Mobile genetic element excision footprints of Drosophila melanogaster found in heat shock protein coding regions of Solanaceous crops

Not AvailableMobile genetic elements are discrete sequences in the genome that are able to transport themselves to other locations within genome, which may have direct consequences on gene expression. More than 96 per cent of the transposable elements, occurring in heat shock promoters are P transposable element. In natural populations of Drosophila melanogaster, the promoters of heat-shock genes are especially susceptible to the insertion of transposable elements. These mobile elements often leave small rearrangements called transposon footprints at sites where they excise. It was proved that transposable elements insertion and subsequent excision resulted in the production of 8 bp direct repeats. The transposable elements often insert into the genes regulatory regions is due to their high expression level. In this context, Heat Shock Protein sequences, mainly HSP90 and HSP83 in Solanaceae crops were analysed for presence of transposable element excision footprints using in silico methods. It was found that out of the 17 hsp sequences, 14 hsp coding sequences were having 8 bp transposable element excision footprints consistently at the same location. These footprints left in individual sequences are surprisingly not random; excision footprints predominate consistently in each sequence. This suggests that the excision event and footprint formation involves DNA repair of hsp sequences flanking the transposable element. Identifying these footprints are useful for discovering genes that encodes for heat shock proteins in Solanaceae crops.Not Availabl

Local shell-to-shell energy transfer via nonlocal Interactions in fluid turbulence

In this paper we analytically compute the strength of nonlinear interactions in a triad, and the energy exchanges between wavenumber shells in incompressible fluid turbulence. The computation has been done using first-order perturbative field theory. In three dimension, magnitude of triad interactions is large for nonlocal triads, and small for local triads. However, the shell-to-shell energy transfer rate is found to be local and forward. This result is due to the fact that the nonlocal triads occupy much less Fourier space volume than the local ones. The analytical results on three-dimensional shell-to-shell energy transfer match with their numerical counterparts. In two-dimensional turbulence, the energy transfer rates to the near-by shells are forward, but to the distant shells are backward; the cumulative effect is an inverse cascade of energy.Comment: 10 pages, Revtex

Heart rate variability and target organ damage in hypertensive patients

Background: We evaluated the association between linear standard Heart Rate Variability (HRV) measures and vascular, renal and cardiac target organ damage (TOD). Methods: A retrospective analysis was performed including 200 patients registered in the Regione Campania network (aged 62.4 ± 12, male 64%). HRV analysis was performed by 24-h holter ECG. Renal damage was assessed by estimated glomerular filtration rate (eGFR), vascular damage by carotid intima-media thickness (IMT), and cardiac damage by left ventricular mass index. Results: Significantly lower values of the ratio of low to high frequency power (LF/HF) were found in the patients with moderate or severe eGFR (p-value < 0.001). Similarly, depressed values of indexes of the overall autonomic modulation on heart were found in patients with plaque compared to those with a normal IMT (p-value <0.05). These associations remained significant after adjustment for other factors known to contribute to the development of target organ damage, such as age. Moreover, depressed LF/HF was found also in patients with left ventricular hypertrophy but this association was not significant after adjustment for other factors. Conclusions: Depressed HRV appeared to be associated with vascular and renal TOD, suggesting the involvement of autonomic imbalance in the TOD. However, as the mechanisms by which abnormal autonomic balance may lead to TOD, and, particularly, to renal organ damage are not clearly known, further prospective studies with longitudinal design are needed to determine the association between HRV and the development of TOD

Whose responsibility is adolescent's mental health in the UK? The perspectives of key stakeholders

The mental health of adolescents is a salient contemporary issue attracting the attention of policy makers in the UK and other countries. It is important that the roles and responsibilities of agencies are clearly established, particularly those positioned at the forefront of implementing change. Arguably, this will be more efective if those agencies are actively engaged in the development of relevant policy. An exploratory study was conducted with 10 focus groups including 54 adolescents, 8 mental health practitioners and 16 educational professionals. Thematic analysis revealed four themes: (1) mental health promotion and prevention is not perceived to be a primary role of a teacher; (2) teachers have limited skills to manage complex mental health difculties; (3) adolescents rely on teachers for mental health support and education about mental health; and (4) the responsibility of parents for their children’s mental health. The research endorses the perspective that teachers can support and begin to tackle mental well-being in adolescents. However, it also recognises that mental health difculties can be complex, requiring adequate funding and support beyond school. Without this support in place, teachers are vulnerable and can feel unsupported, lacking in skills and resources which in turn may present a threat to their own mental well-being

New Trends in Same-Sex Sexual Contact for American Adolescents?

