Using bi-spectral imaging technology for simulated online-weed control in winter wheat and maize

In spring 2011, two field trials on site-specific weed control in winter wheat and maize were carried out at Ihinger Hof research station of the University of Hohenheim. For the image acquisition, bi-spectral cameras were mounted on a vehicle. These cameras are able to take images free from disturbances by soil, mulch and stones. Images and the corresponding GPS-data were stored on-the-go. Afterwards, the images were analyzed by a weed recognition software. Weed infestation was mapped in consideration of weed species and weeds grouped according to their herbicide sensitivity. In order to simulate an online herbicide application, a onesided moving average of order five was used for the weed mapping. This kind of rearward calculation uses only the data of weed infestation which were already assessed behind or directly in the current position of the vehicle. The calculated weed distribution maps were checked by visual grid sampling. Herbicide application maps were generated by applying weed thresholds on the weed distribution maps. The herbicide application based on the maps was conducted by a multiple sprayer which allows the application of up to three herbicides independently from each other in a single pass across the field. Later on, the performance of the herbicide application was controlled again by visual grid sampling. Compared to a uniform herbicide application, the sitespecific weed control saved 83 % and 58 % herbicides respectively in winter wheat and 66 % in maize. The average efficacy of the site-specific herbicide application system in winter wheat was 70 % of the conventional herbicide application. Keywords: Bi-spectral cameras, herbicide application, image analysis, site-specific, weed controlSimulation einer online Unkrautkontrolle in Winterweizen und Mais unter Verwendung von BispektralkamerasIm Frühjahr 2011 wurden auf der Versuchsstation Ihinger Hof der Universität Hohenheim Feldversuche zur teilschlagspezifischen online-Unkrautkontrolle in den Kulturen Winterweizen und Mais durchgeführt. Die Bildaufnahme für die Erfassung der Verunkrautung mit Hilfe von digitaler Bildverarbeitung erfolgte mit einem Kamerafahrzeug, auf welchem Bispektralkameras montiert waren. Die Verwendung dieser Kameras gewährleistet die Aufnahme von Bildern, die von Boden, Steinen und Mulch weitestgehend ungestört sind. Zusammen mit den Bildern wurden die korrespondierenden Geokoordinaten gespeichert. Nach der anschließenden Bildauswertung unter Verwendung digitaler Bildauswerteverfahren erfolgte eine Kartierung der ermittelten Verunkrautung nach Unkrautarten bzw. Unkräuter gruppiert gemäß der Herbizidempfindlichkeit. Für die Kartierung wurden einseitig gleitende Mittelwerte der fünften Ordnung berechnet. Die Bestimmung des Mittelwertes erfolgte jeweils mit den vier Messwerten die zeitlich gesehen hinter dem aktuellen Messwert lagen und dem aktuellen Messwert. Durch diese rückwärtsgewandte Mittelwertbildung wurde die online Bildverarbeitung simuliert. Zur Überprüfung der Plausibilität der berechneten Unkrautverteilungskarten wurden die aus einer visuellen Rasterbonitur stammenden Daten herangezogen.Unter Verwendung von Schadschwellen wurden die auf der Basis der Bildanalyse erstellten Unkrautverteilungskarten für die Berechnung von Applikationskarten benutzt. Die Umsetzung der Applikationskarten erfolgte mit einer Dreikammerspritze, welche eine simultane Applikation von bis zu drei Herbiziden unabhängig voneinander erlaubt. Eine Erfolgskontrolle der durchgeführten Herbizidapplikation erfolgte im zeitlichen Abstand wiederum anhand einer visuellen Rasterbonitur. Im Vergleich zur betriebsüblichen Variante wurde durch die teilschlagspezifische Herbizidapplikation im Winterweizen eine Herbizideinsparung von 83 % bzw. 58 % und im Mais von 66 % realisiert. Die durchschnittliche Wirksamkeit der teilschlagspezifischen Herbizidmaßnahme im Winterweizen betrug 70 % der betriebsüblichen Variante. Stichwörter: Bildverarbeitung, Bispektralkameras, Herbizidapplikation, teilschlagspezifisch, Unkrautkontroll

Dispositivo de lectura de microarrays de tipo eléctrico y reutilizable

Dispositivo de lectura de microarrays de tipo eléctrico y reutilizable. El objeto principal de la presente invención es un dispositivo de lectura eléctrica de microarrays que se puede limpiar y volver a utilizar más de una vez. El dispositivo (1, 1’, 1”) de lectura de microarrays (6) tiene las siguientes partes: una base (2, 2’, 2”), que tiene unos medios de apoyo (3, 3’, 3”) para situar la superficie de test (7) del microarray (6) en paralelo a una superficie de lectura (4) de la base (2, 2’, 2”); una matriz de transductores (5, 5’, 5”), dispuestos sobre la superficie de lectura (4) de la base (2, 2’, 2”), que traducen una variación de una magnitud eléctrica o química en una variación de una magnitud eléctrica; y unos medios de lectura (10), conectados a los transductores (5, 5’, 5”), que interpretan las señales eléctricas de los transductores (5, 5’, 5”).Peer reviewedConsejo Superior de Investigaciones Científicas (España)A1 Solicitud de patentes con informe sobre el estado de la técnic

