86 research outputs found
Fruit Growth and Sensory Evaluation of ´Hayward´ Kiwifruit in Response to Preharvest Calcium Chloride Application and Orchard Location
In order to receive reliable results in the effect of preharvest calcium chloride (CaCl2) application on fruit growth and sensory characteristics of kiwifruit (Actinidia deliciosa cultivar ‘Hayward’) at the harvest time, a field experiment was carried out in two commercial orchards at different locations. The vines were sprayed with CaCl2 (1.5%), one, two, or three times in 35, 85 and 125 days after full bloom. The results showed that CaCl2 treatment significantly reduced fruit size, fresh weight and total dry matter content. Moreover, fruit growth relative attributes such as relative growth index, daily relative growth rate, daily transpiration rate, total carbon received by fruit and yield threshold pressure significantly decreased by thrice application. After thrice application of CaCl2, fruits showed better sensory quality. Overall, one time preharvest CaCl2 application had no-significant effect on the most fruits characteristics, while thrice application of CaCl2 could delay fruit ripening process
A novel pathogenic variant in an Iranian Ataxia telangiectasia family revealed by next-generation sequencing followed by in silico analysis
Ataxia telangiectasia (A-T) is a neurodegenerative autosomal recessive disorder with the main characteristics of progressive cerebellar degeneration, sensitivity to ionizing radiation, immunodeficiency, telangiectasia, premature aging, recurrent sinopulmonary infections, and increased risk of malignancy, especially of lymphoid origin. Ataxia Telangiectasia Mutated gene, ATM, as a causative gene for the A-T disorder, encodes the ATM protein, which plays an important role in the activation of cell-cycle checkpoints and initiation of DNA repair in response to DNA damage. Targeted next-generation sequencing (NGS) was performed on an Iranian 5-year-old boy presented with truncal and limb ataxia, telangiectasia of the eye, Hodgkin lymphoma, hyper pigmentation, total alopecia, hepatomegaly, and dysarthria. Sanger sequencing was used to confirm the candidate pathogenic variants. Computational docicing was done using the HEX software to examine how this change affects the interactions of ATM with the upstream and downstream proteins. Three different variants were identified comprising two homozygous SNPs and one novel homozygous frameshift variant (c.80468047delTA, p.Thr2682ThrfsX5), which creates a stop codon in exon 57 leaving the protein truncated at its C-terminal portion. Therefore, the activation and phosphorylation of target proteins are lost. Moreover, the HEX software confirmed that the mutated protein lost its interaction with upstream and downstream proteins. The variant was classified as pathogenic based on the American College of Medical Genetics and Genomics guideline. This study expands the spectrum of ATM pathogenic variants in Iran and demonstrates the utility of targeted NGS in genetic diagnostics. (C) 2017 Published by Elsevier B.V
Oroclinal bending, distributed thrust and strike-slip faulting, and the accommodation of Arabia–Eurasia convergence in NE Iran since the Oligocene
Regional shortening is accommodated across NE Iran in response to the collision of Arabia with Eurasia. We examine how N–S shortening is achieved on major thrust systems bounding the eastern branch of the Alborz (east of 57°E), Sabzevar and Kuh-e-Sorkh mountain ranges, which lie south of the Kopeh Dagh mountains in NE Iran. Although these ranges have experienced relatively few large earthquakes over the last 50 yr, they have been subject to a number of devastating historical events at Neyshabur, Esfarayen and Sabzevar. A significant change in the tectonics of the eastern Alborz occurs directly south of the Central Kopeh Dagh, near 57°E. To the east, shortening occurs on major thrust faults which bound the southern margin of the range, resulting in significant crustal thickening, and forming peaks up to 3000 m high. Active shortening dies out eastward into Afghanistan, which is thought to belong to stable Eurasia. The rate of shortening across thrust faults bounding the south side of the eastern Alborz north of Neyshabur is determined using optically stimulated luminescence dating of displaced river deposits, and is likely to be 0.4–1.7 mm yr^(−1). Shortening across the Sabzevar range 150 km west of Neyshabur has previously been determined at 0.4–0.6 mm yr^(−1), although reassessment of the rate here suggests it may be as high as 1 mm yr^(−1). Migration of thrust faulting into foreland basins is common across NE Iran, especially in the Esfarayen region near 57°E, where the northward deflection of the East Alborz range reaches a maximum of 200 ± 20 km (from its presumed linear E–W strike at the beginning of the Oligocene). West of 57°E, the tectonics