43 research outputs found

    Efficient recovery-based error estimation for the smoothed finite element method for smooth and singular linear elasticity

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    [EN] An error control technique aimed to assess the quality of smoothed finite element approximations is presented in this paper. Finite element techniques based on strain smoothing appeared in 2007 were shown to provide significant advantages compared to conventional finite element approximations. In particular, a widely cited strength of such methods is improved accuracy for the same computational cost. Yet, few attempts have been made to directly assess the quality of the results obtained during the simulation by evaluating an estimate of the discretization error. Here we propose a recovery type error estimator based on an enhanced recovery technique. The salient features of the recovery are: enforcement of local equilibrium and, for singular problems a ¿smooth + singular¿ decomposition of the recovered stress. We evaluate the proposed estimator on a number of test cases from linear elastic structural mechanics and obtain efficient error estimations whose effectivities, both at local and global levels, are improved compared to recovery procedures not implementing these features.Stephane Bordas would like to thank the partial financial support of the Royal Academy of Engineering and of the Leverhulme Trust for his Senior Research Fellowship Towards the next generation surgical simulators as well as the financial support for Octavio A. Gonzalez-Estrada and Stephane Bordas from the UK Engineering Physical Science Research Council (EPSRC) under grant EP/G042705/1 Increased Reliability for Industrially Relevant Automatic Crack Growth Simulation with the eXtended Finite Element Method. Stephane Bordas also thanks partial financial support of the European Research Council Starting Independent Research Grant (ERC Stg grant agreement No. 279578) and the FP7 Initial Training Network Funding under grant number 289361 "Integrating Numerical Simulation and Geometric Design Technology, INSIST". This work has been carried out within the framework of the research project DPI2010-20542 of the Ministerio de Ciencia e Innovacion (Spain). The financial support from Universitat Politecnica de Valencia, PROMETEO/2012/023 and Generalitat Valenciana are also acknowledged.González Estrada, OA.; Natarajan, S.; J.J. Ródenas; Nguyen-Xuan, H.; Bordas, S. (2013). Efficient recovery-based error estimation for the smoothed finite element method for smooth and singular linear elasticity. Computational Mechanics. 52(1):37-52. https://doi.org/10.1007/s00466-012-0795-6S3752521Liu GR, Dai KY, Nguyen TT (2006) A smoothed finite element method for mechanics problems. Comput Mech 39(6): 859–877. doi: 10.1007/s00466-006-0075-4Liu GR, Nguyen TT, Dai KY, Lam KY (2007) Theoretical aspects of the smoothed finite element method (SFEM). Int J Numer Methods Eng 71(8): 902–930Nguyen-Xuan H, Bordas SPA, Nguyen-Dang H (2008) Smooth finite element methods: convergence, accuracy and properties. Int J Numer Methods Eng 74(2): 175–208. doi: 10.1002/nmeBordas SPA, Natarajan S (2010) On the approximation in the smoothed finite element method (SFEM). Int J Numer Methods Eng 81(5): 660–670. doi: 10.1002/nmeZhang HH, Liu SJ, Li LX (2008) On the smoothed finite element method. Int J Numer Methods Eng 76(8): 1285–1295. doi: 10.1002/nme.2460Nguyen-Thoi T, Liu G, Lam K, Zhang G. (2009) A face-based smoothed finite element method (FS-FEM) for 3D linear and nonlinear solid mechanics using 4-node tetrahedral elements. Int J Numer Methods Eng 78: 324–353Liu G, Nguyen-Thoi T, Lam K (2009) An edge-based smoothed finite element method (ES-FEM) for static, free and forced vibration analyses of solids. J Sound Vib 320: 1100–1130Liu G, Nguyen-Thoi T, Nguyen-Xuan H, Lam K (2009) A node based smoothed finite element method (NS-FEM) for upper bound solution to solid mechanics problems. Comput Struct 87: 14–26Liu G. Smoothed Finite Element Methods. CRC Press, 2010Liu G, Nguyen-Xuan H, Nguyen-Thoi T (2010) A theoretical study on the smoothed FEM (SFEM) models: Properties, accuracy and convergence rates. Int J Numer Methods Biomed Eng 84: 1222–1256Nguyen T, Liu G, Dai K, Lam K (2007) smoothed finite element method. Tsinghua Sci Technol 12: 497–508Hung NX, Bordas S, Hung N (2009) Addressing volumetric locking and instabilities by selective integration in smoothed finite element. Commun Numer Methods Eng 25: 19–34Nguyen-Xuan H, Rabczuk T, Bordas S, Debongnie JF (2008) A smoothed finite element method for plate analysis. Comput Methods Appl Mech Eng 197: 1184–1203Nguyen NT, Rabczuk T, Nguyen-Xuan H, Bordas S (2008) A smoothed finite element method for shell analysis. Comput Methods Appl Mech Eng 198: 165–177Bordas SPA, Rabczuk T, Hung NX, Nguyen VP, Natarajan S, Bog T, óuan DM, Hiep NV (2010) Strain smoothing in FEM and XFEM. Comput Struct 88(23–24): 1419–1443. doi: 10.1016/j.compstruc.2008.07.006Bordas SP, Natarajan S, Kerfriden P, Augarde CE, Mahapatra DR, Rabczuk T, Pont SD (2011) On the performance of strain smoothing for óuadratic and enriched finite element approximations (XFEM/GFEM/PUFEM). Int J Numer Methods Biomed Eng 86: 637–666Liu G, Nguyen-Thoi T, Nguyen-Xuan H, Dai K, Lam K (2009) On the essence and the evaluation of the shape functions for the smoothed finite element method (SFEM). Int J Numer Methods Eng 77: 1863–1869. doi: 10.1002/nme.2587Strouboulis T, Zhang L, Wang D, Babuška I. (2006) A posteriori error estimation for generalized finite element methods. Comput Methods Appl Mech Eng 195(9–12): 852–879Bordas SPA, Duflot M (2007) Derivative recovery and a posteriori error estimate for extended finite elements. Comput Methods Appl Mech Eng 196(35–36): 3381–3399Xiao óZ, Karihaloo BL (2004) Statically admissible stress recovery using the moving least sóuares technique. In: Topping BHV, Soares CAM (eds) Progress in computational structures technology. Saxe-Coburg Publications, Stirling, pp 111–138Ródenas JJ, González-Estrada OA, Tarancón JE, Fuenmayor FJ (2008) A recovery-type error estimator for the extended finite element method based on singular + smooth stress field splitting. Int J Numer Methods Eng 76(4): 545–571. doi: 10.1002/nme.2313Panetier J, Ladevèze P, Chamoin L (2010) Strict and effective bounds in goal-oriented error estimation applied to fracture mechanics problems solved with XFEM. Int J Numer Methods Eng 81(6): 671–700Barros FB, Proenca SPB, de Barcellos CS (2004) On error estimator and p-adaptivity in the generalized finite element method. Int J Numer Methods Eng 60(14):2373–2398. doi: 10.1002/nme.1048Nguyen-Thoi T, Liu G, Nguyen-Xuan H, Nguyen-Tran C (2011) Adaptive analysis using the node-based smoothed finite element method (NS-FEM). Int J Numer Methods Biomed Eng 27(2): 198–218. doi: 10.1002/cnmGonzález-Estrada OA, Ródenas JJ, Bordas SPA, Duflot M, Kerfriden P, Giner E (2012) On the role of enrichment and statical admissibility of recovered fields in a-posteriori error estimation for enriched finite element methods. Eng Comput 29(8)Zienkiewicz OC, Zhu JZ (1987) A simple error estimator and adaptive procedure for practical engineering analysis. Int J Numer Methods Eng 24(2): 337–357Ródenas JJ, González-Estrada OA, Díez P, Fuenmayor FJ (2010) Accurate recovery-based upper error bounds