38 research outputs found
Consumption of aspartame and other artificial sweeteners and risk of cancer in the Spanish multicase‐control study (MCC‐Spain)
Use of artificial sweeteners (AS) such as aspartame, cyclamate, saccharin and sucralose is widespread. We evaluated the association of use of aspartame and other AS with cancer. In total 1881 colorectal, 1510 breast, 972 prostate and 351 stomach cancer and 109 chronic lymphocytic leukaemia (CLL) cases and 3629 population controls from the Spanish Multicase-Control (MCC-Spain) study were recruited (2008-2013). The consumption of AS, from table-top sweeteners and artificially sweetened beverages, was assessed through a self-administered and validated food frequency questionnaire (FFQ). Sex-specific quartiles among controls were determined to compare moderate consumers ( third quartile) vs non consumers (reference category), distinguishing aspartame-containing products and other AS. Unconditional logistic regression models were used to estimate adjusted OR and 95%CI, and results were stratified by diabetes status. Overall, we found no associations between the consumption of aspartame or other AS and cancer. Among participants with diabetes, high consumption of other AS was associated with colorectal cancer (OR=1.58, 95% CI 1.05-2.41, P trend=.03) and stomach cancer (OR=2.27 [0.99-5.44], P trend=.06). High consumption of aspartame, was associated with stomach cancer (OR=2.04 [0.7-5.4], P trend=.05), while a lower risk was observed for breast cancer (OR=0.28 [0.08-0.83], P trend=.03). In some cancers, the number of cases in participants with diabetes were small and results should be interpreted cautiously. We did not find associations between use of AS and cancer, but found associations between high consumption of aspartame and other AS and different cancer types among participants with diabetes
Genetic Variation in the TP53 Pathway and Bladder Cancer Risk. A Comprehensive Analysis
Introduction: Germline variants in TP63 have been consistently associated with several tumors, including bladder cancer,
indicating the importance of TP53 pathway in cancer genetic susceptibility. However, variants in other related genes,
including TP53 rs1042522 (Arg72Pro), still present controversial results. We carried out an in depth assessment of
associations between common germline variants in the TP53 pathway and bladder cancer risk.
Material and Methods: We investigated 184 tagSNPs from 18 genes in 1,058 cases and 1,138 controls from the Spanish
Bladder Cancer/EPICURO Study. Cases were newly-diagnosed bladder cancer patients during 1998–2001. Hospital controls
were age-gender, and area matched to cases. SNPs were genotyped in blood DNA using Illumina Golden Gate and TaqMan
assays. Cases were subphenotyped according to stage/grade and tumor p53 expression. We applied classical tests to assess
individual SNP associations and the Least Absolute Shrinkage and Selection Operator (LASSO)-penalized logistic regression
analysis to assess multiple SNPs simultaneously.
Results: Based on classical analyses, SNPs in BAK1 (1), IGF1R (5), P53AIP1 (1), PMAIP1 (2), SERINPB5 (3), TP63 (3), and TP73 (1)
showed significant associations at p-value#0.05. However, no evidence of association, either with overall risk or with
specific disease subtypes, was observed after correction for multiple testing (p-value$0.8). LASSO selected the SNP
rs6567355 in SERPINB5 with 83% of reproducibility. This SNP provided an OR = 1.21, 95%CI 1.05–1.38, p-value = 0.006, and a
corrected p-value = 0.5 when controlling for over-estimation.
Discussion: We found no strong evidence that common variants in the TP53 pathway are associated with bladder cancer
susceptibility. Our study suggests that it is unlikely that TP53 Arg72Pro is implicated in the UCB in white Europeans.
