A Panorama on Multiscale Geometric Representations, Intertwining Spatial, Directional and Frequency Selectivity

The richness of natural images makes the quest for optimal representations in image processing and computer vision challenging. The latter observation has not prevented the design of image representations, which trade off between efficiency and complexity, while achieving accurate rendering of smooth regions as well as reproducing faithful contours and textures. The most recent ones, proposed in the past decade, share an hybrid heritage highlighting the multiscale and oriented nature of edges and patterns in images. This paper presents a panorama of the aforementioned literature on decompositions in multiscale, multi-orientation bases or dictionaries. They typically exhibit redundancy to improve sparsity in the transformed domain and sometimes its invariance with respect to simple geometric deformations (translation, rotation). Oriented multiscale dictionaries extend traditional wavelet processing and may offer rotation invariance. Highly redundant dictionaries require specific algorithms to simplify the search for an efficient (sparse) representation. We also discuss the extension of multiscale geometric decompositions to non-Euclidean domains such as the sphere or arbitrary meshed surfaces. The etymology of panorama suggests an overview, based on a choice of partially overlapping "pictures". We hope that this paper will contribute to the appreciation and apprehension of a stream of current research directions in image understanding.Comment: 65 pages, 33 figures, 303 reference

On the automatic detection of otolith features for fish species identification and their age estimation