A new analysis of the U.S. National Survey of Family Growth (NSFG), comparing 2002 data to 2006-2008 data, found notable changes in teen girls’ sexual behavior. Seventeen-year-old girls in the later cohort were significantly less likely to have been heterosexually active (63% v. 46%) and more than twice as likely to have had same-sex contact (5% v. 11%). This group of teens was also more than three times as likely to have used emergency contraception (5% v. 17%) and less likely to have been pregnant (18% v. 12%).Additionally, the percentage of 17-year-old American girls who had ever been pregnant dropped significantly. Factors that may account for this drop include findings that more were waiting until later in adolescence to become heterosexually involved, more were using emergency contraception if they were heterosexually active, and more were engaging in same-sex behavior. Future research will help determine if this data constitutes a long-term trend.Findings were published in the Archives of Sexual Behavior, in a letter to the editor titled “New Trends in Same-Sex Contact for American Adolescents?” The study was conducted by Nanette Gartrell, MD, Henny Bos, PhD (University of Amsterdam), and Naomi Goldberg, MPP (a Fellow at the Williams Institute during the time that this work was done). Principal investigator Nanette Gartrell, MD, is a 2011-12 Williams Institute Visiting Distinguished Scholar and also affiliated with the University of Amsterdam

Towards transnational feminist queer methodologies

This article introduces the possibilities of transnational feminist queer research as seeking to conceptualise the transnational as a methodology composed of a series of flows that can augment feminist and queer research. Transnational feminist queer methodologies can contest long-standing configurations of power between researcher and researched, subject and object, academics and activists across places, typically those which are embedded in the hierarchies of the Global North/Global South. Beginning with charting our roots in, and routes through, the diverse arenas of transnational, feminist, participatory and queer methodologies, the article uses a transcribed and edited conversation between members of the Liveable Lives research team in Kolkata and Brighton, to start an exploration of transnational feminist queer methodologies. Understanding the difficult, yet constructive moments of collaborative work and dialogue, we argue for engagements with the multiplicities of ‘many-many' lives that recognise local specificities, and the complexities of lives within transnational research, avoiding creating a currency of comparison between places. We seek to work toward methodologies that take seriously the politics of place, namely by creating research that answers the same question in different places, using methods that are created in context and may not be ‘comparable'. Using a dialogue across the boundaries of activism/academia, as well as across geographical locations, the article contends that there are potentials, as well as challenges, in thinking ourselves through transnational research praxis. This seeks complexities and spatial nuances within as well as between places

Measuring (KSK +/-)-K-0 interactions using pp collisions at root s=7 TeV

We present the first measurements of femtoscopic correlations between the K-S(0) and K-+/- particles in pp collisions at root s = 7 TeV measured by the ALICE experiment. The observed femtoscopic correlations are consistent with final-state interactions proceeding solely via the a(0)(980) resonance. The extracted kaon source radius and correlation strength parameters for (KSK-)-K-0 are found to be equal within the experimental uncertainties to those for (KSK+)-K-0. Results of the present study are compared with those from identical-kaon femtoscopic studies also performed with pp collisions at root s = 7 TeV by ALICE and with a (KSK +/-)-K-0 measurement in Pb-Pb collisions at root s(NN) = 2.76 TeV. Combined with the Pb-Pb results, our pp analysis is found to be compatible with the interpretation of the a (980) having a tetraquark structure instead of that of a diquark. (C) 2018 Published by Elsevier B.V.Peer reviewe

Direct photon elliptic flow in Pb-Pb collisions at root s(NN)=2.76 TeV

The elliptic flow of inclusive and direct photons was measured at mid-rapidity in two centrality classes 0-20% and 20-40% in Pb-Pb collisions at root s(NN) = 2.76 TeV by ALICE. Photons were detected with the highly segmented electromagnetic calorimeter PHOS and via conversions in the detector material with the e(broken vertical bar)e pairs reconstructed in the central tracking system. The results of the two methods were combined and the direct-photon elliptic flow was extracted in the transverse momentum range 0.9 < p(T) < 6.2 GeV/c. A comparison to RHIC data shows a similar magnitude of the measured direct-photon elliptic flow. Hydrodynamic and transport model calculations are systematically lower than the data, but are found to be compatible. (C) 2018 The Author. Published by Elsevier B.V.Peer reviewe

Higher moment fluctuations of identified particle distributions from ALICE

Cumulants of conserved charges fluctuations are regarded as a potential tool to study the criticality in the QCD phase diagram and to determine the freeze-out parameters in a model-independent way. At LHC energies, the measurements of the ratio of the net-baryon (net-proton) cumulants can be used to test the lattice QCD predictions. In this work, we present the first measurements of cumulants of the net-proton number distributions up to $4^{th}$ order in Pb--Pb collisions at $\sqrt{s_{\mathrm{NN}}}$ = 2.76 and 5.02 TeV as a function of collision centrality. We compare our cumulant ratios results with the STAR experiment net-proton results measured in the first phase of the Beam Energy Scan program at RHIC. The results can be used to obtain the chemical freeze-out parameters at LHC.Comment: 4 pages, 3 figures, Proceedings of XXVIIth International Conference on Ultrarelativistic Nucleus-Nucleus Collisions (Quark Matter 2018