SERPINB5 and TP63 variation deserve further exploration in extended studies.This work was supported by the Fondo de Investigacion Sanitaria, Spain (grant numbers 00/0745, PI051436, PI061614, G03/174); Red Tematica de Investigacion Cooperativa en Cancer (grant number RD06/0020-RTICC), Spain; Marato TV3 (grant number 050830); European Commission (grant numbers EU-FP7-HEALTH-F2-2008-201663-UROMOL; US National Institutes of Health (grant number USA-NIH-RO1-CA089715); and the Intramural Research Program of the Division of Cancer Epidemiology and Genetics, National Cancer Institute at the National Institutes of Health, USA; Consolider ONCOBIO (Ministerio de Economia y Competitividad, Madrid, Spain). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript
SARS-CoV-2 Breakthrough Infections: Incidence and Risk Factors in a Large European Multicentric Cohort of Health Workers
The research aimed to investigate the incidence of SARS-CoV-2 breakthrough infections and their determinants in a large European cohort of more than 60,000 health workers
Application of Multi-SNP Approaches Bayesian LASSO and AUC-RF to Detect Main Effects of Inflammatory-Gene Variants Associated with Bladder Cancer Risk
The relationship between inflammation and cancer is well established in several tumor types, including bladder cancer. We
performed an association study between 886 inflammatory-gene variants and bladder cancer risk in 1,047 cases and 988
controls from the Spanish Bladder Cancer (SBC)/EPICURO Study. A preliminary exploration with the widely used univariate
logistic regression approach did not identify any significant SNP after correcting for multiple testing. We further applied two
more comprehensive methods to capture the complexity of bladder cancer genetic susceptibility: Bayesian Threshold
LASSO (BTL), a regularized regression method, and AUC-Random Forest, a machine-learning algorithm. Both approaches
explore the joint effect of markers. BTL analysis identified a signature of 37 SNPs in 34 genes showing an association with
bladder cancer. AUC-RF detected an optimal predictive subset of 56 SNPs. 13 SNPs were identified by both methods in the
total population. Using resources from the Texas Bladder Cancer study we were able to replicate 30% of the SNPs assessed.
The associations between inflammatory SNPs and bladder cancer were reexamined among non-smokers to eliminate the
effect of tobacco, one of the strongest and most prevalent environmental risk factor for this tumor. A 9 SNP-signature was
detected by BTL. Here we report, for the first time, a set of SNP in inflammatory genes jointly associated with bladder cancer
risk. These results highlight the importance of the complex structure of genetic susceptibility associated with cancer risk.The work was partially supported by the Fondo de Investigacion Sanitaria, Instituto de Salud Carlos III (G03/174, 00/0745, PI051436, PI061614, PI09-02102, G03/174 and Sara Borrell fellowship to ELM) and Ministry of Science and Innovation (MTM2008-06747-C02-02 and FPU fellowship award to VU), Spain; AGAUR-Generalitat de Catalunya (Grant 2009SGR-581); Fundaciola Maratode TV3; Red Tematica de Investigacion Cooperativa en Cancer (RTICC); Asociacion Espanola Contra el Cancer (AECC); EU-FP7-201663; and RO1-CA089715 and CA34627; the Spanish National Institute for Bioinformatics (www.inab.org); and by the Intramural Research Program of the Division of Cancer Epidemiology and Genetics, National Cancer Institute, USA. MD Anderson support for this project included U01 CA 127615 (XW); R01 CA 74880 (XW); P50 CA 91846 (XW, CPD); Betty B. Marcus Chair fund in Cancer Prevention (XW); UT Research Trust fund (XW) and R01 CA 131335 (JG)
Shared heritability and functional enrichment across six solid cancers
Correction: Nature Communications 10 (2019): art. 4386 DOI: 10.1038/s41467-019-12095-8Quantifying the genetic correlation between cancers can provide important insights into the mechanisms driving cancer etiology. Using genome-wide association study summary statistics across six cancer types based on a total of 296,215 cases and 301,319 controls of European ancestry, here we estimate the pair-wise genetic correlations between breast, colorectal, head/neck, lung, ovary and prostate cancer, and between cancers and 38 other diseases. We observed statistically significant genetic correlations between lung and head/neck cancer (r(g) = 0.57, p = 4.6 x 10(-8)), breast and ovarian cancer (r(g) = 0.24, p = 7 x 10(-5)), breast and lung cancer (r(g) = 0.18, p = 1.5 x 10(-6)) and breast and colorectal cancer (r(g) = 0.15, p = 1.1 x 10(-4)). We also found that multiple cancers are genetically correlated with non-cancer traits including smoking, psychiatric diseases and metabolic characteristics. Functional enrichment analysis revealed a significant excess contribution of conserved and regulatory regions to cancer heritability. Our comprehensive analysis of cross-cancer heritability suggests that solid tumors arising across tissues share in part a common germline genetic basis.Peer reviewe