This thesis deals with the automatic detection of features in signals, either extracted from photographs or captured by means of electronic sensors, and its possible application in the detection of morphological structures in fish otoliths so as to identify species and estimate their age at death. From a more biological perspective, otoliths, which are calcified structures located in the auditory system of all teleostean fish, constitute one of the main elements employed in the study and management of marine ecology. In this sense, the application of Fourier descriptors to otolith images, combined with component analysis, is habitually a first and a key step towards characterizing their morphology and identifying fish species. However, some of the main limitations arise from the poor interpretation that can be obtained with this representation and the use that is made of the coefficients, as generally they are selected manually for classification purposes, both in quantity and representativity. The automatic detection of irregularities in signals, and their interpretation, was first addressed in the so-called Best-Basis paradigm. In this sense, Saito's Local discriminant Bases algorithm (LDB) uses the Discrete Wavelet Packet Transform (DWPT) as the main descriptive tool for positioning the irregularities in the time-frequency space, and an energy-based discriminant measure to guide the automatic search of relevant features in this domain. Current density-based proposals have tried to overcome the limitations of the energy-based functions with relatively little success. However, other measure strategies more consistent with the true classification capability, and which can provide generalization while reducing the dimensionality of features, are yet to be developed. The proposal of this work focuses on a new framework for one-dimensional signals. An important conclusion extracted therein is that such generalization involves a mesure system of bounded values representing the density where no class overlaps. This determines severely the selection of features and the vector size that is needed for proper class identification, which must be implemented not only based on global discriminant values but also on the complementary information regarding the provision of samples in the domain. The new tools have been used in the biological study of different hake species, yielding good classification results. However, a major contribution lies on the further interpretation of features the tool performs, including the structure of irregularities, time-frequency position, extension support and degree of importance, which is highlighted automatically on the same images or signals. As for aging applications, a new demodulation strategy for compensating the nonlinear growth effect on the intensity profile has been developed. Although the method is, in principle, able to adapt automatically to the specific growth of individual specimens, preliminary results with LDB-based techniques suggest to study the effect of lighting conditions on the otoliths in order to design more reliable techniques for reducing image contrast variation. In the meantime, a new theoretic framework for otolith-based fish age estimation has been presented. This theory suggests that if the true fish growth curve is known, the regular periodicity of age structures in the demodulated profile is related to the radial length the original intensity profile is extracted from. Therefore, if this periodicity can be measured, it is possible to infer the exact fish age omitting feature extractors and classifiers. This could have important implications in the use of computational resources anc current aging approaches.El eje principal de esta tesis trata sobre la detección automática de singularidades en señales, tanto si se extraen de imágenes fotográ cas como si se capturan de sensores electrónicos, así como su posible aplicación en la detección de estructuras morfológicas en otolitos de peces para identi car especies, y realizar una estimación de la edad en el momento de su muerte. Desde una vertiente más biológica, los otolitos, que son estructuras calcáreas alojadas en el sistema auditivo de todos los peces teleósteos, constituyen uno de los elementos principales en el estudio y la gestión de la ecología marina. En este sentido, el uso combinado de descriptores de Fourier y el análisis de componentes es el primer paso y la clave para caracterizar su morfología e identi car especies marinas. Sin embargo, una de las limitaciones principales de este sistema de representación subyace en la interpretación limitada que se puede obtener de las irregularidades, así como el uso que se hace de los coe cientes en tareas de clasi cación que, por lo general, acostumbra a seleccionarse manualmente tanto por lo que respecta a la cantidad y a su importancia. La detección automática de irregularidades en señales, y su interpretación, se abordó por primera bajo el marco del Best-Basis paradigm. En este sentido, el algoritmo Local Discriminant Bases (LDB) de N. Saito utiliza la Transformada Wavelet Discreta (DWT) para describir el posicionamiento de características en el espacio tiempo-frecuencia, y una medida discriminante basada en la energía para guiar la búsqueda automática de características en dicho dominio. Propuestas recientes basadas en funciones de densidad han tratado de superar las limitaciones que presentaban las medidas de energía con un éxito relativo. No obstante, todavía están por desarrollar nuevas estrategias más consistentes con la capacidad real de clasi cación y que ofrezcan mayor generalización al reducir la dimensión de los datos de entrada. La propuesta de este trabajo se centra en un nuevo marco para señales unidimensionales. Una conclusión principal que se extrae es que dicha generalización pasa por un marco de medidas de valores acotados que re ejen la densidad donde las clases no se solapan. Esto condiciona severamente el proceso de selección de características y el tamaño del vector necesario para identi car las clases correctamente, que se ha de establecer no sólo en base a valores discriminantes globales sino también en la información complementaria sobre la disposición de las muestras en el dominio. Las nuevas herramientas han sido utilizadas en el estudio biológico de diferentes especies de merluza, donde se han conseguido buenos resultados de identi cación. No obstante, la contribución principal subyace en la interpretación que dicha herramienta hace de las características seleccionadas, y que incluye la estructura de las irregularidades, su posición temporal-frecuencial, extensión en el eje y grado de relevancia, el cual, se resalta automáticamente sobre la misma imagen o señal. Por lo que respecta a la determinación de la edad, se ha planteado una nueva estrategia de demodulación para compensar el efecto del crecimiento no lineal en los per les de intensidad. Inicialmente, aunque el método implementa un proceso de optimización capaz de adaptarse al crecimiento individual de cada pez automáticamente, resultados preliminares obtenidos con técnicas basadas en el LDB sugieren estudiar el efecto de las condiciones lumínicas sobre los otolitos con el n de diseñar algoritmos que reduzcan la variación del contraste de la imagen más ablemente. Mientras tanto, se ha planteado una nueva teoría para estimar la edad de los peces en base a otolitos. Esta teoría sugiere que si la curva de crecimiento real del pez se conoce, el período regular de los anillos en el per l demodulado está relacionado con la longitud total del radio donde se extrae el per l original. Por tanto, si dicha periodicidad es medible, es posible determinar la edad exacta sin necesidad de utilizar extractores de características o clasi cadores, lo cual tendría implicaciones importantes en el uso de recursos computacionales y en las técnicas actuales de estimación de la edad.L'eix principal d'aquesta tesi tracta sobre la detecció automàtica d'irregularitats en senyals, tant si s'extreuen de les imatges fotogrà ques com si es capturen de sensors electrònics, així com la seva possible aplicació en la detecció d'estructures morfològiques en otòlits de peixos per identi car espècies, i realitzar una estimació de l'edat en el moment de la seva mort. Des de la vesant més biològica, els otòlits, que son estructures calcàries que es troben en el sistema auditiu de tots els peixos teleostis, constitueixen un dels elements principals en l'estudi i la gestió de l'ecologia marina. En aquest sentit, l'ús combinat de descriptors de Fourier i l'anàlisi de components es el primer pas i la clau per caracteritzar la seva morfologia i identi car espècies marines. No obstant, una de les limitacions principals d'aquest sistema de representació consisteix en la interpretació limitada de les irregularitats que pot desenvolupar, així com l'ús que es realitza dels coe cients en tasques de classi cació, els quals, acostumen a ser seleccionats manualment tant pel que respecta a la quantitat com la seva importància. La detecció automàtica d'irregularitats en senyals, així com la seva interpretació, es va tractar per primera vegada sota el marc del Best-Basis paradigm. En aquest sentit, l'algorisme Local Discriminant Bases (LDB) de N. Saito es basa en la Transformada Wavelet Discreta (DWT) per descriure el posicionament de característiques dintre de l'espai temporal-freqüencial, i en una mesura discriminant basada en l'energia per guiar la cerca automàtica de característiques dintre d'aquest domini. Propostes més recents basades en funcions de densitat han tractat de superar les limitacions de les mesures d'energia amb un èxit relatiu. No obstant, encara s'han de desenvolupar noves estratègies que siguin més consistents amb la capacitat real de classi cació i ofereixin més generalització al reduir la dimensió de les dades d'entrada. La proposta d'aquest treball es centra en un nou marc per senyals unidimensionals. Una de las conclusions principals que s'extreu es que aquesta generalització passa per establir un marc de mesures acotades on els valors re ecteixin la densitat on cap classe es solapa. Això condiciona bastant el procés de selecció de característiques i la mida del vector necessari per identi car les classes correctament, que s'han d'establir no només en base a valors discriminants globals si no també en informació complementària sobre la disposició de les mostres en el domini. Les noves eines s'han utilitzat en diferents estudis d'espècies de lluç, on s'han obtingut bons resultats d'identi cació. No obstant, l'aportació principal consisteix en la interpretació que l'eina extreu de les característiques seleccionades, i que inclou l'estructura de les irregularitats, la seva posició temporal-freqüencial, extensió en l'eix i grau de rellevància, el qual, es ressalta automàticament sobre les mateixa imatge o senyal. En quan a l'àmbit de determinació de l'edat, s'ha plantejat una nova estratègia de demodulació de senyals per compensar l'efecte del creixement no lineal en els per ls d'intensitat. Tot i que inicialment aquesta tècnica desenvolupa un procés d'optimització capaç d'adaptar-se automàticament al creixement individual de cada peix, els resultats amb el LDB suggereixen estudiar l'efecte de les condicions lumíniques sobre els otòlits amb la nalitat de dissenyar algorismes que redueixin la variació del contrast de les imatges més ablement. Mentrestant s'ha plantejat una nova teoria per realitzar estimacions d'edat en peixos en base als otòlits. Aquesta teoria suggereix que si la corba de creixement és coneguda, el període regular dels anells en el per l d'intensitat demodulat està relacionat amb la longitud total de radi d'on s'agafa el per l original. Per tant, si la periodicitat es pot mesurar, es possible conèixer l'edat exacta del peix sense usar extractors de característiques o classi cadors, la qual cosa tindria implicacions importants en l'ús de recursos computacionals i en les tècniques actuals d'estimació de l'edat.Postprint (published version

