235 research outputs found

    Whole genome sequencing of a banana wild relative Musa itinerans provides insights into lineage-specific diversification of the Musa genus

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    Crop wild relatives are valuable resources for future genetic improvement. Here, we report the de novo genome assembly of Musa itinerans, a disease-resistant wild banana relative in subtropical China. The assembled genome size was 462.1 Mb, covering 75.2% of the genome (615.2Mb) and containing 32, 456 predicted protein-coding genes. Since the approximate divergence around 5.8 million years ago, the genomes of Musa itinerans and Musa acuminata have shown conserved collinearity. Gene family expansions and contractions enrichment analysis revealed that some pathways were associated with phenotypic or physiological innovations. These include a transition from wood to herbaceous in the ancestral Musaceae, intensification of cold and drought tolerances, and reduced diseases resistance genes for subtropical marginally distributed Musa species. Prevalent purifying selection and transposed duplications were found to facilitate the diversification of NBS-encoding gene families for two Musa species. The population genome history analysis of M. itinerans revealed that the fluctuated population sizes were caused by the Pleistocene climate oscillations, and that the formation of Qiongzhou Strait might facilitate the population downsizing on the isolated Hainan Island about 10.3 Kya. The qualified assembly of the M. itinerans genome provides deep insights into the lineage-specific diversification and also valuable resources for future banana breeding

    Lithospheric dripping in a soft collision zone: Insights from late Paleozoic magmatism suites of the eastern Central Asian Orogenic Belt

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    The closure of Paleo-Asian Ocean is considered to have occurred along the Solonker Suture in the southernmost segment of the Central Asian Orogenic Belt (CAOB), the largest Phanerozoic accretionary orogen on the globe. The suture branches to the east to form the northern Hegenshan–Heihe Suture and the southern Solonker–Changchun Suture. The Hegenshan–Heihe Suture is an ideal natural laboratory for studying the post-collisional geodynamic processes operating in a soft collision zone driven by divergent double-sided subduction. Here we report results from an integrated study of the petrology, geochronology, geochemistry, and Sr–Nd–Hf isotopic compositions of the Early Carboniferous–Early Permian magmatic suite in the Hailar Basin of the Xing’an–Erguna Block. The Early Carboniferous igneous rocks are represented by 356–349 Ma andesitic tuffs, exhibiting typical subduction-related features, such as enrichment in large-ion lithophile elements and depletion in high-field-strength elements. These features, together with the relatively depleted Sr–Nd–Hf isotopic compositions, constant Nb/Y values, but highly variable Rb/Y and Ba values indicate that these rocks were generated by partial melting of a depleted mantle wedge metasomatized by slab-derived fluids. The Late Carboniferous–Early Permian magmatic suite (317–295 Ma) is characterized by high Sr contents (313–1080 ppm) and low Y contents (5–13 ppm), and these can be subdivided into calc-alkaline adakitic rocks and high-K calc-alkaline adakitic rocks. The calc-alkaline adakitic rocks have higher values of Sr/Y, (Sm/Yb)source normalized, and Mg#, and lower values of Y, Ybsource normalized, and K2O/Na2O than the high-K calc-alkaline adakitic rocks, which suggests that the former was generated by partial melting of foundered lower continental crust and the latter by partial melting of normal lower continental crust. Based on our new data, in conjunction with those in previous studies, we conclude that the tectonic evolution of the Hegenshan–Heihe Suture involved Early Carboniferous double-sided subduction of the Nenjiang Ocean, latest Early Carboniferous soft collision between the Xing’an–Erguna and Songliao blocks, and Late Carboniferous– Early Permian post-collisional extension. We also propose a new geodynamic scenario in which removal of the lithospheric root might have occurred in a soft collision zone during the post-collision period via repeated and localized lithospheric dripping, which results from combined effects of hydration weakening of the lithosphere caused by pre-collision subduction and asthenospheric stirring triggered by slab break-off.Zheng Ji, Wen-Chun Ge, M. Santosh, Chuan-Biao Wan, Yan-Long Zhang, Jun-Hui Bi, Hao Yang, Yu Dong, Yan Jin

    Search for strong gravity in multijet final states produced in pp collisions at √s=13 TeV using the ATLAS detector at the LHC

