nacional de Córdoba. Inst. de Diversidad y Ecología Animal (IDEA – CONICET), Centro de Zoología Aplicada; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Saldivar, Silvia. ITAIPU Binacional. Dirección de Coordinación. División de Áreas Protegidas; ParaguayFil: Tamburini, Daniela Maria. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas, Físicas y Naturales. Centro de Ecología y Recursos Naturales Renovables; Argentin

Resistência a Septoria lycopersici em espécies de Solanum (Secção Lycopersicon) e em progênies de S. lycopersicum × S. peruvianum

Septoria leaf spot (Septoria lycopersici) is one of the major fungal diseases of tomatoes (Solanum lycopersicum) in tropical and subtropical regions with humid climates and/or in areas cultivated under sprinkler irrigation systems. Sources of resistance have been found in accessions of Solanum (section Lycopersicon) species. However, many of the described sources are not effective under Brazilian conditions. The objective of this work was to evaluate wild and cultivated Solanum (section Lycopersicon) germplasm to S. lycopersici isolates. A collection of 124 accessions was initially evaluated under greenhouse conditions. Ten accessions were highly resistance (HR), whereas 33 were classified as having a resistant (R) response to S. lycopersici isolates. Field evaluation was also conducted with a sub-set of accessions identified as either HR or R in the greenhouse experiment. This field evaluation confirmed greenhouse tests and indicated the presence of some potential sources of rate-reducing resistance. One highly resistant and eight resistant S. habrochaites accessions were identified as being resistant under both conditions, confirming that this wild species is one of the most promising sources of resistance to S. lycopersici. Five new sources with high levels of resistance were found in S. peruvianum accessions (PI-306811, CNPH-1036, LA-1910, LA-1984 and LA-2744). One accession derived from an interspecific cross between S. lycopersicum and S. peruvianum was also found to be highly resistant and might be useful to introgress resistance factors from this wild species into cultivated tomato germplasm. However, additional breeding efforts will be necessary to introgress into the cultivated tomato the resistance factors identified in other S. peruvianum accessions due to the presence of natural crossing barriers between the two species.A mancha-de-septória (Septoria lycopersici) é importante doença fúngica do tomateiro (Solanum lycopersicum) em áreas tropicais e subtropicais com alta umidade ou quando esta hortaliça é cultivada sob irrigação por aspersão. Fontes de resistência têm sido encontradas em germoplasma de Solanum (secção Lycopersicon). No entanto, muitas das fontes descritas não funcionam nas condições brasileiras. Avaliou-se uma coleção de germoplasma de tomate cultivado e selvagem (Solanum secção Lycopersicon) visando identificar novas fontes de elevada resistência. Uma coleção de 124 acessos foi inicialmente avaliada sob condições de casa de vegetação. Somente dez acessos foram classificados como altamente resistentes e 33 foram classificados como resistentes. Um ensaio de campo foi também conduzido com um subconjunto de acessos promissores identificados no primeiro experimento. Foi confirmada a resposta da maioria dos acessos avaliados em casa de vegetação e indicou a presença de fontes de resistência capazes de reduzir a taxa de progresso da doença. Um acesso de S. habrochaites com elevada resistência e oito acessos resistentes foram identificados, confirmando que esta espécie representa uma das mais promissoras fontes de genes de resistência a S. lycopersici. Cinco novas fontes com elevados níveis de resistência foram identificadas em acessos da espécie S. peruvianum (PI-306811, CNPH-1036, LA-1910, LA-1984 e LA-2744). Um acesso, derivado de cruzamento interespecífico entre S. lycopersicum e S. peruvianum também mostrou-se altamente resistente e poderá ser útil na introgressão deste(s) gene(s) em germoplasma de tomateiro cultivado. No entanto, esforços adicionais de melhoramento serão necessários para transferir para o tomateiro cultivado os fatores de resistência identificados em outros acessos de S. peruvianum, uma vez que existem barreiras naturais de cruzamentos entre estas duas espécies