Wavelet and Multiscale Methods

Various scientific models demand finer and finer resolutions of relevant features. Paradoxically, increasing computational power serves to even heighten this demand. Namely, the wealth of available data itself becomes a major obstruction. Extracting essential information from complex structures and developing rigorous models to quantify the quality of information leads to tasks that are not tractable by standard numerical techniques. The last decade has seen the emergence of several new computational methodologies to address this situation. Their common features are the nonlinearity of the solution methods as well as the ability of separating solution characteristics living on different length scales. Perhaps the most prominent examples lie in multigrid methods and adaptive grid solvers for partial differential equations. These have substantially advanced the frontiers of computability for certain problem classes in numerical analysis. Other highly visible examples are: regression techniques in nonparametric statistical estimation, the design of universal estimators in the context of mathematical learning theory and machine learning; the investigation of greedy algorithms in complexity theory, compression techniques and encoding in signal and image processing; the solution of global operator equations through the compression of fully populated matrices arising from boundary integral equations with the aid of multipole expansions and hierarchical matrices; attacking problems in high spatial dimensions by sparse grid or hyperbolic wavelet concepts. This workshop proposed to deepen the understanding of the underlying mathematical concepts that drive this new evolution of computation and to promote the exchange of ideas emerging in various disciplines

A state space approach to the design of globally optimal FIR energy compaction filters

We introduce a new approach for the least squared optimization of a weighted FIR filter of arbitrary order N under the constraint that its magnitude squared response be Nyquist(M). Although the new formulation is general enough to cover a wide variety of applications, the focus of the paper is on optimal energy compaction filters. The optimization of such filters has received considerable attention in the past due to the fact that they are the main building blocks in the design of principal component filter banks (PCFBs). The newly proposed method finds the optimum product filter Fopt(z)=Hopt(Z)Hopt (z^-1) corresponding to the compaction filter Hopt (z). By expressing F(z) in the form D(z)+D(z^-1), we show that the compaction problem can be completely parameterized in terms of the state-space realization of the causal function D(z). For a given input power spectrum, the resulting filter Fopt(z) is guaranteed to be a global optimum solution due to the convexity of the new formulation. The new algorithm is universal in the sense that it works for any M, arbitrary filter length N, and any given input power spectrum. Furthermore, additional linear constraints such as wavelets regularity constraints can be incorporated into the design problem. Finally, obtaining Hopt(z) from Fopt(z) does not require an additional spectral factorization step. The minimum-phase spectral factor Hmin(z) can be obtained automatically by relating the state space realization of Dopt(z) to that of H opt(z