of the Alborz are affected by the westward motion of the South Caspian region, which results in the partitioning of shortening onto separate thrust and left-lateral strike-slip faults north and south of the range. At the longitude of 59°E, published GPS velocities indicate that 50 per cent of the overall shortening across NE Iran is accommodated in the Kopeh Dagh. The remaining 50 per cent regional shortening must therefore be accommodated south of the Kopeh Dagh, in the eastern Alborz and Kuh-e-Sorkh ranges. Assuming present day rates of slip and the fault kinematics are representative of the Late Cenozoic deformation in NE Iran, the total 200 ± 20 km N–S shortening across the eastern Alborz and Kopeh Dagh mountains since the beginning of uplift of the Kopeh Dagh basin would be accommodated in 30 ± 8 Ma. Although this extrapolation may be inappropriate over such a long timescale, the age is nevertheless consistent with geological estimates of post Early-to-Middle Oligocene (<30 Ma) for the onset of Kopeh Dagh uplift
Microseismicity and seismotectonics of the South Caspian Lowlands, NE Iran
This paper is concerned with the microseismicity and seismotectonics of the eastern South Caspian Sea region, where the East Alborz mountains descend to meet the South Caspian Lowlands of NE Iran. To better understand the present-day tectonics and seismicity of this region, which includes the cities of Gorgan and Gonbad-e-Qabus (combined population 500 000), we installed a temporary local seismic network across the area for 6 months between 2009 and 2010. We analysed the seismicity and focal mechanisms together with data from the permanent networks of the Institute of Geophysics, University of Tehran (IGUT) and the International Institute of Earthquake Engineering and Seismology (IIEES), based in Tehran. Microseismicity is focused primarily on the Shahrud fault system, which bounds the east Alborz range to the south. Relatively few earthquakes are associated with the Khazar thrust fault, which bounds the north side of the range. A cluster of shallow microseismicity (<15 km depth) occurs 40 km north of the Khazar fault (within the South Caspian Lowlands; SCL), an area typically thought to be non-deforming. This area coincides with the location of three relatively deep thrust earthquakes (M_w 5.3–5.5) which occurred in 1999, 2004 and 2005. Inversion of teleseismic body waveforms allows us to constrain the depth of these earthquakes at 26–29 km. Although significant sedimentation throughout the SCL obscures any expression of recent fault activity at the surface, focal mechanisms of well-located events from the shallow cluster of micro-seismicity show a significant component of left-lateral strike-slip motion (assuming slip occurs on NE–SW fault planes, typical of active faults in the region), as well as a small normal component. Inversion of traveltimes for well-located events in our network yields a velocity structure for the region, and a Moho depth of 41 km. The pattern of deep thrust and shallow normal seismicity could be explained by bending of the rigid South Caspian crust as it underthrusts the East Alborz mountains and Central Iran. Late Quaternary reorganization of drainage systems in the SCL may be the result of shallow normal fault activity within the SCL
Socioeconomic inequalities in prevalence, awareness, treatment and control of hypertension: evidence from the PERSIAN cohort study
Background Elevated blood pressure is associated with cardiovascular disease, stroke and chronic kidney disease. In this study, we examined the socioeconomic inequality and its related factors in prevalence, Awareness, Treatment and Control (ATC) of hypertension (HTN) in Iran. Method The study used data from the recruitment phase of The Prospective Epidemiological Research Studies in IrAN (PERSIAN). A sample of 162,842 adults aged > = 35 years was analyzed. HTN was defined according to the Joint National Committee)JNC-7(. socioeconomic inequality was measured using concentration index (Cn) and curve. Results The mean age of participants was 49.38(SD = +/- 9.14) years and 44.74% of the them were men. The prevalence of HTN in the total population was 22.3%(95% CI: 20.6%; 24.1%), and 18.8%(95% CI: 16.8%; 20.9%) and 25.2%(95% CI: 24.2%; 27.7%) in men and women, respectively. The percentage of awareness treatment and control among individuals with HTN were 77.5%(95% CI: 73.3%; 81.8%), 82.2%(95% CI: 70.2%; 81.6%) and 75.9%(95% CI: 70.2%; 81.6%), respectively. The Cn for prevalence of HTN was -0.084. Two factors, age (58.46%) and wealth (32.40%), contributed most to the socioeconomic inequality in the prevalence of HTN. Conclusion The prevalence of HTN was higher among low-SES individuals, who also showed higher levels of awareness. However, treatment and control of HTN were more concentrated among those who had higher levels of SES, indicating that people at a higher risk of adverse event related to HTN (the low SES individuals) are not benefiting from the advantage of treatment and control of HTN. Such a gap between diagnosis (prevalence) and control (treatment and control) of HTN needs to be addressed by public health policymakers