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    A search is conducted for new physics in multijet final states using 3.6 inverse femtobarns of data from proton-proton collisions at √s = 13TeV taken at the CERN Large Hadron Collider with the ATLAS detector. Events are selected containing at least three jets with scalar sum of jet transverse momenta (HT) greater than 1TeV. No excess is seen at large HT and limits are presented on new physics: models which produce final states containing at least three jets and having cross sections larger than 1.6 fb with HT > 5.8 TeV are excluded. Limits are also given in terms of new physics models of strong gravity that hypothesize additional space-time dimensions

    Dijet production in √s = 7 TeV pp collisions with large rapidity gaps at the ATLAS experiment

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    A 6.8 nb−¹ sample of pp collision data collected under low-luminosity conditions at √s = 7 TeV by the ATLAS detector at the Large Hadron Collider is used to study diffractive dijet production. Events containing at least two jets with pT > 20 GeV are selected and analysed in terms of variables which discriminate between diffractive and non-diffractive processes. Cross sections are measured differentially in ΔηF, the size of the observable forward region of pseudorapidity which is devoid of hadronic activity, and in an estimator, ξ˜, of the fractional momentum loss of the proton assuming single diffractive dissociation (pp → p X). Model comparisons indicate a dominant non-diffractive contribution up to moderately large ηF and small ξ˜, with a diffractive contribution which is significant at the highest ΔηF and the lowest ξ˜. The rapidity-gap survival probability is estimated from comparisons of the data in this latter region with predictions based on diffractive parton distribution functions

    Measurement of jet charge in dijet events from √s = 8  TeV pp collisions with the ATLAS detector

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    The momentum-weighted sum of the charges of tracks associated to a jet is sensitive to the charge of the initiating quark or gluon. This paper presents a measurement of the distribution of momentum-weighted sums, called jet charge, in dijet events using 20.3 fb−¹ of data recorded with the ATLAS detector at √s = 8 TeV in pp collisions at the LHC. The jet charge distribution is unfolded to remove distortions from detector effects and the resulting particle-level distribution is compared with several models. The pT dependence of the jet charge distribution average and standard deviation are compared to predictions obtained with several leading-order and next-to-leading-order parton distribution functions. The data are also compared to different Monte Carlo simulations of QCD dijet production using various settings of the free parameters within these models. The chosen value of the strong coupling constant used to calculate gluon radiation is found to have a significant impact on the predicted jet charge. There is evidence for a pT dependence of the jet charge distribution for a given jet flavor. In agreement with perturbative QCD predictions, the data show that the average jet charge of quark-initiated jets decreases in magnitude as the energy of the jet increases

    Search for the production of single vector-like and excited quarks in the Wt final state in pp collisions at √s=8 TeV with the ATLAS detector

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    A search for vector-like quarks and excited quarks in events containing a top quark and a W boson in the final state is reported here. The search is based on 20.3 fb−1 of proton-proton collision data taken at the LHC at a centre-of-mass energy of 8 TeV recorded by the ATLAS detector. Events with one or two leptons, and one, two or three jets are selected with the additional requirement that at least one jet contains a b-quark. Single-lepton events are also required to contain at least one large-radius jet from the hadronic decay of a high-pTW boson or a top quark. No significant excess over the expected background is observed and upper limits on the cross-section times branching ratio for different vector-like quark and excited-quark model masses are derived. For the excited-quark production and decay to Wt with unit couplings, quarks with masses below 1500 GeV are excluded and coupling-dependent limits are set

    Combination of searches for WW, WZ, and ZZ resonances in pp collisions at s=8 TeV with the ATLAS detector

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    The ATLAS experiment at the CERN Large Hadron Collider has performed searches for new, heavy bosons decaying to WW, WZ and ZZ final states in multiple decay channels using 20.3 fb-1 of pp collision data at s=8 TeV. In the current study, the results of these searches are combined to provide a more stringent test of models predicting heavy resonances with couplings to vector bosons. Direct searches for a charged diboson resonance decaying to WZ in the ℓνℓ'ℓ' (ℓ=μ, e), ℓℓqq-, ℓνqq- and fully hadronic final states are combined and upper limits on the rate of production times branching ratio to the WZ bosons are compared with predictions of an extended gauge model with a heavy W' boson. In addition, direct searches for a neutral diboson resonance decaying to WW and ZZ in the ℓℓqq-, ℓνqq-, and fully hadronic final states are combined and upper limits on the rate of production times branching ratio to the WW and ZZ bosons are compared with predictions for a heavy, spin-2 graviton in an extended Randall-Sundrum model where the Standard Model fields are allowed to propagate in the bulk of the extra dimension
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