Protein-Induced Modulation of Chloroplast Membrane Morphology

Organelles are surrounded by membranes with a distinct lipid and protein composition. While it is well established that lipids affect protein functioning and vice versa, it has been only recently suggested that elevated membrane protein concentrations may affect the shape and organization of membranes. We therefore analyzed the effects of high chloroplast envelope protein concentrations on membrane structures using an in vivo approach with protoplasts. Transient expression of outer envelope proteins or protein domains such as CHUP1-TM–GFP, outer envelope protein of 7 kDa–GFP, or outer envelope protein of 24 kDa–GFP at high levels led to the formation of punctate, circular, and tubular membrane protrusions. Expression of inner membrane proteins such as translocase of inner chloroplast membrane 20, isoform II (Tic20-II)–GFP led to membrane protrusions including invaginations. Using increasing amounts of DNA for transfection, we could show that the frequency, size, and intensity of these protrusions increased with protein concentration. The membrane deformations were absent after cycloheximide treatment. Co-expression of CHUP1-TM–Cherry and Tic20-II–GFP led to membrane protrusions of various shapes and sizes including some stromule-like structures, for which several functions have been proposed. Interestingly, some structures seemed to contain both proteins, while others seem to contain one protein exclusively, indicating that outer and inner envelope dynamics might be regulated independently. While it was more difficult to investigate the effects of high expression levels of membrane proteins on mitochondrial membrane shapes using confocal imaging, it was striking that the expression of the outer membrane protein Tom20 led to more elongate mitochondria. We discuss that the effect of protein concentrations on membrane structure is possibly caused by an imbalance in the lipid to protein ratio and may be involved in a signaling pathway regulating membrane biogenesis. Finally, the observed phenomenon provides a valuable experimental approach to investigate the relationship between lipid synthesis and membrane protein expression in future studies

Ferromagnetic phase transition in a Heisenberg fluid: Monte Carlo simulations and Fisher corrections to scaling

The magnetic phase transition in a Heisenberg fluid is studied by means of the finite size scaling (FSS) technique. We find that even for larger systems, considered in an ensemble with fixed density, the critical exponents show deviations from the expected lattice values similar to those obtained previously. This puzzle is clarified by proving the importance of the leading correction to the scaling that appears due to Fisher renormalization with the critical exponent equal to the absolute value of the specific heat exponent $\alpha$. The appearance of such new corrections to scaling is a general feature of systems with constraints.Comment: 12 pages, 2 figures; submitted to Phys. Rev. Let

Validation Study for Non-Invasive Prediction of IDH Mutation Status in Patients with Glioma Using In Vivo 1H-Magnetic Resonance Spectroscopy and Machine Learning

The isocitrate dehydrogenase (IDH) mutation status is an indispensable prerequisite for diagnosis of glioma (astrocytoma and oligodendroglioma) according to the WHO classification of brain tumors 2021 and is a potential therapeutic target. Usually, immunohistochemistry followed by sequencing of tumor tissue is performed for this purpose. In clinical routine, however, non-invasive determination of IDH mutation status is desirable in cases where tumor biopsy is not possible and for monitoring neuro-oncological therapies. In a previous publication, we presented reliable prediction of IDH mutation status employing proton magnetic resonance spectroscopy (1H-MRS) on a 3.0 Tesla (T) scanner and machine learning in a prospective cohort of 34 glioma patients. Here, we validated this approach in an independent cohort of 67 patients, for which 1H-MR spectra were acquired at 1.5 T between 2002 and 2007, using the same data analysis approach. Despite different technical conditions, a sensitivity of 82.6% (95% CI, 61.2-95.1%) and a specificity of 72.7% (95% CI, 57.2-85.0%) could be achieved. We concluded that our 1H-MRS based approach can be established in a routine clinical setting with affordable effort and time, independent of technical conditions employed. Therefore, the method provides a non-invasive tool for determining IDH status that is well-applicable in an everyday clinical setting

CUX1-related neurodevelopmental disorder: deep insights into phenotype-genotype spectrum and underlying pathology

