Varying levels of clonality and ploidy create barriers to gene flow and challenges for conservation of an Australian arid-zone ecosystem engineer, Acacia loderi

Acacia loderi, the ecosystem engineer of the endangered Acacia loderi Shrublands in arid eastern Australia, spans a persistent (\u3e 15 000 year) but poorly studied landscape feature, the Darling River. We investigated the genetic structure of 19 stands of eight to \u3e 1000 plants separated by \u3c 300 km to test for variation in life histories between semi-arid and arid stands to the east and west of the Darling River, respectively. Eight of nine stands east of the Darling were exclusively sexual, whereas most of those to the west were clonal. Three western stands were monoclonal, two were polyploid, and one was a diverse mix of diploid and triploid phenotypes. Bayesian analysis revealed a complex genetic structure within the western stands, whereas the eastern stands formed only two genetic clusters. Conservation of small stands may require augmentation of genotypic diversity. However, most genotypic diversity resides within the eastern stands. Although arid zone stands of A. loderi are not always clonal, clonality and polyploidy are more common in the arid west. Clear demarcation of life histories either side of the Darling River may reflect ancient or contemporary effects of physical disturbance associated with the river channel, or cryptic environmental differences, with sexual and asexual reproduction, respectively, at a selective premium in the semi-arid east and arid west. The restricted distribution of clones and variation in clonality and polyploidy suggests that smaller stands may be vulnerable and warrant individual management

Patterns of demography for rocky-shore, intertidal invertebrates approaching their geographical range limits: tests of the abundant-centre hypothesis in south-eastern Australia

The abundant-centre hypothesis predicts that species\u27 abundances peak at the centre of their geographical ranges and decline gradually towards their range limits. We tested predictions of this hypothesis for three rocky-shore, intertidal invertebrates with planktonic larvae (the whelk, Morula marginalba, the snail, Afrolittorina pyramidalis, and the barnacle, Tesseropora rosea) by quantifying their patterns of abundance and size, and inferring pulses of recruitment from size-frequency distributions, at multiple spatial scales spanning a 600-km region in south-eastern Australia and encompassing roughly the southern third of their geographical ranges. At the regional scale, abundances for all species were, as predicted, dramatically lower at their range limits. This decline was not gradual, however, because there were large variations in abundance at smaller spatial scales, and abrupt declines at the south-eastern corner of Australia. Size did not change towards the range limit for any species, but size-frequency distributions suggested a decline in the frequency of recruitment events at the range limit for T. rosea. We conclude that the abundant-centre hypothesis is not an appropriate model for abundance distributions of benthic marine invertebrates with planktonic larvae, because of the vagaries of dispersal and recruitment interacting with complex current patterns along non-uniform coastlines

Using supply chain data to monitor zero deforestation commitments: an assessment of progress in the Brazilian soy sector

Zero deforestation commitments (ZDCs) are voluntary initiatives where companies or countries pledge to eliminate deforestation from their supply chains. These commitments offer much promise for sustainable commodity production, but are undermined by a lack of transparency about their coverage and impacts. Here, using state-of-the-art supply chain data, we introduce an approach to evaluate the impact of ZDCs, linking traders and international markets to commodity-associated deforestation in the sub-national jurisdictions from which they source. We focus on the Brazilian soy sector, where we find that ZDC coverage is increasing, but under-represents the Cerrado biome where most soy-associated deforestation currently takes place. Though soy-associated deforestation declined in the Amazon after the introduction of the Soy Moratorium, we observe no change in the exposure of companies or countries adopting ZDCs to soy-associated deforestation in the Cerrado. We further assess the formulation and implementation of these ZDCs and identify several systematic weaknesses that must be addressed to increase the likelihood that they achieve meaningful reductions in deforestation in future. As the 2020 deadline for several of these commitments approaches, our approach can provide independent monitoring of progress toward the goal of ending commodity-associated deforestation

Some Rare Indo-Pacific Coral Species Are Probable Hybrids

Background: coral reefs worldwide face a variety of threats and many coral species are increasingly endangered. It is often assumed that rare coral species face higher risks of extinction because they have very small effective population sizes, a predicted consequence of which is decreased genetic diversity and adaptive potential.\ud \ud Methodology/Principal Findings: here we show that some Indo-Pacific members of the coral genus Acropora have very small global population sizes and are likely to be unidirectional hybrids. Whether this reflects hybrid origins or secondary hybridization following speciation is unclear.\ud \ud Conclusions/Significance: the interspecific gene flow demonstrated here implies increased genetic diversity and adaptive potential in these coral species. Rare Acropora species may therefore be less vulnerable to extinction than has often been assumed because of their propensity for hybridization and introgression, which may increase their adaptive potential

