Larval description and chaetotaxic analysis of dineutus sinuosipennis laporte, 1840, with a key for the identification of larvae of the tribe Dineutini (Coleoptera, Gyrinidae)

The larvae of the Malagasy whirligig beetle Dineutus sinuosipennis Laporte, 1840, identified using DNA sequence data, are described and illustrated for the first time, including detailed morphometric and chaetotaxic analyses of selected structures and a description of larval habitat. Larvae of the genus Dineutus Macleay, 1825 are diagnosed, and a key to identify the genera of the tribe Dineutini is presented. Larvae of Dineutus exhibit the characters traditionally recognized as autapomorphies of the Gyrinidae: body less sclerotized, egg bursters located on the parietal, one additional sensorial plate on the third antennomere, cardo and lacinia well developed, prementum completely divided, abdominal tracheal gills, and four terminal hooks on the pygopod. They also share with larvae of the other Dineutini genera these putative synapomorphies: numerous minute pore-like additional structures on the ultimate maxillary and labial palpomeres, coxal primary seta CO12 inserted submedially, and trochanteral primary seta TR2 absent. Larvae of Dineutus can be distinguished from those of other known genera of Dineutini by the posterior margin of the lacinia not dentate, tracheal gills plumose, parietal seta PA5 inserted relatively far from setae PA7–9, mandibular pores MNb and MNc inserted relatively far from each other, and tarsal seta TA1 inserted submedially.Fil: Michat, Mariano Cruz. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Biodiversidad y Biología Experimental y Aplicada. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Biodiversidad y Biología Experimental y Aplicada; ArgentinaFil: Gustafson, Grey T.. University of Kansas; Estados UnidosFil: Bergsten, Johannes. Swedish Museum Of Natural History; Sueci

Diversification in the Comoros: Review of the Laccophilus alluaudi Species Group with the Description of Four New Species (Coleoptera: Dytiscidae)

The Laccophilus alluaudi species group is an interesting case of an endemic species radiation of Madagascar and the Comoros. To date, a single species, Laccophilus tigrinus Guignot, 1959 (Anjouan), is known from the Comoro Islands, with eight other species known from Madagascar. Here we review the Laccophilus alluaudi species group from the Comoro Islands based on partly new material. We recognize five species, out of which four are here described as new: L. mohelicus n. sp. (Mohéli), L. denticulatus n. sp. (Grande Comore), L. michaelbalkei n. sp. (Mayotte) and L. mayottei n. sp. (Mayotte). Based on morphology of male genitalia, we hypothesize that the five species form a monophyletic group and originated from a single colonization event from Madagascar. If confirmed, this would constitute one of the few examples of intra-archipelago diversification in the Comoros. The knowledge of species limits in relation to their distribution in the Comoros archipelago is also urgently needed in the face of rapid habitat degradation

Diversification in the Comoros: Review of the Laccophilus alluaudi Species Group with the Description of Four New Species (Coleoptera: Dytiscidae)

The Laccophilus alluaudi species group is an interesting case of an endemic species radiation of Madagascar and the Comoros. To date, a single species, Laccophilus tigrinus Guignot, 1959 (Anjouan), is known from the Comoro Islands, with eight other species known from Madagascar. Here we review the Laccophilus alluaudi species group from the Comoro Islands based on partly new material. We recognize five species, out of which four are here described as new: L. mohelicus n. sp. (Mohéli), L. denticulatus n. sp. (Grande Comore), L. michaelbalkei n. sp. (Mayotte) and L. mayottei n. sp. (Mayotte). Based on morphology of male genitalia, we hypothesize that the five species form a monophyletic group and originated from a single colonization event from Madagascar. If confirmed, this would constitute one of the few examples of intra-archipelago diversification in the Comoros. The knowledge of species limits in relation to their distribution in the Comoros archipelago is also urgently needed in the face of rapid habitat degradation

