76 research outputs found
Dipolar condensates confined in a toroidal trap: ground state and vortices
We study a Bose-Einstein condensate of 52Cr atoms confined in a toroidal trap
with a variable strength of s-wave contact interactions. We analyze the effects
of the anisotropic nature of the dipolar interaction by considering the
magnetization axis to be perpendicular to the trap symmetry axis. In the
absence of a central repulsive barrier, when the trap is purely harmonic, the
effect of reducing the scattering length is a tuning of the geometry of the
system: from a pancake-shaped condensate when it is large, to a cigar-shaped
condensate for small scattering lengths. For a condensate in a toroidal trap,
the interaction in combination with the central repulsive Gaussian barrier
produces an azimuthal dependence of the particle density for a fixed radial
distance. We find that along the magnetization direction the density decreases
as the scattering length is reduced but presents two symmetric density peaks in
the perpendicular axis. For even lower values of the scattering length we
observe that the system undergoes a dipolar-induced symmetry breaking
phenomenon. The whole density becomes concentrated in one of the peaks,
resembling an origin-displaced cigar-shaped condensate. In this context we also
analyze stationary vortex states and their associated velocity field, finding
that this latter also shows a strong azimuthal dependence for small scattering
lengths. The expectation value of the angular momentum along the z direction
provides a qualitative measure of the difference between the velocity in the
different density peaks.Comment: 9 pages, 12 figure
A dipolar self-induced bosonic Josephson junction
We propose a new scheme for observing Josephson oscillations and macroscopic
quantum self-trapping phenomena in a toroidally confined Bose-Einstein
condensate: a dipolar self-induced Josephson junction. Polarizing the atoms
perpendicularly to the trap symmetry axis, an effective ring-shaped,
double-well potential is achieved which is induced by the dipolar interaction.
By numerically solving the three-dimensional time-dependent Gross-Pitaevskii
equation we show that coherent tunneling phenomena such as Josephson
oscillations and quantum self-trapping can take place. The dynamics in the
self-induced junction can be qualitatively described by a two-mode model taking
into account both s-wave and dipolar interactions.Comment: Major changes. Accepted for publication in EP
Vortices in dipolar condensates with dominant dipolar interactions
We present full three-dimensional numerical calculations of single vortex
states in rotating dipolar condensates. We consider a Bose-Einstein condensate
of 52Cr atoms with dipole-dipole and s-wave contact interactions confined in an
axially symmetric harmonic trap. We obtain the vortex states by numerically
solving the Gross-Pitaevskii equation in the rotating frame with no further
approximations. We investigate the properties of a single vortex and calculate
the critical angular velocity for different values of the s-wave scattering
length. We show that, whereas the standard variational approach breaks down in
the limit of pure dipolar interactions, exact solutions of the Gross-Pitaevskii
equation can be obtained for values of the s-wave scattering length down to
zero. The energy barrier for the nucleation of a vortex is calculated as a
function of the vortex displacement from the rotation axis for different values
of the angular velocity of the rotating trap.Comment: 10 pages with 9 figure
Phase-slippage and self-trapping in a self-induced bosonic Josephson junction
A dipolar condensate confined in a toroidal trap constitutes a self-induced
Josepshon junction when the dipoles are oriented perpendicularly to the trap
symmetry axis and the s-wave scattering length is small enough. The ring-shaped
double-well potential coming from the anisotropic character of the mean-field
dipolar interaction is robust enough to sustain self-trapping dynamics, which
takes place when the initial population imbalance between the two wells is
large. We show that in this system the self-trapping regime is directly related
to a vortex-induced phase-slip dynamics. A vortex and antivortex are
spontaneously nucleated in the low density regions, before a minimum of the
population imbalance is reached, and then cross the toroidal section in
opposite directions through the junctions.This vortex dynamics yields a phase
slip between the two weakly linked condensates causing an inversion of the
particle flux.Comment: 4 page
Approaches in biotechnological applications of natural polymers
Natural polymers, such as gums and mucilage, are biocompatible, cheap, easily available and non-toxic materials of native origin. These polymers are increasingly preferred over synthetic materials for industrial applications due to their intrinsic properties, as well as they are considered alternative sources of raw materials since they present characteristics of sustainability, biodegradability and biosafety. As definition, gums and mucilages are polysaccharides or complex carbohydrates consisting of one or more monosaccharides or their derivatives linked in bewildering variety of linkages and structures. Natural gums are considered polysaccharides naturally occurring in varieties of plant seeds and exudates, tree or shrub exudates, seaweed extracts, fungi, bacteria, and animal sources. Water-soluble gums, also known as hydrocolloids, are considered exudates and are pathological products; therefore, they do not form a part of cell wall. On the other hand, mucilages are part of cell and physiological products. It is important to highlight that gums represent the largest amounts of polymer materials derived from plants. Gums have enormously large and broad applications in both food and non-food industries, being commonly used as thickening, binding, emulsifying, suspending, stabilizing agents and matrices for drug release in pharmaceutical and cosmetic industries. In the food industry, their gelling properties and the ability to mold edible films and coatings are extensively studied. The use of gums depends on the intrinsic properties that they provide, often at costs below those of synthetic polymers. For upgrading the value of gums, they are being processed into various forms, including the most recent nanomaterials, for various biotechnological applications. Thus, the main natural polymers including galactomannans, cellulose, chitin, agar, carrageenan, alginate, cashew gum, pectin and starch, in addition to the current researches about them are reviewed in this article.. }To the Conselho Nacional de Desenvolvimento Cientfíico e Tecnológico (CNPq) for fellowships (LCBBC and MGCC) and the Coordenação de Aperfeiçoamento de Pessoal de Nvíel Superior (CAPES) (PBSA). This study was supported by the Portuguese Foundation for Science and Technology (FCT) under the scope of the strategic funding of UID/BIO/04469/2013 unit, the Project RECI/BBB-EBI/0179/2012 (FCOMP-01-0124-FEDER-027462) and COMPETE 2020 (POCI-01-0145-FEDER-006684) (JAT)
