45 research outputs found
Developing a predictive modelling capacity for a climate change-vulnerable blanket bog habitat: Assessing 1961-1990 baseline relationships
Aim: Understanding the spatial distribution of high priority habitats and
developing predictive models using climate and environmental variables to
replicate these distributions are desirable conservation goals. The aim of this
study was to model and elucidate the contributions of climate and topography to
the distribution of a priority blanket bog habitat in Ireland, and to examine how
this might inform the development of a climate change predictive capacity for
peat-lands in Ireland.
Methods: Ten climatic and two topographic variables were recorded for grid
cells with a spatial resolution of 1010 km, covering 87% of the mainland
land surface of Ireland. Presence-absence data were matched to these variables
and generalised linear models (GLMs) fitted to identify the main climatic and
terrain predictor variables for occurrence of the habitat. Candidate predictor
variables were screened for collinearity, and the accuracy of the final fitted GLM
was evaluated using fourfold cross-validation based on the area under the curve
(AUC) derived from a receiver operating characteristic (ROC) plot. The GLM
predicted habitat occurrence probability maps were mapped against the actual
distributions using GIS techniques.
Results: Despite the apparent parsimony of the initial GLM using only climatic
variables, further testing indicated collinearity among temperature and precipitation
variables for example. Subsequent elimination of the collinear variables and
inclusion of elevation data produced an excellent performance based on the AUC
scores of the final GLM. Mean annual temperature and total mean annual
precipitation in combination with elevation range were the most powerful
explanatory variable group among those explored for the presence of blanket
bog habitat.
Main conclusions: The results confirm that this habitat distribution in general
can be modelled well using the non-collinear climatic and terrain variables tested
at the grid resolution used. Mapping the GLM-predicted distribution to the
observed distribution produced useful results in replicating the projected
occurrence of the habitat distribution over an extensive area. The methods
developed will usefully inform future climate change predictive modelling for
Irelan
Titan's cold case files - Outstanding questions after Cassini-Huygens
Abstract The entry of the Cassini-Huygens spacecraft into orbit around Saturn in July 2004 marked the start of a golden era in the exploration of Titan, Saturn's giant moon. During the Prime Mission (2004–2008), ground-breaking discoveries were made by the Cassini orbiter including the equatorial dune fields (flyby T3, 2005), northern lakes and seas (T16, 2006), and the large positive and negative ions (T16 & T18, 2006), to name a few. In 2005 the Huygens probe descended through Titan's atmosphere, taking the first close-up pictures of the surface, including large networks of dendritic channels leading to a dried-up seabed, and also obtaining detailed profiles of temperature and gas composition during the atmospheric descent. The discoveries continued through the Equinox Mission (2008–2010) and Solstice Mission (2010–2017) totaling 127 targeted flybys of Titan in all. Now at the end of the mission, we are able to look back on the high-level scientific questions from the start of the mission, and assess the progress that has been made towards answering these. At the same time, new scientific questions regarding Titan have emerged from the discoveries that have been made. In this paper we review a cross-section of important scientific questions that remain partially or completely unanswered, ranging from Titan's deep interior to the exosphere. Our intention is to help formulate the science goals for the next generation of planetary missions to Titan, and to stimulate new experimental, observational and theoretical investigations in the interim
AD51B in Familial Breast Cancer
Common variation on 14q24.1, close to RAD51B, has been associated with breast cancer: rs999737 and rs2588809 with the risk of female breast cancer and rs1314913 with the risk of male breast cancer. The aim of this study was to investigate the role of RAD51B variants in breast cancer predisposition, particularly in the context of familial breast cancer in Finland. We sequenced the coding region of RAD51B in 168 Finnish breast cancer patients from the Helsinki region for identification of possible recurrent founder mutations. In addition, we studied the known rs999737, rs2588809, and rs1314913 SNPs and RAD51B haplotypes in 44,791 breast cancer cases and 43,583 controls from 40 studies participating in the Breast Cancer Association Consortium (BCAC) that were genotyped on a custom chip (iCOGS). We identified one putatively pathogenic missense mutation c.541C>T among the Finnish cancer patients and subsequently genotyped the mutation in additional breast cancer cases (n = 5259) and population controls (n = 3586) from Finland and Belarus. No significant association with breast cancer risk was seen in the meta-analysis of the Finnish datasets or in the large BCAC dataset. The association with previously identified risk variants rs999737, rs2588809, and rs1314913 was replicated among all breast cancer cases and also among familial cases in the BCAC dataset. The most significant association was observed for the haplotype carrying the risk-alleles of all the three SNPs both among all cases (odds ratio (OR): 1.15, 95% confidence interval (CI): 1.11–1.19, P = 8.88 x 10−16) and among familial cases (OR: 1.24, 95% CI: 1.16–1.32, P = 6.19 x 10−11), compared to the haplotype with the respective protective alleles. Our results suggest that loss-of-function mutations in RAD51B are rare, but common variation at the RAD51B region is significantly associated with familial breast cancer risk
Student perceptions of a culturally diverse classroom environment
The research in the paper involves an application of the actual and preferred versions of a previously-validated learning environment instrument: the What is Happening in This Classroom (WIHIC) instrument in a complex multi-cultural university-level environment. Statistical analyses suggest the instrument is valid in this setting (with Cronbach alpha above 0.80 for all scales), and data analyses using ANOVA point to relatively few differences between preferred and actual environments. The research findings suggest all students would prefer a more interactive and equitable classroom, the latter issue of particular importance for one cohort, namely Indo-Fijians (descendents of ethnic Indian indentured labourers). With the exception of this, there are few differences based on ethnicity and further analysis also suggests no differences in perceptions vis- -vis collaborative versus competitive learning environments, excepting that analysis based on gender shows females have a slight preference for a more cooperative learning environment
A simple experiment to determine the activation energy of the viscous flow of polymer solutions using a glass capillary viscometer
A simple viscometry experiment undertaken by an undergraduate polymer class as a research project is described. Viscosity is a measure of a fluid's resistance to flow and is affected by several factors, such as concentration and temperature. In this experiment, the viscosities of polyvinylpyrrolidone solutions (a polymeric material) of different concentrations were prepared in water and measured at various temperatures. The solution viscosity was found to increase gradually with increasing concentration up to ~5 mass%, with a dramatic increase after this. The calculated viscosity of water at different temperatures was comparable to reported values. The activation energy of viscous flow (Ea) of the different solutions was calculated and followed a similar trend as that for the viscosities of solutions of various concentrations. This experiment allowed students to better understand and explain the behaviour of macromolecules with respect to changing concentration and temperature. Furthermore, students correlated the viscosity and Ea results to understand how an increase in the concentration of a polymer solution resulted in increased entanglement of the polymer chains, consequently leading to an increase in viscosity and an increase in the activation energy of viscous flow. This experiment is safe, low cost, simple and requires only readily available apparatus
Investigating first - year chemistry learning difficulties in the South Pacific: a case study from Fiji
The learning difficulties for new entrant chemistry students from a multi-national, regional, tertiary education institution in the South Pacific were investigated using a purpose-designed diagnostic instrument. The instrument contained 25 items distributed across three themes: scientific reasoning, numeracy and scientific language literacy. The research findings suggest that the main learning difficulty facing these students is in numeracy with students able to interpret numerical data presented in graphical form and to complete rudimentary numerical calculations, but unable to use numerical data or perform calculations involving ratios. Targeted remedial tutoring, based on the results of this diagnostic test instrument, rather than content-driven extra tutorials, are suggested for remediation of learning difficulties