1,521 research outputs found
Sinorhizobium meliloti requires a cobalamin-dependent ribonucleotide reductase for symbiosis with its plant host
Vitamin B[subscript 12] (cobalamin) is a critical cofactor for animals and protists, yet its biosynthesis is limited to prokaryotes. We previously showed that the symbiotic nitrogen-fixing alphaproteobacterium Sinorhizobium meliloti requires cobalamin to establish a symbiotic relationship with its plant host, Medicago sativa (alfalfa). Here, the specific requirement for cobalamin in the S. meliloti–alfalfa symbiosis was investigated. Of the three known cobalamin-dependent enzymes in S. meliloti, the methylmalonyl CoA mutase (BhbA) does not affect symbiosis, whereas disruption of the metH gene encoding the cobalamin-dependent methionine synthase causes a significant defect in symbiosis. Expression of the cobalamin-independent methionine synthase MetE alleviates this symbiotic defect, indicating that the requirement for methionine synthesis does not reflect a need for the cobalamin-dependent enzyme. To investigate the function of the cobalamin-dependent ribonucleotide reductase (RNR) encoded by nrdJ, S. meliloti was engineered to express an Escherichia coli cobalamin-independent (class Ia) RNR instead of nrdJ. This strain is severely defective in symbiosis. Electron micrographs show that these cells can penetrate alfalfa nodules but are unable to differentiate into nitrogen-fixing bacteroids and, instead, are lysed in the plant cytoplasm. Flow cytometry analysis indicates that these bacteria are largely unable to undergo endoreduplication. These phenotypes may be due either to the inactivation of the class Ia RNR by reactive oxygen species, inadequate oxygen availability in the nodule, or both. These results show that the critical role of the cobalamin-dependent RNR for survival of S. meliloti in its plant host can account for the considerable resources that S. meliloti dedicates to cobalamin biosynthesis.National Institutes of Health (U.S.) (Grant GM31010)National Institutes of Health (U.S.) (Grant K99 GM083343)Jane Coffin Childs Memorial Fund for Medical Research (Postdoctoral Fellowship
The PACE study: past-year prevalence of tension-type headache and its subtypes in Parma's adult general population.
The mean global prevalence of tension-type headache (TTH) in adult is 42 %. To date, there have been no Italian studies on TTH prevalence in the adult general population. Therefore, we conducted a cross-sectional study, called PACE, aimed at detecting the prevalence of primary headaches in the city of Parma's adult general population. 904 subjects representative of Parma's adult general population were interviewed face to face by a physician of our Headache Centre. Crude past-year prevalence for definite TTH was 19.4 % (95 % CI 16.8-21.9; 18.4 %, 95 % CI 14.6-22.3 in men, and 20.1 %, 95 % CI 16.6-23.6 in women), namely, 9.0 % (95 % CI 7.1-10.8) for infrequent TTH, 9.8 % (95 % CI 7.9-11.8) for frequent TTH, and 0.6 % (95 % CI 0.1-1) for chronic TTH. Crude prevalence for probable TTH was 2.3 % (95 % CI 1.3-3.3; 2 %, 95 % CI 0.6-3.4 in men, and 2.6 %, 95 % CI 1.2-3.9 in women). Our results indicate a TTH prevalence (19.4 %) at the lower limit of data ranges for Western countries, and prevalence rates for infrequent forms (9 %) do not appear different from those of frequent forms (9.8 %)
Prevalence of tension-type headache in adult general population: the PACE study and review of the literature
The mean global prevalence of tension-type headache (TTH) in adult is 42 %. To date, there have been no Italian studies on TTH prevalence in the adult general population. Therefore, we conducted a cross-sectional study, called PACE (PArma CEfalea, or "Headache in Parma"), aimed at detecting the prevalence and clinical features of primary headaches in the city of Parma's adult general population. Crude past-year prevalence for definite TTH was 19.4 % (95 % CI 16.8-21.9), namely 9.0 % (95 % CI 7.1-10.8) for infrequent TTH, 9.8 % (95 % CI 7.9-11.8) for frequent TTH, and 0.6 % (95 % CI 0.1-1) for chronic TTH. Crude prevalence for probable TTH was 2.3 % (95 % CI 1.3-3.3). Our study results indicate a TTH prevalence rate (19.4 %) at the lower limit of data ranges currently available for Western countries, and prevalence rates for infrequent forms (9 %) do not appear much different from those of frequent forms (9.8 %)
