On the structure of the directions not determined by a large affine point set

Given a point set $U$ in an $n$-dimensional affine space of size $q^{n-1}-\varepsilon$, we obtain information on the structure of the set of directions that are not determined by $U$, and we describe an application in the theory of partial ovoids of certain partial geometries

Native Desorption Electrospray Ionization Liberates Soluble and Membrane Protein Complexes from Surfaces

Mass spectrometry (MS) applications for intact protein complexes typically require electrospray (ES) ionization and have not been achieved via direct desorption from surfaces. Desorption ES ionization (DESI) MS has however transformed the study of tissue surfaces through release and characterisation of small molecules. Motivated by the desire to screen for ligand binding to intact protein complexes we report the development of a native DESI platform. By establishing conditions that preserve non‐covalent interactions we exploit the surface to capture a rapid turnover enzyme–substrate complex and to optimise detergents for membrane protein study. We demonstrate binding of lipids and drugs to membrane proteins deposited on surfaces and selectivity from a mix of related agonists for specific binding to a GPCR. Overall therefore we introduce this native DESI platform with the potential for high‐throughput ligand screening of some of the most challenging drug targets including GPCRs

The death of massive stars - I. Observational constraints on the progenitors of type II-P supernovae

We present the results of a 10.5 yr, volume limited (28 Mpc) search for supernova (SN) progenitor stars. We compile all SNe discovered within this volume (132, of which 27% are type Ia) and determine the relative rates of each sub-type from literature studies : II-P (59%), Ib/c (29%), IIb (5%), IIn (4%) and II-L (3%). Twenty II-P SNe have high quality optical or near-IR pre-explosion images that allow a meaningful search for the progenitor stars. In five cases they are clearly red supergiants, one case is unconstrained, two fall on compact coeval star clusters and the other twelve have no progenitor detected. We review and update all the available data for the host galaxies (distance, metallicity and extinction) and determine masses and upper mass estimates using the STARS stellar evolutionary code and a single consistent homogeneous method. A maximum likelihood calculation suggests that the minimum stellar mass for a type II-P to form is m(min)=8.5 +1/-1.5 Msol and the maximum mass for II-P progenitors is m(max)=16.5 +/- 1.5 Msol, assuming a Salpeter initial mass function (in the range Gamma = -1.35 +0.3/-0.7). The minimum mass is consistent with current estimates for white dwarf progenitor masses, but the maximum mass does not appear consistent with massive star populations. Red supergiants in the Local Group have masses up to 25Msol and the minimum mass to produce a Wolf-Rayet star in single star evolution (between solar and LMC metallicity) is similarly 25-30 Msol. We term this discrepancy the "red supergiant problem" and speculate that these stars could have core masses high enough to form black holes and SNe which are too faint to have been detected. Low luminosity SNe with low 56Ni production seem to arise from explosions of low mass progenitors near the mass threshold for core-collapse. (abridged).Comment: 37 pages, 9 figs, accepted for publication in MNRA

A conserved myotubularin-related phosphatase regulates autophagy by maintaining autophagic flux

Macroautophagy (autophagy) targets cytoplasmic cargoes to the lysosome for degradation. Like all vesicle trafficking, autophagy relies on phosphoinositide identity, concentration, and localization to execute multiple steps in this catabolic process. Here, we screen for phosphoinositide phosphatases that influence autophagy in Drosophila and identify CG3530. CG3530 is homologous to the human MTMR6 subfamily of myotubularin-related 3-phosphatases, and therefore, we named it dMtmr6. dMtmr6, which is required for development and viability in Drosophila, functions as a regulator of autophagic flux in multiple Drosophila cell types. The MTMR6 family member MTMR8 has a similar function in autophagy of higher animal cells. Decreased dMtmr6 and MTMR8 function results in autophagic vesicle accumulation and influences endolysosomal homeostasis

SN 2005cs in M51 II. Complete Evolution in the Optical and the Near-Infrared

We present the results of the one year long observational campaign of the type II-plateau SN 2005cs, which exploded in the nearby spiral galaxy M51 (the Whirlpool Galaxy). This extensive dataset makes SN 2005cs the best observed low-luminosity, 56Ni-poor type II-plateau event so far and one of the best core-collapse supernovae ever. The optical and near-infrared spectra show narrow P-Cygni lines characteristic of this SN family, which are indicative of a very low expansion velocity (about 1000 km/s) of the ejected material. The optical light curves cover both the plateau phase and the late-time radioactive tail, until about 380 days after core-collapse. Numerous unfiltered observations obtained by amateur astronomers give us the rare opportunity to monitor the fast rise to maximum light, lasting about 2 days. In addition to optical observations, we also present near-infrared light curves that (together with already published UV observations) allow us to construct for the first time a reliable bolometric light curve for an object of this class. Finally, comparing the observed data with those derived from a semi-analytic model, we infer for SN 2005cs a 56Ni mass of about 0.003 solar masses, a total ejected mass of 8-13 solar masses and an explosion energy of about 3 x 10^50 erg.Comment: 18 pages, 18 figures, accepted for publication in MNRA