Typification of names of Clusiaceae based on material collected by August Weberbauer in Peru

August Weberbauer was a German botanist who worked for most of his life in Peru. Many species have been described based on specimens collected by him, which were mainly deposited in the Berlin herbarium (B). After the bombing of the Berlin herbarium during World War II, it was assumed that most of these types had been destroyed, duplicates rarely existed and neotypes had to be designated. However, during visits to Peruvian herbaria we rediscovered some overlooked duplicates of specimens of Clusiaceae. In the present paper, we designate lectotypes of ten names based on these Weberbauer collections and report additional duplicates found in the herbarium G. Some former incorrect typifications are corrected, and the problem of destroyed types in herbarium B, often known mainly from photos made by J. F. Macbride, is briefly discussed.492193196CONSELHO NACIONAL DE DESENVOLVIMENTO CIENTÍFICO E TECNOLÓGICO - CNPQFUNDAÇÃO DE AMPARO À PESQUISA DO ESTADO DE SÃO PAULO - FAPESP311744/2017-62012/51781-0; 2012/15542-

Clusia nitida, a new species of clusia (Clusiaceae) from the Brazilian Amazon

In this paper we describe and illustrate Clusia nitida, a new species from the Amazon with resin-producing flowers, similar to C. microstemon and C. myriandra. © 2013 Magnolia Press

Phylogeny of the Clusioid Clade (Malpighiales): Evidence from the Plastid and Mitochonrial Genomes

• Premise of the study : The clusioid clade includes five families (i.e., Bonnetiaceae, Calophyllaceae, Clusiaceae s.s., Hypericaceae, and Podostemaceae) represented by 94 genera and ~1900 species. Species in this clade form a conspicuous element of tropical forests worldwide and are important in horticulture, timber production, and pharmacology. We conducted a taxon-rich multigene phylogenetic analysis of the clusioids to clarify phylogenetic relationships in this clade. • Methods : We analyzed plastid ( matK , ndhF , and rbcL ) and mitochondrial ( matR ) nucleotide sequence data using parsimony, maximum likelihood, and Bayesian inference. Our combined data set included 194 species representing all major clusioid subclades, plus numerous species spanning the taxonomic, morphological, and biogeographic breadth of the clusioid clade. • Key results : Our results indicate that Tovomita (Clusiaceae s.s.), Harungana and Hypericum (Hypericaceae), and Ledermanniella s.s. and Zeylanidium (Podostemaceae) are not monophyletic. In addition, we place four genera that have not been included in any previous molecular study: Ceratolacis , Diamantina , and Griffi thella (Podostemaceae), and Santomasia (Hypericaceae). Finally, our results indicate that Lianthus , Santomasia , Thornea , and Triadenum can be safely merged into Hypericum (Hypericaceae). • Conclusions : We present the first well-resolved, taxon-rich phylogeny of the clusioid clade. Taxon sampling and resolution within the clade are greatly improved compared to previous studies and provide a strong basis for improving the classification of the group. In addition, our phylogeny will form the foundation for our future work investigating the biogeography of tropical angiosperms that exhibit Gondwanan distributions. DOI:10.3732/ajb.100035

Aquatic and marsh plants from the Recôncavo basin of Bahia state, Brazil: checklist and life forms

Aquatic and marsh plants are those that have the capacity to withstand a continuous or periodic submersion in water, at least of their roots. Such plants are thus able to occupy environments that are at least periodically waterlogged. The knowledge about this plant group is still rather incomplete for various parts of Brazil including the Northeast. The present study was conducted in Bahia state, through collections in 20 municipalities within the Recôncavo basin between 2009 and 2015. All species were classified across six life forms. We report 316 species in 206 genera and 71 families, including 11 fern species, with helophytes and emergent being the commonest ones. Collection efforts in aquatic environments in the Recôncavo region added nine families of angiosperms to those already reported in previous studies of such plants in Northeastern Brazil. The region presents a wide variety of aquatic and marsh plants and the respective habitats play an important role in the conservation/maintenance of biodiversity and especially of water bodies in Eastern Bahia