Shared heritability and functional enrichment across six solid cancers
Quantifying the genetic correlation between cancers can provide important insights into the mechanisms driving cancer etiology. Using genome-wide association study summary statistics across six cancer types based on a total of 296,215 cases and 301,319 controls of European ancestry, here we estimate the pair-wise genetic correlations between breast, colorectal, head/neck, lung, ovary and prostate cancer, and between cancers and 38 other diseases. We observed statistically significant genetic correlations between lung and head/neck cancer (r(g) = 0.57, p = 4.6 x 10(-8)), breast and ovarian cancer (r(g) = 0.24, p = 7 x 10(-5)), breast and lung cancer (r(g) = 0.18, p = 1.5 x 10(-6)) and breast and colorectal cancer (r(g) = 0.15, p = 1.1 x 10(-4)). We also found that multiple cancers are genetically correlated with non-cancer traits including smoking, psychiatric diseases and metabolic characteristics. Functional enrichment analysis revealed a significant excess contribution of conserved and regulatory regions to cancer heritability. Our comprehensive analysis of cross-cancer heritability suggests that solid tumors arising across tissues share in part a common germline genetic basis
Architecture of new technological worlds on the example of IT-parks
The article considers IT-parks as examples of the implementation of new technological worlds of the information post-COVID period on the example of large international and domestic IT companies. Modern trends and general principles of creating office spaces for IT organizations are revealed from the point of view of the influence of the environment on the physical, psychological and emotional well-being of employees. The study identified seven main trends: a healthy work environment, biophilic design, transformable spaces, hybrid workplaces, sustainable workplaces, contactless technologies, a unique interior that tells the story of the company. These trends were further implemented in the design: in the experimental graduation project of the IT-park in Samara and in the implemented building of the IT-park in Samara
Realization of smart city concept through media technology in architecture and urban space: from utopia to reality
This article describes the realization of smart city concept in architectural and urban media spaces. Considerable attention is paid to studying the influence of some parameters of the “smart city”, such as adaptability, mobility, intellectualization, sustainability, security and some others. The article also analyses the elements of utopianism and realism in the application of high technologies in urban reality. The connection is studied between utopian models of ideal city and realized strategy of smart urban development, in which the integration of digital technologies leads to the formation of high-hume communicative space that serves as the locomotive of global changes. The study also identifies four theoretical models of media space and classification of urban screens according to compositional-planning implementation methods. As a result of the research, a hypothesis is suggested that there are some key factors and conditions furthering the implementation of the “smart city” concept, as exemplified by the creation of media spaces in urban environment. In addition, a conclusion is made about the prospects of using media technologies in the city on the example of Samara
Realization of smart city concept through media technology in architecture and urban space: from utopia to reality
This article describes the realization of smart city concept in architectural and urban media spaces. Considerable attention is paid to studying the influence of some parameters of the “smart city”, such as adaptability, mobility, intellectualization, sustainability, security and some others. The article also analyses the elements of utopianism and realism in the application of high technologies in urban reality. The connection is studied between utopian models of ideal city and realized strategy of smart urban development, in which the integration of digital technologies leads to the formation of high-hume communicative space that serves as the locomotive of global changes. The study also identifies four theoretical models of media space and classification of urban screens according to compositional-planning implementation methods. As a result of the research, a hypothesis is suggested that there are some key factors and conditions furthering the implementation of the “smart city” concept, as exemplified by the creation of media spaces in urban environment. In addition, a conclusion is made about the prospects of using media technologies in the city on the example of Samara