for the extended finite element framework. Comput Methods Appl Mech Eng 199(37–40): 2607–2621Williams ML (1952) Stress singularities resulting from various boundary conditions in angular corners of plate in extension. J Appl Mech 19: 526–534Szabó BA, Babuška I (1991) Finite element analysis. Wiley, New YorkBarber JR. (2010) Elasticity. Series: solid mechanics and its application, 3rd edn. Springer, DordrechtChen JS, Wu CT, Yoon S, You Y (2001) A stabilized conforming nodal integration for Galerki mesh-free methods. Int J Numer Methods Eng 50: 435–466Yoo J, Moran B, Chen J (2004) Stabilized conforming nodal integration in the natural element method. Int J Numer Methods Eng 60: 861–890Zienkiewicz OC, Zhu JZ (1992) The superconvergent patch recovery and a posteriori error estimates. Part 1: The recovery technique. Int J Numer Methods Eng 33(7): 1331–1364Zienkiewicz OC, Zhu JZ (1992) The superconvergent patch recovery and a posteriori error estimates. Part 2: Error estimates and adaptivity. Int J Numer Methods Eng 33(7): 1365–1382Wiberg NE, Abdulwahab F (1993) Patch recovery based on superconvergent derivatives and eóuilibrium. Int J Numer Methods Eng 36(16): 2703–2724. doi: 10.1002/nme.1620361603Blacker T, Belytschko T (1994) Superconvergent patch recovery with eóuilibrium and conjoint interpolant enhancements. Int J Numer Methods Eng 37(3): 517–536Stein E, Ramm E, Rannacher R (2003) Error-controlled adaptive finite elements in solid mechanics. Wiley, ChichesterDuflot M, Bordas SPA (2008) A posteriori error estimation for extended finite elements by an extended global recovery. Int J Numer Methods Eng 76: 1123–1138. doi: 10.1002/nmeBordas SPA, Duflot M, Le P (2008) A simple error estimator for extended finite elements. Commun Numer Methods Eng 24(11): 961–971Ródenas JJ, Tur M, Fuenmayor FJ, Vercher A (2007) Improvement of the superconvergent patch recovery technique by the use of constraint eóuations: the SPR-C technique. Int J Numer Methods Eng 70(6): 705–727. doi: 10.1002/nme.1903Díez P, Ródenas JJ, Zienkiewicz OC (2007) Eóuilibrated patch recovery error estimates: simple and accurate upper bounds of the error. Int J Numer Methods Eng 69(10): 2075–2098. doi: 10.1002/nmeYau J, Wang S, Corten H (1980) A mixed-mode crack analysis of isotropic solids using conservation laws of elasticity. J Appl Mech 47(2): 335–341Ródenas JJ, González-Estrada OA, Fuenmayor FJ, Chinesta F (2010) Upper bounds of the error in X-FEM based on a moving least sóuares (MLS) recovery technique. In: Khalili N, Valliappan S, Li ó, Russell A (eds) 9th World congress on computational mechanics (WCCM9). 4th Asian Pacific Congress on computational methods (APCOM2010). Centre for Infrastructure Engineering and SafetyRódenas JJ, González-Estrada OA, Díez P, Fuenmayor FJ (2007) Upper bounds of the error in the extended finite element method by using an eóuilibrated-stress patch recovery technique. In: International conference on adaptive modeling and simulation (ADMOS 2007). International Center for Numerical Methods in Engineering (CIMNE), pp 210–213Menk A, Bordas S (2010) Numerically determined enrichment function for the extended finite element method and applications to bi-material anisotropic fracture and polycrystals. Int J Numer Methods Eng 83: 805–828Menk A, Bordas S (2011) Crack growth calculations in solder joints based on microstructural phenomena with X-FEM. Comput Mater Sci 3: 1145–1156Ródenas JJ (2001) Error de discretización en el cálculo de sensibilidades mediante el método de los elementos finitos. PhD Thesis, Universidad Politécnica de ValenciaAinsworth M, Oden JT (2000) A posteriori error estimation in finite element analysis. Wiley, Chicheste