Multiple Sclerosis Risk Variant HLA-DRB1*1501 Associates with High Expression of DRB1 Gene in Different Human Populations
The human leukocyte antigen (HLA) DRB1*1501 has been consistently associated with multiple sclerosis (MS) in nearly all populations tested. This points to a specific antigen presentation as the pathogenic mechanism though this does not fully explain the disease association. The identification of expression quantitative trait loci (eQTL) for genes in the HLA locus poses the question of the role of gene expression in MS susceptibility. We analyzed the eQTLs in the HLA region with respect to MS-associated HLA-variants obtained from genome-wide association studies (GWAS). We found that the Tag of DRB1*1501, rs3135388 A allele, correlated with high expression of DRB1, DRB5 and DQB1 genes in a Caucasian population. In quantitative terms, the MS-risk AA genotype carriers of rs3135388 were associated with 15.7-, 5.2- and 8.3-fold higher expression of DQB1, DRB5 and DRB1, respectively, than the non-risk GG carriers. The haplotype analysis of expression-associated variants in a Spanish MS cohort revealed that high expression of DRB1 and DQB1 alone did not contribute to the disease. However, in Caucasian, Asian and African American populations, the DRB1*1501 allele was always highly expressed. In other immune related diseases such as type 1 diabetes, inflammatory bowel disease, ulcerative colitis, asthma and IgA deficiency, the best GWAS-associated HLA SNPs were also eQTLs for different HLA Class II genes. Our data suggest that the DR/DQ expression levels, together with specific structural properties of alleles, seem to be the causal effect in MS and in other immunopathologies rather than specific antigen presentation alone
A hierarchical and modular approach to the discovery of robust associations in genome-wide association studies from pooled DNA samples
[Background]
One of the challenges of the analysis of pooling-based genome wide association studies is to identify authentic associations among potentially thousands of false positive associations.
[Results]
We present a hierarchical and modular approach to the analysis of genome wide genotype data that incorporates quality control, linkage disequilibrium, physical distance and gene ontology to identify authentic associations among those found by statistical association tests. The method is developed for the allelic association analysis of pooled DNA samples, but it can be easily generalized to the analysis of individually genotyped samples. We evaluate the approach using data sets from diverse genome wide association studies including fetal hemoglobin levels in sickle cell anemia and a sample of centenarians and show that the approach is highly reproducible and allows for discovery at different levels of synthesis.
[Conclusion]
Results from the integration of Bayesian tests and other machine learning techniques with linkage disequilibrium data suggest that we do not need to use too stringent thresholds to reduce the number of false positive associations. This method yields increased power even with relatively small samples. In fact, our evaluation shows that the method can reach almost 70% sensitivity with samples of only 100 subjects.Supported by NHLBI grants R21 HL080463 (PS); R01 HL68970 (MHS); K-24, AG025727 (TP); K23 AG026754 (D.T.)
Anti-tumour necrosis factor discontinuation in inflammatory bowel disease patients in remission: study protocol of a prospective, multicentre, randomized clinical trial
Background:
Patients with inflammatory bowel disease who achieve remission with anti-tumour necrosis factor (anti-TNF) drugs may have treatment withdrawn due to safety concerns and cost considerations, but there is a lack of prospective, controlled data investigating this strategy. The primary study aim is to compare the rates of clinical remission at 1?year in patients who discontinue anti-TNF treatment versus those who continue treatment.
Methods:
This is an ongoing, prospective, double-blind, multicentre, randomized, placebo-controlled study in patients with Crohn?s disease or ulcerative colitis who have achieved clinical remission for ?6?months with an anti-TNF treatment and an immunosuppressant. Patients are being randomized 1:1 to discontinue anti-TNF therapy or continue therapy. Randomization stratifies patients by the type of inflammatory bowel disease and drug (infliximab versus adalimumab) at study inclusion. The primary endpoint of the study is sustained clinical remission at 1?year. Other endpoints include endoscopic and radiological activity, patient-reported outcomes (quality of life, work productivity), safety and predictive factors for relapse. The required sample size is 194 patients. In addition to the main analysis (discontinuation versus continuation), subanalyses will include stratification by type of inflammatory bowel disease, phenotype and previous treatment. Biological samples will be obtained to identify factors predictive of relapse after treatment withdrawal.
Results:
Enrolment began in 2016, and the study is expected to end in 2020.
Conclusions:
This study will contribute prospective, controlled data on outcomes and predictors of relapse in patients with inflammatory bowel disease after withdrawal of anti-TNF agents following achievement of clinical remission.
Clinical trial reference number:
EudraCT 2015-001410-1
Post-Franco Theatre
In the multiple realms and layers that comprise the contemporary Spanish theatrical landscape, “crisis” would seem to be the word that most often lingers in the air, as though it were a common mantra, ready to roll off the tongue of so many theatre professionals with such enormous ease, and even enthusiasm, that one is prompted to wonder whether it might indeed be a miracle that the contemporary technological revolution – coupled with perpetual quandaries concerning public and private funding for the arts – had not by now brought an end to the evolution of the oldest of live arts, or, at the very least, an end to drama as we know it
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