Validating a new methodology for optical probe design and image registration in fNIRS studies
Functional near-infrared spectroscopy (fNIRS) is an imaging technique that relies on the principle of shining near-infrared light through tissue to detect changes in hemodynamic activation. An important methodological issue encountered is the creation of optimized probe geometry for fNIRS recordings. Here, across three experiments, we describe and validate a processing pipeline designed to create an optimized, yet scalable probe geometry based on selected regions of interest (ROIs) from the functional magnetic resonance imaging (fMRI) literature. In experiment 1, we created a probe geometry optimized to record changes in activation from target ROIs important for visual working memory. Positions of the sources and detectors of the probe geometry on an adult head were digitized using a motion sensor and projected onto a generic adult atlas and a segmented head obtained from the subject's MRI scan. In experiment 2, the same probe geometry was scaled down to fit a child's head and later digitized and projected onto the generic adult atlas and a segmented volume obtained from the child's MRI scan. Using visualization tools and by quantifying the amount of intersection between target ROIs and channels, we show that out of 21 ROIs, 17 and 19 ROIs intersected with fNIRS channels from the adult and child probe geometries, respectively. Further, both the adult atlas and adult subject-specific MRI approaches yielded similar results and can be used interchangeably. However, results suggest that segmented heads obtained from MRI scans be used for registering children's data. Finally, in experiment 3, we further validated our processing pipeline by creating a different probe geometry designed to record from target ROIs involved in language and motor processing
Molecular Gas in NUclei of GAlaxies (NUGA) I.The counter-rotating LINER NGC4826
We present new high-resolution observations of the nucleus of the
counter-rotating LINER NGC4826, made in the J=1-0 and J=2-1 lines of 12CO with
the IRAM Plateau de Bure mm-interferometer(PdBI).The CO maps, which achieve
0.8''(16pc) resolution in the 2-1 line, fully resolve an inner molecular gas
disk which is truncated at an outer radius of 700pc. The total molecular gas
mass is distributed in a lopsided nuclear disk of 40pc radius and two one-arm
spirals, which develop at different radii in the disk. The distribution and
kinematics of molecular gas in the inner 1kpc of NGC4826 show the prevalence of
different types of m=1 perturbations in the gas. Although dominated by
rotation, the gas kinematics are perturbed by streaming motions related to the
m=1 instabilities. The non-circular motions associated with the inner m=1
perturbations agree qualitatively with the pattern expected for a trailing wave
developed outside corotation ('fast' wave). In contrast, the streaming motions
in the outer m=1 spiral are better explained by a 'slow' wave. A paradoxical
consequence is that the inner m=1 perturbations would not favour AGN feeding.
An independent confirmation that the AGN is not being generously fueled at
present is found in the low values of the gravitational torques exerted by the
stellar potential for R<530pc. The distribution of star formation in the disk
of NGC4826 is also strongly asymmetrical. Massive star formation is still
vigorous, fed by the significant molecular gas reservoir at R<700pc. There is
supporting evidence for a recent large mass inflow episode in NGC4826.
These observations have been made in the context of the NUclei of GAlaxies
(NUGA) project, aimed at the study of the different mechanisms for gas fueling
of AGN.Comment: A&A, 2003, Paper accepted (04/06/03). For a full-resolution version
of this paper see http://www.oan.es/preprint
Evolution of central pattern generators for the control of a five-link bipedal walking mechanism
Central pattern generators (CPGs), with a basis is neurophysiological
studies, are a type of neural network for the generation of rhythmic motion.