Phylogeny of Diving Beetles Reveals a Coevolutionary Arms Race between the Sexes

BACKGROUND: Darwin illustrated his sexual selection theory with male and female morphology of diving beetles, but maintained a cooperative view of their interaction. Present theory suggests that instead sexual conflict should be a widespread evolutionary force driving both intersexual coevolutionary arms races and speciation. METHODOLOGY/PRINCIPAL FINDINGS: We combined Bayesian phylogenetics, complete taxon sampling and a multi-gene approach to test the arms race scenario on a robust diving beetle phylogeny. As predicted, suction cups in males and modified dorsal surfaces in females showed a pronounced coevolutionary pattern. The female dorsal modifications impair the attachment ability of male suction cups, but each antagonistic novelty in females corresponds to counter-differentiation of suction cups in males. CONCLUSIONS: A recently diverged sibling species pair in Japan is possibly one consequence of this arms race and we suggest that future studies on hypoxia might reveal the key to the extraordinary selection for female counter-adaptations in diving beetles

Completing Linnaeus's inventory of the Swedish insect fauna: Only 5,000 species left?

Despite more than 250 years of taxonomic research, we still have only a vague idea about the true size and composition of the faunas and floras of the planet. Many biodiversity inventories provide limited insight because they focus on a small taxonomic subsample or a tiny geographic area. Here, we report on the size and composition of the Swedish insect fauna, thought to represent roughly half of the diversity of multicellular life in one of the largest European countries. Our results are based on more than a decade of data from the Swedish Taxonomy Initiative and its massive inventory of the country's insect fauna, the Swedish Malaise Trap Project The fauna is considered one of the best known in the world, but the initiative has nevertheless revealed a surprising amount of hidden diversity: more than 3,000 new species (301 new to science) have been documented so far. Here, we use three independent methods to analyze the true size and composition of the fauna at the family or subfamily level: (1) assessments by experts who have been working on the most poorly known groups in the fauna; (2) estimates based on the proportion of new species discovered in the Malaise trap inventory; and (3) extrapolations based on species abundance and incidence data from the inventory. For the last method, we develop a new estimator, the combined non-parametric estimator, which we show is less sensitive to poor coverage of the species pool than other popular estimators. The three methods converge on similar estimates of the size and composition of the fauna, suggesting that it comprises around 33,000 species. Of those, 8,600 (26%) were unknown at the start of the inventory and 5,000 (15%) still await discovery. We analyze the taxonomic and ecological composition of the estimated fauna, and show that most of the new species belong to Hymenoptera and Diptera groups that are decomposers or parasitoids. Thus, current knowledge of the Swedish insect fauna is strongly biased taxonomically and ecologically, and we show that similar but even stronger biases have distorted our understanding of the fauna in the past. We analyze latitudinal gradients in the size and composition of known European insect faunas and show that several of the patterns contradict the Swedish data, presumably due to similar knowledge biases. Addressing these biases is critical in understanding insect biomes and the ecosystem services they provide. Our results emphasize the need to broaden the taxonomic scope of current insect monitoring efforts, a task that is all the more urgent as recent studies indicate a possible worldwide decline in insect faunas

The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics.

ABSTRACT: A global genome database of all of Earth’s species diversity could be a treasure trove of scientific discoveries. However, regardless of the major advances in genome sequencing technologies, only a tiny fraction of species have genomic information available. To contribute to a more complete planetary genomic database, scientists and institutions across the world have united under the Earth BioGenome Project (EBP), which plans to sequence and assemble high-quality reference genomes for all ∼1.5 million recognized eukaryotic species through a stepwise phased approach. As the initiative transitions into Phase II, where 150,000 species are to be sequenced in just four years, worldwide participation in the project will be fundamental to success. As the European node of the EBP, the European Reference Genome Atlas (ERGA) seeks to implement a new decentralised, accessible, equitable and inclusive model for producing high-quality reference genomes, which will inform EBP as it scales. To embark on this mission, ERGA launched a Pilot Project to establish a network across Europe to develop and test the first infrastructure of its kind for the coordinated and distributed reference genome production on 98 European eukaryotic species from sample providers across 33 European countries. Here we outline the process and challenges faced during the development of a pilot infrastructure for the production of reference genome resources, and explore the effectiveness of this approach in terms of high-quality reference genome production, considering also equity and inclusion. The outcomes and lessons learned during this pilot provide a solid foundation for ERGA while offering key learnings to other transnational and national genomic resource projects.info:eu-repo/semantics/publishedVersio