The Science of Sungrazers, Sunskirters, and Other Near-Sun Comets

This review addresses our current understanding of comets that venture close to the Sun, and are hence exposed to much more extreme conditions than comets that are typically studied from Earth. The extreme solar heating and plasma environments that these objects encounter change many aspects of their behaviour, thus yielding valuable information on both the comets themselves that complements other data we have on primitive solar system bodies, as well as on the near-solar environment which they traverse. We propose clear definitions for these comets: We use the term near-Sun comets to encompass all objects that pass sunward of the perihelion distance of planet Mercury (0.307 AU). Sunskirters are defined as objects that pass within 33 solar radii of the Sun’s centre, equal to half of Mercury’s perihelion distance, and the commonly-used phrase sungrazers to be objects that reach perihelion within 3.45 solar radii, i.e. the fluid Roche limit. Finally, comets with orbits that intersect the solar photosphere are termed sundivers. We summarize past studies of these objects, as well as the instruments and facilities used to study them, including space-based platforms that have led to a recent revolution in the quantity and quality of relevant observations. Relevant comet populations are described, including the Kreutz, Marsden, Kracht, and Meyer groups, near-Sun asteroids, and a brief discussion of their origins. The importance of light curves and the clues they provide on cometary composition are emphasized, together with what information has been gleaned about nucleus parameters, including the sizes and masses of objects and their families, and their tensile strengths. The physical processes occurring at these objects are considered in some detail, including the disruption of nuclei, sublimation, and ionisation, and we consider the mass, momentum, and energy loss of comets in the corona and those that venture to lower altitudes. The different components of comae and tails are described, including dust, neutral and ionised gases, their chemical reactions, and their contributions to the near-Sun environment. Comet-solar wind interactions are discussed, including the use of comets as probes of solar wind and coronal conditions in their vicinities. We address the relevance of work on comets near the Sun to similar objects orbiting other stars, and conclude with a discussion of future directions for the field and the planned ground- and space-based facilities that will allow us to address those science topics

Measurement of Atmospheric Neutrino Oscillations with the ANTARES Neutrino Telescope

The data taken with the ANTARES neutrino telescope from 2007 to 2010, a total live time of 863 days, are used to measure the oscillation parameters of atmospheric neutrinos. Muon tracks are reconstructed with energies as low as 20 GeV. Neutrino oscillations will cause a suppression of vertical upgoing muon neutrinos of such energies crossing the Earth. The parameters determining the oscillation of atmospheric neutrinos are extracted by fitting the event rate as a function of the ratio of the estimated neutrino energy and reconstructed flight path through the Earth. Measurement contours of the oscillation parameters in a two-flavour approximation are derived. Assuming maximum mixing, a mass difference of $\Delta m_{32}^2=(3.1\pm 0.9)\cdot 10^{-3}$ eV$^2$ is obtained, in good agreement with the world average value.Comment: 9 pages, 5 figure

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

For a decade, The Cancer Genome Atlas (TCGA) program collected clinicopathologic annotation data along with multi-platform molecular profiles of more than 11,000 human tumors across 33 different cancer types. TCGA clinical data contain key features representing the democratized nature of the data collection process. To ensure proper use of this large clinical dataset associated with genomic features, we developed a standardized dataset named the TCGA Pan-Cancer Clinical Data Resource (TCGA-CDR), which includes four major clinical outcome endpoints. In addition to detailing major challenges and statistical limitations encountered during the effort of integrating the acquired clinical data, we present a summary that includes endpoint usage recommendations for each cancer type. These TCGA-CDR findings appear to be consistent with cancer genomics studies independent of the TCGA effort and provide opportunities for investigating cancer biology using clinical correlates at an unprecedented scale. Analysis of clinicopathologic annotations for over 11,000 cancer patients in the TCGA program leads to the generation of TCGA Clinical Data Resource, which provides recommendations of clinical outcome endpoint usage for 33 cancer types

Search for direct production of charginos and neutralinos in events with three leptons and missing transverse momentum in √s = 7 TeV pp collisions with the ATLAS detector