While CPGs are being increasingly used in robot control, most applications are
hand-tuned for a specific task and it is acknowledged in the field that generic
methods and design principles for creating individual networks for a given task
are lacking. This study presents an approach where the connectivity and
oscillatory parameters of a CPG network are determined by an evolutionary
algorithm with fitness evaluations in a realistic simulation with accurate
physics. We apply this technique to a five-link planar walking mechanism to
demonstrate its feasibility and performance. In addition, to see whether
results from simulation can be acceptably transferred to real robot hardware,
the best evolved CPG network is also tested on a real mechanism. Our results
also confirm that the biologically inspired CPG model is well suited for legged
locomotion, since a diverse manifestation of networks have been observed to
succeed in fitness simulations during evolution.Comment: 11 pages, 9 figures; substantial revision of content, organization,
and quantitative result
Raman Scattering Study of Ba-doped C60 with t1g States
Raman spectra are reported for Ba doped fullerides, BaxC60(x=3,4,and 6). The
lowest frequency Hg modes split into five components for Ba4C60 and Ba6C60 even
at room temperature, allowing us a quantitative analysis based on the
electron-phonon couping theory. For the superconducting Ba4C60, the density of
states at the Fermi energy was derived as 7 eV-1, while the total value of
electron-phonon coupling \lambda was found to be 1.0, which is comparable to
that of K3C60. The tangential Ag(2) mode, which is known as a sensitive probe
for the degree of charge transfer on C60 molecule, shows a remarkable shift
depending on the Ba concentration, being roughly consistent with the full
charge transfer from Ba to C60. An effect of hybridization between Ba and C60
\pi orbitals is also discussed.Comment: 15 pages, 6 figures submitted to Phys. Rev. B (December 1,1998
Measurement of the top quark-pair production cross section with ATLAS in pp collisions at \sqrt{s}=7\TeV
A measurement of the production cross-section for top quark pairs(\ttbar)
in collisions at \sqrt{s}=7 \TeV is presented using data recorded with
the ATLAS detector at the Large Hadron Collider. Events are selected in two
different topologies: single lepton (electron or muon ) with large
missing transverse energy and at least four jets, and dilepton (,
or ) with large missing transverse energy and at least two jets. In a
data sample of 2.9 pb-1, 37 candidate events are observed in the single-lepton
topology and 9 events in the dilepton topology. The corresponding expected
backgrounds from non-\ttbar Standard Model processes are estimated using
data-driven methods and determined to be events and events, respectively. The kinematic properties of the selected events are
consistent with SM \ttbar production. The inclusive top quark pair production
cross-section is measured to be \sigmattbar=145 \pm 31 ^{+42}_{-27} pb where
the first uncertainty is statistical and the second systematic. The measurement
agrees with perturbative QCD calculations.Comment: 30 pages plus author list (50 pages total), 9 figures, 11 tables,
CERN-PH number and final journal adde
Inclusive search for same-sign dilepton signatures in pp collisions at root s=7 TeV with the ATLAS detector
An inclusive search is presented for new physics in events with two isolated leptons (e or mu) having the same electric charge. The data are selected from events collected from p p collisions at root s = 7 TeV by the ATLAS detector and correspond to an integrated luminosity of 34 pb(-1). The spectra in dilepton invariant mass, missing transverse momentum and jet multiplicity are presented and compared to Standard Model predictions. In this event sample, no evidence is found for contributions beyond those of the Standard Model. Limits are set on the cross-section in a fiducial region for new sources of same-sign high-mass dilepton events in the ee, e mu and mu mu channels. Four models predicting same-sign dilepton signals are constrained: two descriptions of Majorana neutrinos, a cascade topology similar to supersymmetry or universal extra dimensions, and fourth generation d-type quarks. Assuming a new physics scale of 1 TeV, Majorana neutrinos produced by an effective operator V with masses below 460 GeV are excluded at 95% confidence level. A lower limit of 290 GeV is set at 95% confidence level on the mass of fourth generation d-type quarks
Measurement of inclusive two-particle angular correlations in pp collisions with the ATLAS detector at the LHC
We present a measurement of two-particle angular correlations in proton- proton collisions at s√=900 GeV and 7 TeV. The collision events were collected during 2009 and 2010 with the ATLAS detector at the Large Hadron Collider using a single-arm minimum bias trigger. Correlations are measured for charged particles produced in the kinematic range of transverse momentum p T > 100 MeV and pseudorapidity |η| < 2.5. A complex structure in pseudorapidity and azimuth is observed at both collision energies. Results are compared to pythia 8 and herwig++ as well as to the AMBT2B, DW and Perugia 2011 tunes of pythia 6. The data are not satisfactorily described by any of these models
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