118 research outputs found

    From Adversarial Arms Race to Model-centric Evaluation: Motivating a Unified Automatic Robustness Evaluation Framework

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    Textual adversarial attacks can discover models' weaknesses by adding semantic-preserved but misleading perturbations to the inputs. The long-lasting adversarial attack-and-defense arms race in Natural Language Processing (NLP) is algorithm-centric, providing valuable techniques for automatic robustness evaluation. However, the existing practice of robustness evaluation may exhibit issues of incomprehensive evaluation, impractical evaluation protocol, and invalid adversarial samples. In this paper, we aim to set up a unified automatic robustness evaluation framework, shifting towards model-centric evaluation to further exploit the advantages of adversarial attacks. To address the above challenges, we first determine robustness evaluation dimensions based on model capabilities and specify the reasonable algorithm to generate adversarial samples for each dimension. Then we establish the evaluation protocol, including evaluation settings and metrics, under realistic demands. Finally, we use the perturbation degree of adversarial samples to control the sample validity. We implement a toolkit RobTest that realizes our automatic robustness evaluation framework. In our experiments, we conduct a robustness evaluation of RoBERTa models to demonstrate the effectiveness of our evaluation framework, and further show the rationality of each component in the framework. The code will be made public at \url{https://github.com/thunlp/RobTest}.Comment: Accepted to Findings of ACL 202

    Regulation of cell survival by sphingosine-1-phosphate receptor S1P1 via reciprocal ERK-dependent suppression of bim and PI-3-kinase/protein kinase C-mediated upregulation of Mcl-1

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    Although the ability of bioactive lipid sphingosine-1-phosphate (S1P) to positively regulate anti-apoptotic/pro-survival responses by binding to S1P1 is well known, the molecular mechanisms remain unclear. Here we demonstrate that expression of S1P1 renders CCL39 lung fibroblasts resistant to apoptosis following growth factor withdrawal. Resistance to apoptosis was associated with attenuated accumulation of pro-apoptotic BH3-only protein Bim. However, although blockade of extracellular signal-regulated kinase (ERK) activation could reverse S1P1-mediated suppression of Bim accumulation, inhibition of caspase-3 cleavage was unaffected. Instead S1P1-mediated inhibition of caspase-3 cleavage was reversed by inhibition of phosphatidylinositol-3-kinase (PI3K) and protein kinase C (PKC), which had no effect on S1P1 regulation of Bim. However, S1P1 suppression of caspase-3 was associated with increased expression of anti-apoptotic protein Mcl-1, the expression of which was also reduced by inhibition of PI3K and PKC. A role for the induction of Mcl-1 in regulating endogenous S1P receptor-dependent pro-survival responses in human umbilical vein endothelial cells was confirmed using S1P receptor agonist FTY720-phosphate (FTY720P). FTY720P induced a transient accumulation of Mcl-1 that was associated with a delayed onset of caspase-3 cleavage following growth factor withdrawal, whereas Mcl-1 knockdown was sufficient to enhance caspase-3 cleavage even in the presence of FTY720P. Consistent with a pro-survival role of S1P1 in disease, analysis of tissue microarrays from ER+ breast cancer patients revealed a significant correlation between S1P1 expression and tumour cell survival. In these tumours, S1P1 expression and cancer cell survival were correlated with increased activation of ERK, but not the PI3K/PKB pathway. In summary, pro-survival/anti-apoptotic signalling from S1P1 is intimately linked to its ability to promote the accumulation of pro-survival protein Mcl-1 and downregulation of pro-apoptotic BH3-only protein Bim via distinct signalling pathways. However, the functional importance of each pathway is dependent on the specific cellular context

    The Ubiquitin Peptidase UCHL1 Induces G0/G1 Cell Cycle Arrest and Apoptosis Through Stabilizing p53 and Is Frequently Silenced in Breast Cancer

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    Background: Breast cancer (BrCa) is a complex disease driven by aberrant gene alterations and environmental factors. Recent studies reveal that abnormal epigenetic gene regulation also plays an important role in its pathogenesis. Ubiquitin carboxyl- terminal esterase L1 (UCHL1) is a tumor suppressor silenced by promoter methylation in multiple cancers, but its role and alterations in breast tumorigenesis remain unclear. Methodology/Principal Findings: We found that UCHL1 was frequently downregulated or silenced in breast cancer cell lines and tumor tissues, but readily expressed in normal breast tissues and mammary epithelial cells. Promoter methylation of UCHL1 was detected in 9 of 10 breast cancer cell lines (90%) and 53 of 66 (80%) primary tumors, but rarely in normal breast tissues, which was statistically correlated with advanced clinical stage and progesterone receptor status. Pharmacologic demethylation reactivated UCHL1 expression along with concomitant promoter demethylation. Ectopic expression of UCHL1 significantly suppressed the colony formation and proliferation of breast tumor cells, through inducing G0/G1 cell cycle arrest and apoptosis. Subcellular localization study showed that UCHL1 increased cytoplasmic abundance of p53. We further found that UCHL1 induced p53 accumulation and reduced MDM2 protein level, and subsequently upregulated the expression of p21, as well as cleavage of caspase3 and PARP, but not in catalytic mutant UCHL1 C90Sexpressed cells

    Human matrix metalloproteinases: An ubiquitarian class of enzymes involved in several pathological processes

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    Human matrix metalloproteinases (MMPs) belong to the M10 family of the MA clan of endopeptidases. They are ubiquitarian enzymes, structurally characterized by an active site where a Zn(2+) atom, coordinated by three histidines, plays the catalytic role, assisted by a glutamic acid as a general base. Various MMPs display different domain composition, which is very important for macromolecular substrates recognition. Substrate specificity is very different among MMPs, being often associated to their cellular compartmentalization and/or cellular type where they are expressed. An extensive review of the different MMPs structural and functional features is integrated with their pathological role in several types of diseases, spanning from cancer to cardiovascular diseases and to neurodegeneration. It emerges a very complex and crucial role played by these enzymes in many physiological and pathological processes

    Continuous Visible Query for Three-Dimensional Objects in Spatial Databases

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    Present research of visible query focuses on points and segments in two-dimensional space, while disfigurements occur during processing of visible query in three-dimensional space. In this paper, Continuous Visible Range Query Based on Control Point (CVRQ-CP) is proposed to solve the visible query in a 3D spatial database. Firstly, the horizontal angle (HA) and Vertical Projection Angle (VPA) for 3D objects in a spatial database were used in the visibility testing method. The HA and VPA in the processing of the continuous visible query created visibility changes, defining and confirming the control point. Finally, the algorithm of Continuous Visible Range Query Based on Control Point (CVRQ-CP) was proposed. Verified by experiments, the CVRQ-CP algorithm correctly deals with the visible query of 3D spatial objects. The CVRQ-CP algorithm has better superior accuracy over present visible queries in 3D spatial databases
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