A search for the direct production of charginos and neutralinos in final states with three electrons or muons and missing transverse momentum is presented. The analysis is based on 4.7 fb−1 of proton–proton collision data delivered by the Large Hadron Collider and recorded with the ATLAS detector. Observations are consistent with Standard Model expectations in three signal regions that are either depleted or enriched in Z-boson decays. Upper limits at 95% confidence level are set in R-parity conserving phenomenological minimal supersymmetric models and in simplified models, significantly extending previous results

Search for displaced vertices arising from decays of new heavy particles in 7 TeV pp collisions at ATLAS

We present the results of a search for new, heavy particles that decay at a significant distance from their production point into a final state containing charged hadrons in association with a high-momentum muon. The search is conducted in a pp-collision data sample with a center-of-mass energy of 7 TeV and an integrated luminosity of 33 pb^-1 collected in 2010 by the ATLAS detector operating at the Large Hadron Collider. Production of such particles is expected in various scenarios of physics beyond the standard model. We observe no signal and place limits on the production cross-section of supersymmetric particles in an R-parity-violating scenario as a function of the neutralino lifetime. Limits are presented for different squark and neutralino masses, enabling extension of the limits to a variety of other models.Comment: 8 pages plus author list (20 pages total), 8 figures, 1 table, final version to appear in Physics Letters

Jet size dependence of single jet suppression in lead-lead collisions at sqrt(s(NN)) = 2.76 TeV with the ATLAS detector at the LHC

Measurements of inclusive jet suppression in heavy ion collisions at the LHC provide direct sensitivity to the physics of jet quenching. In a sample of lead-lead collisions at sqrt(s) = 2.76 TeV corresponding to an integrated luminosity of approximately 7 inverse microbarns, ATLAS has measured jets with a calorimeter over the pseudorapidity interval |eta| < 2.1 and over the transverse momentum range 38 < pT < 210 GeV. Jets were reconstructed using the anti-kt algorithm with values for the distance parameter that determines the nominal jet radius of R = 0.2, 0.3, 0.4 and 0.5. The centrality dependence of the jet yield is characterized by the jet "central-to-peripheral ratio," Rcp. Jet production is found to be suppressed by approximately a factor of two in the 10% most central collisions relative to peripheral collisions. Rcp varies smoothly with centrality as characterized by the number of participating nucleons. The observed suppression is only weakly dependent on jet radius and transverse momentum. These results provide the first direct measurement of inclusive jet suppression in heavy ion collisions and complement previous measurements of dijet transverse energy imbalance at the LHC.Comment: 15 pages plus author list (30 pages total), 8 figures, 2 tables, submitted to Physics Letters B. All figures including auxiliary figures are available at http://atlas.web.cern.ch/Atlas/GROUPS/PHYSICS/PAPERS/HION-2011-02

Measurement of the polarisation of W bosons produced with large transverse momentum in pp collisions at sqrt(s) = 7 TeV with the ATLAS experiment

This paper describes an analysis of the angular distribution of W->enu and W->munu decays, using data from pp collisions at sqrt(s) = 7 TeV recorded with the ATLAS detector at the LHC in 2010, corresponding to an integrated luminosity of about 35 pb^-1. Using the decay lepton transverse momentum and the missing transverse energy, the W decay angular distribution projected onto the transverse plane is obtained and analysed in terms of helicity fractions f0, fL and fR over two ranges of W transverse momentum (ptw): 35 < ptw < 50 GeV and ptw > 50 GeV. Good agreement is found with theoretical predictions. For ptw > 50 GeV, the values of f0 and fL-fR, averaged over charge and lepton flavour, are measured to be : f0 = 0.127 +/- 0.030 +/- 0.108 and fL-fR = 0.252 +/- 0.017 +/- 0.030, where the first uncertainties are statistical, and the second include all systematic effects.Comment: 19 pages plus author list (34 pages total), 9 figures, 11 tables, revised author list, matches European Journal of Physics C versio