Prevalence, awareness, treatment, and control of hypertension based on ACC/AHA versus JNC7 guidelines in the PERSIAN cohort study
In this cross-sectional population-based study, we used the baseline data of the Prospective Epidemiologic Research Studies in IrAN cohort study collected in Iran from 2014 to 2020. The main outcomes were the prevalence of hypertension and proportion of awareness, treatment, and control based on the 2017 ACC/AHA guideline compared to the seventh report of the Joint National Committee (JNC7). Of the total of 163,770 participants, aged 35–70 years, 55.2% were female. The sex-age standardized prevalence of hypertension was 22.3% (95% CI 20.6, 24.1) based on the JNC7 guideline and 36.5% (31.1, 41.8) based on the ACC/AHA guideline. A total of 24,312 participants [14.1% (10.1, 18.1)] were newly diagnosed based on the ACC/AHA guideline. Compared to adults diagnosed with hypertension based on the JNC7 guideline, the newly diagnosed participants were mainly young literate males who had low levels of risk factors and were free from conventional comorbidities of hypertension. About 30.7% (25.9, 35.4) of them (4.3% of the entire population) were eligible for pharmacologic intervention based on the ACC/AHA guideline. Implementation of the new guideline may impose additional burden on health systems. However, early detection and management of elevated blood pressure may reduce the ultimate burden of hypertension in Iran
Global, regional, and national burden of colorectal cancer and its risk factors, 1990–2019: a systematic analysis for the Global Burden of Disease Study 2019
Funding: F Carvalho and E Fernandes acknowledge support from Fundação para a Ciência e a Tecnologia, I.P. (FCT), in the scope of the project UIDP/04378/2020 and UIDB/04378/2020 of the Research Unit on Applied Molecular Biosciences UCIBIO and the project LA/P/0140/2020 of the Associate Laboratory Institute for Health and Bioeconomy i4HB; FCT/MCTES through the project UIDB/50006/2020. J Conde acknowledges the European Research Council Starting Grant (ERC-StG-2019-848325). V M Costa acknowledges the grant SFRH/BHD/110001/2015, received by Portuguese national funds through Fundação para a Ciência e Tecnologia (FCT), IP, under the Norma Transitória DL57/2016/CP1334/CT0006.proofepub_ahead_of_prin
The global burden of cancer attributable to risk factors, 2010-19 : a systematic analysis for the Global Burden of Disease Study 2019
Background Understanding the magnitude of cancer burden attributable to potentially modifiable risk factors is crucial for development of effective prevention and mitigation strategies. We analysed results from the Global Burden of Diseases, Injuries, and Risk Factors Study (GBD) 2019 to inform cancer control planning efforts globally. Methods The GBD 2019 comparative risk assessment framework was used to estimate cancer burden attributable to behavioural, environmental and occupational, and metabolic risk factors. A total of 82 risk-outcome pairs were included on the basis of the World Cancer Research Fund criteria. Estimated cancer deaths and disability-adjusted life-years (DALYs) in 2019 and change in these measures between 2010 and 2019 are presented. Findings Globally, in 2019, the risk factors included in this analysis accounted for 4.45 million (95% uncertainty interval 4.01-4.94) deaths and 105 million (95.0-116) DALYs for both sexes combined, representing 44.4% (41.3-48.4) of all cancer deaths and 42.0% (39.1-45.6) of all DALYs. There were 2.88 million (2.60-3.18) risk-attributable cancer deaths in males (50.6% [47.8-54.1] of all male cancer deaths) and 1.58 million (1.36-1.84) risk-attributable cancer deaths in females (36.3% [32.5-41.3] of all female cancer deaths). The leading risk factors at the most detailed level globally for risk-attributable cancer deaths and DALYs in 2019 for both sexes combined were smoking, followed by alcohol use and high BMI. Risk-attributable cancer burden varied by world region and Socio-demographic Index (SDI), with smoking, unsafe sex, and alcohol use being the three leading risk factors for risk-attributable cancer DALYs in low SDI locations in 2019, whereas DALYs in high SDI locations mirrored the top three global risk factor rankings. From 2010 to 2019, global risk-attributable cancer deaths increased by 20.4% (12.6-28.4) and DALYs by 16.8% (8.8-25.0), with the greatest percentage increase in metabolic risks (34.7% [27.9-42.8] and 33.3% [25.8-42.0]). Interpretation The leading risk factors contributing to global cancer burden in 2019 were behavioural, whereas metabolic risk factors saw the largest increases between 2010 and 2019. Reducing exposure to these modifiable risk factors would decrease cancer mortality and DALY rates worldwide, and policies should be tailored appropriately to local cancer risk factor burden. Copyright (C) 2022 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license.Peer reviewe