    Enhanced error estimator based on a nearly equilibrated moving least squares recovery technique for FEM and XFEM

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    In this paper a new technique aimed to obtain accurate estimates of the error in energy norm using a moving least squares (MLS) recovery-based procedure is presented. We explore the capabilities of a recovery technique based on an enhanced MLS fitting, which directly provides continuous interpolated fields, to obtain estimates of the error in energy norm as an alternative to the superconvergent patch recovery (SPR). Boundary equilibrium is enforced using a nearest point approach that modifies the MLS functional. Lagrange multipliers are used to impose a nearly exact satisfaction of the internal equilibrium equation. The numerical results show the high accuracy of the proposed error estimator

    Chaste: an open source C++ library for computational physiology and biology

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    Chaste - Cancer, Heart And Soft Tissue Environment - is an open source C++ library for the computational simulation of mathematical models developed for physiology and biology. Code development has been driven by two initial applications: cardiac electrophysiology and cancer development. A large number of cardiac electrophysiology studies have been enabled and performed, including high performance computational investigations of defibrillation on realistic human cardiac geometries. New models for the initiation and growth of tumours have been developed. In particular, cell-based simulations have provided novel insight into the role of stem cells in the colorectal crypt. Chaste is constantly evolving and is now being applied to a far wider range of problems. The code provides modules for handling common scientific computing components, such as meshes and solvers for ordinary and partial differential equations (ODEs/PDEs). Re-use of these components avoids the need for researchers to "re-invent the wheel" with each new project, accelerating the rate of progress in new applications. Chaste is developed using industrially-derived techniques, in particular test-driven development, to ensure code quality, re-use and reliability. In this article we provide examples that illustrate the types of problems Chaste can be used to solve, which can be run on a desktop computer. We highlight some scientific studies that have used or are using Chaste, and the insights they have provided. The source code, both for specific releases and the development version, is available to download under an open source Berkeley Software Distribution (BSD) licence at http://www.cs.ox.ac.uk/chaste, together with details of a mailing list and links to documentation and tutorials

    Macrocheles species (Acari: Macrochelidae) associated with human corpses in Europe

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    The biology of macrochelid mites might offer new venues for the interpretation of the environmental conditions surrounding human death and decomposition. Three human corpses, one from Sweden and two from Spain, have been analysed for the occurrence of Macrochelidae species. Macrocheles muscaedomesticae females were associated with a corpse that was found in a popular beach area of southeast Spain. Their arrival coincides with the occurrence of one of their major carrier species, the filth fly Fannia scalaris, the activity of which peaks during mid-summer. M. glaber specimens were collected from a corpse in a shallow grave in a forest in Sweden at the end of summer, concurrent with the arrival of beetles attracted by odours from the corpse. M. perglaber adults were sampled from a corpse found indoors in the rural surroundings of Granada city, Spain. The phoretic behaviour of this species is similar to that of M. glaber, but being more specific to Scarabaeidae and Geotrupidae dung beetles, most of which favour human faeces. M. muscaedomesticae is known from urban and rural areas and poultry farms; M. glaber from outdoors, particularly the countryside; while M. perglaber from outdoor, rural, and remote, potentially mountainous locations. M. muscaedomesticae and M. perglaber are reported for the first time from the Iberian Peninsula. This is the first record of M. perglaber from human remains

    Macrocheles species (Acari: Macrochelidae) associated with human corpses in Europe

    Get PDF
    The biology of macrochelid mites might offer new venues for the interpretation of the environmental conditions surrounding human death and decomposition. Three human corpses, one from Sweden and two from Spain, have been analysed for the occurrence of Macrochelidae species. Macrocheles muscaedomesticae females were associated with a corpse that was found in a popular beach area of southeast Spain. Their arrival coincides with the occurrence of one of their major carrier species, the filth fly Fannia scalaris, the activity of which peaks during mid-summer. M. glaber specimens were collected from a corpse in a shallow grave in a forest in Sweden at the end of summer, concurrent with the arrival of beetles attracted by odours from the corpse. M. perglaber adults were sampled from a corpse found indoors in the rural surroundings of Granada city, Spain. The phoretic behaviour of this species is similar to that of M. glaber, but being more specific to Scarabaeidae and Geotrupidae dung beetles, most of which favour human faeces. M. muscaedomesticae is known from urban and rural areas and poultry farms; M. glaber from outdoors, particularly the countryside; while M. perglaber from outdoor, rural, and remote, potentially mountainous locations. M. muscaedomesticae and M. perglaber are reported for the first time from the Iberian Peninsula. This is the first record of M. perglaber from human remains

    Seasonal variations in pore water and sediment geochemistry of littoral lake sediments (Asylum Lake, MI, USA)