Geminivirus-Mediated Delivery of Florigen Promotes Determinate Growth in Aerial Organs and Uncouples Flowering from Photoperiod in Cotton

This article discusses geminivirus-mediated delivery of florigen. Florigen acts as a general growth hormone, advancing determinate growth. The findings extend our understanding of florigen as a general growth hormone and could benefit crop management techniques

Minimal information for studies of extracellular vesicles 2018 (MISEV2018):a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

The last decade has seen a sharp increase in the number of scientific publications describing physiological and pathological functions of extracellular vesicles (EVs), a collective term covering various subtypes of cell-released, membranous structures, called exosomes, microvesicles, microparticles, ectosomes, oncosomes, apoptotic bodies, and many other names. However, specific issues arise when working with these entities, whose size and amount often make them difficult to obtain as relatively pure preparations, and to characterize properly. The International Society for Extracellular Vesicles (ISEV) proposed Minimal Information for Studies of Extracellular Vesicles (“MISEV”) guidelines for the field in 2014. We now update these “MISEV2014” guidelines based on evolution of the collective knowledge in the last four years. An important point to consider is that ascribing a specific function to EVs in general, or to subtypes of EVs, requires reporting of specific information beyond mere description of function in a crude, potentially contaminated, and heterogeneous preparation. For example, claims that exosomes are endowed with exquisite and specific activities remain difficult to support experimentally, given our still limited knowledge of their specific molecular machineries of biogenesis and release, as compared with other biophysically similar EVs. The MISEV2018 guidelines include tables and outlines of suggested protocols and steps to follow to document specific EV-associated functional activities. Finally, a checklist is provided with summaries of key points

The effect of local plant density on pollinator behavior and the breeding system of Persoonia bargoensis (Proteaceae)

Local plant density can vary dramatically within populations and may modify both the quantity and effectiveness of pollinator activity and thus the reproductive output of plants. We tested the effects of local plant density and plant size on pollinator activity on the endangered plant Persoonia bargoensis in two remnant populations in Australia. Pollinator visitation was weakly but positively correlated with local plant density in both populations (R2 ¼ 0:25, P \u3c 0:001; R2 ¼ 0:06, P ¼ 0:024) and with plant size in one population (R2 ¼ 0:24, P \u3c 0:001). Within-plant movement of fluorescent dyes (added to anthers as a pollen mimic) was inversely related to local flower density (R2 ¼ 0:689, P ¼ 0:041). To assess self-compatibility in P. bargoensis, we measured the presence of pollen tubes in flowers that were hand pollinated with self or outcross pollen, which indicated that plants were self-compatible with a weak preference for outcross pollen. The autogamy (mechanical self-pollination) treatment indicated that pollinators are required for pollination. The open treatment showed low and highly variable pollination rates for a rare species (only 20% of 120 had pollen tubes), suggesting that plants receive variable pollinator service. Reliance on pollinators and a preference for outcross pollen implies that the observed pollinator behavior would reduce the reproductive output of P. bargoensis at low local densities

THE FORMATION OF CLONAL TERRITORIES IN EXPERIMENTAL POPULATIONS OF THE SEA ANEMONE ACTINIA TENEBROSA

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Microsatellite primers for vulnerable and thriving acacia (Fabaceae) species from Australia\u27s arid zone

Premise of the study: Microsatellite markers were developed for the common arid Australian shrub Acacia ligulata (Fabaceae) and the threatened overstory trees A. melvillei and A. pendula. Methods and Results: DNA sequence data generated by 454 sequencing were used to identify microsatellite nucleotide repeat motifs. Including previously developed primer sets, we report on the development of 10 polymorphic microsatellite loci for each species. Six of these were novel for A. melvillei and A. ligulata, and five were novel for A. pendula, while five more each were transferred from primers developed for related species (A. carneorum and A. loderi). We found three to 17 alleles per locus for each species, with high multilocus genotypic diversity within each of two A. ligulata and A. pendula stands, and one A. melvillei population. A second A. melvillei stand appeared to be monoclonal. Conclusions: These markers will allow assessment of population genetics, mating systems, and connectedness of populations of these and possibly other arid-zone acacias