Wavelets and Subband Coding

First published in 1995, Wavelets and Subband Coding offered a unified view of the exciting field of wavelets and their discrete-time cousins, filter banks, or subband coding. The book developed the theory in both continuous and discrete time, and presented important applications. During the past decade, it filled a useful need in explaining a new view of signal processing based on flexible time-frequency analysis and its applications. Since 2007, the authors now retain the copyright and allow open access to the book

SUBDIVIDE AND CONQUER RESOLUTION

This contribution will be freewheeling in the domain of signal, image and surface processing and touch briefly upon some topics that have been close to the heart of people in our research group. A lot of the research of the last 20 years in this domain that has been carried out world wide is dealing with multiresolution. Multiresolution allows to represent a function (in the broadest sense) at different levels of detail. This was not only applied in signals and images but also when solving all kinds of complex numerical problems. Since wavelets came into play in the 1980's, this idea was applied and generalized by many researchers. Therefore we use this as the central idea throughout this text. Wavelets, subdivision and hierarchical bases are the appropriate tools to obtain these multiresolution effects. We shall introduce some of the concepts in a rather informal way and show that the same concepts will work in one, two and three dimensions. The applications in the three cases are however quite different, and thus one wants to achieve very different goals when dealing with signals, images or surfaces. Because completeness in our treatment is impossible, we have chosen to describe two case studies after introducing some concepts in signal processing. These case studies are still the subject of current research. The first one attempts to solve a problem in image processing: how to approximate an edge in an image efficiently by subdivision. The method is based on normal offsets. The second case is the use of Powell-Sabin splines to give a smooth multiresolution representation of a surface. In this context we also illustrate the general method of construction of a spline wavelet basis using a lifting scheme

Geophysical data fusion of ground-penetrating radar and magnetic datasets using 2D Wavelet transform and singular value decomposition

This work addresses the problem of the lack of perceptibility that geophysical data may have. Data fusion allows us to combine datasets, providing an improved and more informative source of information about structures buried in the ground. After testing different approaches, a strategy was developed using ground-penetrating radar and magnetic datasets collected over the same area. Data collected at the Roman Villa of Pisões (Beja, Portugal), which is a place of easy application of geophysical methods, were used to test the method, but with problems caused by the properties of the soil. The approach was based on processing operations that allow the fusion of images obtained by different equipment widely used in medical imaging for tumor detection and image processing. The goal is to create an improved image with data fusion that has higher quality than the input images, allowing a better understanding of the object of the study. The approach is composed of two stages: pre-processing and data fusion. Pre-processing is applied to enhance the input data. It consists of removing background noise through singular value decomposition applied in the spectral domain. Then the calculation of the data entropy will highlight the differences corresponding to the spatial alignments compatible with buried structures. Then, both entropy maps of the two datasets are fused in the second processing step to produce the final image. This step involves applying the 2D wavelet transform to each entropy map, decomposing them into sub-bands. Algorithms to calculate multiresolution singular value decomposition and the image gradient are applied to the sub-bands. The processed sub-band pairs are then fused using specific fusion rules. The fused image is obtained by applying the inverse of the wavelet transform. Data fusion with the proposed approach allows us to obtain a detailed image that is sharper and of better quality than the input datasets. The increase in sharpness and quality can be quantified through the sharpness index and the BRISQUE quality index in several steps of the processing. The obtained values confirm the graphical results. Images produced by the proposed data fusion approach suggest that the perceptibility has increased, allowing us to provide conclusions about the existence of buried structures.This work has been partially supported by the research project “Innovación abierta e inteligente en la EUROACE” with the reference 0049_INNOACE_4_E, by the European Union through the European Regional Development Fund included in COMPETE 2020, and through the Portuguese Foundation for Science and Technology (FCT) by the projects UIDB/04683/2020-ICT (Institute of Earth Sciences) and SFRH/BSAB/143063/2018

Statistical Shape Spaces for 3D Data: A Review

International audienceMethods and systems for capturing 3D geometry are becoming increasingly commonplace–and with them a plethora of 3D data. Much of this data is unfortunately corrupted by noise, missing data, occlusions or other outliers. However, when we are interested in the shape of a particular class of objects, such as human faces or bodies, we can use machine learning techniques, applied to clean, registered databases of these shapes, to make sense of raw 3D point clouds or other data. This has applications ranging from virtual change rooms to motion and gait analysis to surgical planning depending on the type of shape. In this chapter, we give an overview of these techniques, a brief review of the literature, and comparative evaluation of two such shape spaces for human faces