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    BACKGROUND: Seasonal changes in pore water and sediment redox geochemistry have been observed in many near-surface sediments. Such changes have the potential to strongly influence trace metal distribution and thus create seasonal fluctuations in metal mobility and bioavailability. RESULTS: Seasonal trends in pore water and sediment geochemistry are assessed in the upper 50 cm of littoral kettle lake sediments. Pore waters are always redox stratified, with the least compressed redox stratification observed during fall and the most compressed redox stratification observed during summer. A 2-step sequential sediment extraction yields much more Fe in the first step, targeted at amorphous Fe(III) (hydr)oxides (AEF), then in the second step, which targets Fe(II) monosulfides. Fe extracted in the second step is relatively invariant with depth or season. In contrast, AEF decreases with sediment depth, and is seasonally variable, in agreement with changes in redox stratification inferred from pore water profiles. A 5-step Tessier extraction scheme was used to assess metal association with operationally-defined exchangeable, carbonate, iron and manganese oxide (FMO), organic/sulfide and microwave-digestible residual fractions in cores collected during winter and spring. Distribution of metals in these two seasons is similar. Co, As, Cd, and U concentrations approach detection limits. Fe, Cu and Pb are mostly associated with the organics/sulfides fraction. Cr and Zn are mostly associated with FMO. Mn is primarily associated with carbonates, and Co is nearly equally distributed between the FMO and organics/sulfide fractions. CONCLUSION: This study clearly demonstrates that near-surface lake sediment pore water redox stratification and associated solid phase geochemistry vary significantly with season. This has important ramifications for seasonal changes in the bioavailability and mobility of trace elements. Without rate measurements, it is not possible to quantify the contribution of various processes to natural organic matter degradation. However, the pore water and solid phase data suggest that iron reduction and sulfate reduction are the dominant pathways in the upper 50 cm of these sediments

    Multi-messenger observations of a binary neutron star merger

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    On 2017 August 17 a binary neutron star coalescence candidate (later designated GW170817) with merger time 12:41:04 UTC was observed through gravitational waves by the Advanced LIGO and Advanced Virgo detectors. The Fermi Gamma-ray Burst Monitor independently detected a gamma-ray burst (GRB 170817A) with a time delay of ~1.7 s with respect to the merger time. From the gravitational-wave signal, the source was initially localized to a sky region of 31 deg2 at a luminosity distance of 40+8-8 Mpc and with component masses consistent with neutron stars. The component masses were later measured to be in the range 0.86 to 2.26 Mo. An extensive observing campaign was launched across the electromagnetic spectrum leading to the discovery of a bright optical transient (SSS17a, now with the IAU identification of AT 2017gfo) in NGC 4993 (at ~40 Mpc) less than 11 hours after the merger by the One- Meter, Two Hemisphere (1M2H) team using the 1 m Swope Telescope. The optical transient was independently detected by multiple teams within an hour. Subsequent observations targeted the object and its environment. Early ultraviolet observations revealed a blue transient that faded within 48 hours. Optical and infrared observations showed a redward evolution over ~10 days. Following early non-detections, X-ray and radio emission were discovered at the transient’s position ~9 and ~16 days, respectively, after the merger. Both the X-ray and radio emission likely arise from a physical process that is distinct from the one that generates the UV/optical/near-infrared emission. No ultra-high-energy gamma-rays and no neutrino candidates consistent with the source were found in follow-up searches. These observations support the hypothesis that GW170817 was produced by the merger of two neutron stars in NGC4993 followed by a short gamma-ray burst (GRB 170817A) and a kilonova/macronova powered by the radioactive decay of r-process nuclei synthesized in the ejecta

    Sensitivity of the Cherenkov Telescope Array to a dark matter signal from the Galactic centre

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    We provide an updated assessment of the power of the Cherenkov Telescope Array (CTA) to search for thermally produced dark matter at the TeV scale, via the associated gamma-ray signal from pair-annihilating dark matter particles in the region around the Galactic centre. We find that CTA will open a new window of discovery potential, significantly extending the range of robustly testable models given a standard cuspy profile of the dark matter density distribution. Importantly, even for a cored profile, the projected sensitivity of CTA will be sufficient to probe various well-motivated models of thermally produced dark matter at the TeV scale. This is due to CTA's unprecedented sensitivity, angular and energy resolutions, and the planned observational strategy. The survey of the inner Galaxy will cover a much larger region than corresponding previous observational campaigns with imaging atmospheric Cherenkov telescopes. CTA will map with unprecedented precision the large-scale diffuse emission in high-energy gamma rays, constituting a background for dark matter searches for which we adopt state-of-the-art models based on current data. Throughout our analysis, we use up-to-date event reconstruction Monte Carlo tools developed by the CTA consortium, and pay special attention to quantifying the level of instrumental systematic uncertainties, as well as background template systematic errors, required to probe thermally produced dark matter at these energies
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