Impact of Borderline Resectability in Pancreatic Head Cancer on Patient Survival: Biology Matters According to the New International Consensus Criteria

Background: International consensus criteria (ICC) have redefined borderline resectability for pancreatic ductal adenocarcinoma (PDAC) according to three dimensions: anatomical (BR-A), biological (BR-B), and conditional (BR-C). The present definition acknowledges that resectability is not just about the anatomic relationship between the tumour and vessels but that biological and conditional dimensions also are important. Methods: Patients’ tumours were retrospectively defined b

An interactive key (Lucid) for the identifying of the genera of seed plants from the Ducke Reserve, Manaus, AM, Brazil

The identification of Amazonian plants is still difficult for many reasons, one being the lack of collections over large areas of the region. As a consequence of the poor knowledge on the Amazonian flora, many taxonomic publications (revisions and floristic treatments) become out of date within a few years. In this context, the on-line publication of taxonomic treatises has been suggested, since it allows constant data updates; and this type of publication should therefore be more valued by the scientific community. An excellent field guide for the Ducke Reserve (Manaus, central Amazonian Brazil) was published, based exclusively on vegetative characters. However, the presence of reproductive structures in the collected material does not facilitate identification with this type of field guide. Furthermore, as in any printed key, the text cannot be updated, except through a new edition. As an example of a way to facilitate the identification of Amazonian plants, an interactive, multiple-entry key to the seed plant genera that occur in the Ducke Reserve was created using the program Lucid 3.5. The key includes vegetative and reproductive characters and many illustrations, and is available on-line. We discuss here the peculiarities and advantages of this type of electronic publication

Suprageneric nomenclature in the Caryophyllaceae

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/149755/1/tax04760.pd

Identification of regulatory variants associated with genetic susceptibility to meningococcal disease.

Non-coding genetic variants play an important role in driving susceptibility to complex diseases but their characterization remains challenging. Here, we employed a novel approach to interrogate the genetic risk of such polymorphisms in a more systematic way by targeting specific regulatory regions relevant for the phenotype studied. We applied this method to meningococcal disease susceptibility, using the DNA binding pattern of RELA - a NF-kB subunit, master regulator of the response to infection - under bacterial stimuli in nasopharyngeal epithelial cells. We designed a custom panel to cover these RELA binding sites and used it for targeted sequencing in cases and controls. Variant calling and association analysis were performed followed by validation of candidate polymorphisms by genotyping in three independent cohorts. We identified two new polymorphisms, rs4823231 and rs11913168, showing signs of association with meningococcal disease susceptibility. In addition, using our genomic data as well as publicly available resources, we found evidences for these SNPs to have potential regulatory effects on ATXN10 and LIF genes respectively. The variants and related candidate genes are relevant for infectious diseases and may have important contribution for meningococcal disease pathology. Finally, we described a novel genetic association approach that could be applied to other phenotypes

Search for dark matter produced in association with bottom or top quarks in √s = 13 TeV pp collisions with the ATLAS detector

A search for weakly interacting massive particle dark matter produced in association with bottom or top quarks is presented. Final states containing third-generation quarks and miss- ing transverse momentum are considered. The analysis uses 36.1 fb−1 of proton–proton collision data recorded by the ATLAS experiment at √s = 13 TeV in 2015 and 2016. No significant excess of events above the estimated backgrounds is observed. The results are in- terpreted in the framework of simplified models of spin-0 dark-matter mediators. For colour- neutral spin-0 mediators produced in association with top quarks and decaying into a pair of dark-matter particles, mediator masses below 50 GeV are excluded assuming a dark-matter candidate mass of 1 GeV and unitary couplings. For scalar and pseudoscalar mediators produced in association with bottom quarks, the search sets limits on the production cross- section of 300 times the predicted rate for mediators with masses between 10 and 50 GeV and assuming a dark-matter mass of 1 GeV and unitary coupling. Constraints on colour- charged scalar simplified models are also presented. Assuming a dark-matter particle mass of 35 GeV, mediator particles with mass below 1.1 TeV are excluded for couplings yielding a dark-matter relic density consistent with measurements