Search for dark matter produced in association with bottom or top quarks in √s = 13 TeV pp collisions with the ATLAS detector

A search for weakly interacting massive particle dark matter produced in association with bottom or top quarks is presented. Final states containing third-generation quarks and miss- ing transverse momentum are considered. The analysis uses 36.1 fb−1 of proton–proton collision data recorded by the ATLAS experiment at √s = 13 TeV in 2015 and 2016. No significant excess of events above the estimated backgrounds is observed. The results are in- terpreted in the framework of simplified models of spin-0 dark-matter mediators. For colour- neutral spin-0 mediators produced in association with top quarks and decaying into a pair of dark-matter particles, mediator masses below 50 GeV are excluded assuming a dark-matter candidate mass of 1 GeV and unitary couplings. For scalar and pseudoscalar mediators produced in association with bottom quarks, the search sets limits on the production cross- section of 300 times the predicted rate for mediators with masses between 10 and 50 GeV and assuming a dark-matter mass of 1 GeV and unitary coupling. Constraints on colour- charged scalar simplified models are also presented. Assuming a dark-matter particle mass of 35 GeV, mediator particles with mass below 1.1 TeV are excluded for couplings yielding a dark-matter relic density consistent with measurements

Taxonomy, phylogeny, and secondary sexual character evolution of diving beetles, focusing on the genus Acilius

Sexual conflict can lead to antagonistic coevolution between the sexes, but empirical examples are few. In this thesis secondary sexual characters in diving beetles are interpreted in the light of sexual conflict theory. Whether the male tarsal suction cups and female dorsal modifications are involved in a coevolutionary arms race is tested in two ways. First eight populations of a species with dimorphic females that varied in frequency of the morphs were investigated and male tarsal characteristics quantified. The frequency of female morphs is shown to be significantly correlated to the average number and size of male tarsal suction cups in the population, a prediction of the arms race hypothesis. Second, the hypothesis is tested in a phylogenetic perspective by optimizing the secondary sexual characters on a phylogeny. A full taxonomic revision of the genus Acilius is presented, including new synonyms, lectotype designations, geographic distributions based on more than five thousand examined museum specimens and the description of a new species from northeastern USA. Specimens of all species (except one possibly extinct that failed to be found in Yunnan, China 2000), were field collected between 2000 and 2003 in Sardinia, Sweden, Russia, Honshu and Hokkaido in Japan, New York, Maryland, California and Alberta. Three genes (CO1, H3 and Wingless) were sequenced from the fresh material as well as scoring a morphological character matrix all of which was used to derive a robust and complete hypothesis of the phylogenetic relationship in the group. The phylogeny was derived using Bayesian phylogenetics with Markov Chain Monte Carlo techniques and received a posterior probability of 0.85. Changes in male and female characters turned out to be perfectly correlated across the phylogeny, providing one of the best empirical examples to date of an antagonistic arms race between the sexes in a group of organisms. Finally, a review of a pitfall to phylogenetic analysis known under the name long-branch attraction (LBA), is provided. The problem is well known theoretically but has been questioned to occur in real data, and LBA has been in the core center of the hard debate between parsimony and likelihood advocates since different inference methods vary in sensitivity to the phenomenon. Most important conclusions from the review are; LBA is very common in real data, and is most often introduced with the inclusion of outgroups that almost always provide long branches, pulling down long terminal ingroup branches towards the root. Therefore it is recommended to always run analyses with and without outgroups. Taxon sampling is very important to avoid the pitfall as well as including different kind of data, especially morphological data, i.e. many LBA-affected conclusions have recently been reached by analyses of few taxa with complete genomes. Long-branch extraction (incl. outgroup exclusion), methodological disconcordance (parsimony vs modelbased), separate partition analyses (morphology vs molecules, codon positions, genes, etc), parametric simulation (incl. random outgroups), and split graphs are available relevant methods for the detection of LBA that should be used in combinations, because none alone is enough to stipulate LBA