Heterozygous, pathogenic CUX1 variants are associated with global developmental delay or intellectual disability. This study delineates the clinical presentation in an extended cohort and investigates the molecular mechanism underlying the disorder in a Cux1+/− mouse model. Through international collaboration, we assembled the phenotypic and molecular information for 34 individuals (23 unpublished individuals). We analyze brain CUX1 expression and susceptibility to epilepsy in Cux1+/− mice. We describe 34 individuals, from which 30 were unrelated, with 26 different null and four missense variants. The leading symptoms were mild to moderate delayed speech and motor development and borderline to moderate intellectual disability. Additional symptoms were muscular hypotonia, seizures, joint laxity, and abnormalities of the forehead. In Cux1+/− mice, we found delayed growth, histologically normal brains, and increased susceptibility to seizures. In Cux1+/− brains, the expression of Cux1 transcripts was half of WT animals. Expression of CUX1 proteins was reduced, although in early postnatal animals significantly more than in adults. In summary, disease-causing CUX1 variants result in a non-syndromic phenotype of developmental delay and intellectual disability. In some individuals, this phenotype ameliorates with age, resulting in a clinical catch-up and normal IQ in adulthood. The post-transcriptional balance of CUX1 expression in the heterozygous brain at late developmental stages appears important for this favorable clinical course.CAG was supported by the Eunice Kennedy Shriver National Institute Of Child Health & Human Development of the National Institutes of Health under Award Number P50 HD103525. This work was funded by PID2020-112831GB-I00 AEI /10.13039/501100011033 (MN). SS was supported by a grant from the NIH/NINDS (K23NS119666). SWS is supported by the Hospital for Sick Children Foundation, Autism Speaks, and the University of Toronto McLaughlin Center. EM-G was supported by a grant from MICIU FPU18/06240. EVS. was supported by a grant from the NIH (EY025718). CRF was supported by the fund to support clinical research careers in the Region of Southern Denmark (Region Syddanmarks pulje for kliniske forskerkarriereforløb).Peer reviewe

Comprehensive lung injury pathology induced by mTOR inhibitors

Molecular Targets in Oncology[Abstract] Interstitial lung disease is a rare side effect of temsirolimus treatment in renal cancer patients. Pulmonary fibrosis is characterised by the accumulation of extracellular matrix collagen, fibroblast proliferation and migration, and loss of alveolar gas exchange units. Previous studies of pulmonary fibrosis have mainly focused on the fibro-proliferative process in the lungs. However, the molecular mechanism by which sirolimus promotes lung fibrosis remains elusive. Here, we propose an overall cascade hypothesis of interstitial lung diseases that represents a common, partly underlying synergism among them as well as the lung pathogenesis side effects of mammalian target of rapamycin inhibitors

Matter manipulation with extreme terahertz light: Progress in the enabling THz technology

Terahertz (THz) light has proven to be a fine tool to probe and control quasi-particles and collective excitations in solids, to drive phase transitions and associated changes in material properties, and to study rotations and vibrations in molecular systems. In contrast to visible light, which usually carries excessive photon energy for collective excitations in condensed matter systems, THz light allows for direct coupling to low-energy (meV scale) excitations of interest, The development of light sources of strong-field few-cycle THz pulses in the 2000s opened the door to controlled manipulation of reactions and processes. Such THz pulses can drive new dynamic states of matter, in which materials exhibit properties entirely different from that of the equilibrium. In this review, we first systematically analyze known studies on matter manipulation with strong-field few-cycle THz light and outline some anticipated new results. We focus on how properties of materials can be manipulated by driving the dynamics of different excitations and how molecules and particles can be controlled in useful ways by extreme THz light. Around 200 studies are examined, most of which were done during the last five years. Secondly, we discuss available and proposed sources of strong-field few-cycle THz pulses and their state-of-the-art operation parameters. Finally, we review current approaches to guiding, focusing, reshaping and diagnostics of THz pulses. (C) 2019 The Author(s). Published by Elsevier B.V

Frequently asked questions about chlorophyll fluorescence, the sequel

[EN] Using chlorophyll (Chl) a fluorescence many aspects of the photosynthetic apparatus can be studied, both in vitro and, noninvasively, in vivo. Complementary techniques can help to interpret changes in the Chl a fluorescence kinetics. Kalaji et al. (Photosynth Res 122: 121-158, 2014a) addressed several questions about instruments, methods and applications based on Chl a fluorescence. Here, additionalChl a fluorescence-related topics are discussed again in a question and answer format. Examples are the effect of connectivity on photochemical quenching, the correction of F-V/F-M values for PSI fluorescence, the energy partitioning concept, the interpretation of the complementary area, probing the donor side of PSII, the assignment of bands of 77 K fluorescence emission spectra to fluorescence emitters, the relationship between prompt and delayed fluorescence, potential problems when sampling tree canopies, the use of fluorescence parameters in QTL studies, the use of Chl a fluorescence in biosensor applications and the application of neural network approaches for the analysis of fluorescence measurements. The answers draw on knowledge fromdifferent Chl a fluorescence analysis domains, yielding in several cases new insights.Kalaji, H.; Schansker, G.; Brestic, M.; Bussotti, F.; Calatayud, A.; Ferroni, L.; Goltsev, V.... (2017). Frequently asked questions about chlorophyll fluorescence, the sequel. 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