Mapping local patterns of childhood overweight and wasting in low- and middle-income countries between 2000 and 2017
A double burden of malnutrition occurs when individuals, household members or communities experience both undernutrition and overweight. Here, we show geospatial estimates of overweight and wasting prevalence among children under 5 years of age in 105 low- and middle-income countries (LMICs) from 2000 to 2017 and aggregate these to policy-relevant administrative units. Wasting decreased overall across LMICs between 2000 and 2017, from 8.4% (62.3 (55.1–70.8) million) to 6.4% (58.3 (47.6–70.7) million), but is predicted to remain above the World Health Organization’s Global Nutrition Target of <5% in over half of LMICs by 2025. Prevalence of overweight increased from 5.2% (30 (22.8–38.5) million) in 2000 to 6.0% (55.5 (44.8–67.9) million) children aged under 5 years in 2017. Areas most affected by double burden of malnutrition were located in Indonesia, Thailand, southeastern China, Botswana, Cameroon and central Nigeria. Our estimates provide a new perspective to researchers, policy makers and public health agencies in their efforts to address this global childhood syndemic
Adolescent transport and unintentional injuries: a systematic analysis using the Global Burden of Disease Study 2019
Background: Globally, transport and unintentional injuries persist as leading preventable causes of mortality and morbidity for adolescents. We sought to report comprehensive trends in injury-related mortality and morbidity for adolescents aged 10–24 years during the past three decades. Methods: Using the Global Burden of Disease, Injuries, and Risk Factors 2019 Study, we analysed mortality and disability-adjusted life-years (DALYs) attributed to transport and unintentional injuries for adolescents in 204 countries. Burden is reported in absolute numbers and age-standardised rates per 100 000 population by sex, age group (10–14, 15–19, and 20–24 years), and sociodemographic index (SDI) with 95% uncertainty intervals (UIs). We report percentage changes in deaths and DALYs between 1990 and 2019. Findings: In 2019, 369 061 deaths (of which 214 337 [58%] were transport related) and 31·1 million DALYs (of which 16·2 million [52%] were transport related) among adolescents aged 10–24 years were caused by transport and unintentional injuries combined. If compared with other causes, transport and unintentional injuries combined accounted for 25% of deaths and 14% of DALYs in 2019, and showed little improvement from 1990 when such injuries accounted for 26% of adolescent deaths and 17% of adolescent DALYs. Throughout adolescence, transport and unintentional injury fatality rates increased by age group. The unintentional injury burden was higher among males than females for all injury types, except for injuries related to fire, heat, and hot substances, or to adverse effects of medical treatment. From 1990 to 2019, global mortality rates declined by 34·4% (from 17·5 to 11·5 per 100 000) for transport injuries, and by 47·7% (from 15·9 to 8·3 per 100 000) for unintentional injuries. However, in low-SDI nations the absolute number of deaths increased (by 80·5% to 42 774 for transport injuries and by 39·4% to 31 961 for unintentional injuries). In the high-SDI quintile in 2010–19, the rate per 100 000 of transport injury DALYs was reduced by 16·7%, from 838 in 2010 to 699 in 2019. This was a substantially slower pace of reduction compared with the 48·5% reduction between 1990 and 2010, from 1626 per 100 000 in 1990 to 838 per 100 000 in 2010. Between 2010 and 2019, the rate of unintentional injury DALYs per 100 000 also remained largely unchanged in high-SDI countries (555 in 2010 vs 554 in 2019; 0·2% reduction). The number and rate of adolescent deaths and DALYs owing to environmental heat and cold exposure increased for the high-SDI quintile during 2010–19. Interpretation: As other causes of mortality are addressed, inadequate progress in reducing transport and unintentional injury mortality as a proportion of adolescent deaths becomes apparent. The relative shift in the burden of injury from high-SDI countries to low and low–middle-SDI countries necessitates focused action, including global donor, government, and industry investment in injury prevention. The persisting burden of DALYs related to transport and unintentional injuries indicates a need to prioritise innovative measures for the primary prevention of adolescent injury. Funding: Bill & Melinda Gates Foundation
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