A biophysical model applied to the Benguela upwelling system

A three-dimensional biophysical model for the Benguela upwelling system is described. The model (NORWECOM) has been used in previous works to study model circulation, primary production and dispersion of particles (fishlarvae and pollution) in the North Sea. The primary task of this work has been to validate its implementation in the Benguela upwelling system by reproducing several of the main characteristics in the area. The results showa well-developed Agulhas Current, the Agulhas retroflection and Agulhas rings. The model is also able to identify main upwelling cells in their correct location, the Angola-Benguela front and a longshore thermal front outsidethe upwelling area. The Benguela Current and a poleward undercurrent, following the shelf-break, is also shown

Global, regional, and national incidence, prevalence, and years lived with disability for 310 diseases and injuries, 1990-2015:a systematic analysis for the Global Burden of Disease Study 2015

Background Non-fatal outcomes of disease and injury increasingly detract from the ability of the world's population to live in full health, a trend largely attributable to an epidemiological transition in many countries from causes affecting children, to non-communicable diseases (NCDs) more common in adults. For the Global Burden of Diseases, Injuries, and Risk Factors Study 2015 (GBD 2015), we estimated the incidence, prevalence, and years lived with disability for diseases and injuries at the global, regional, and national scale over the period of 1990 to 2015.Methods We estimated incidence and prevalence by age, sex, cause, year, and geography with a wide range of updated and standardised analytical procedures. Improvements from GBD 2013 included the addition of new data sources, updates to literature reviews for 85 causes, and the identification and inclusion of additional studies published up to November, 2015, to expand the database used for estimation of non-fatal outcomes to 60 900 unique data sources. Prevalence and incidence by cause and sequelae were determined with DisMod-MR 2.1, an improved version of the DisMod-MR Bayesian meta-regression tool first developed for GBD 2010 and GBD 2013. For some causes, we used alternative modelling strategies where the complexity of the disease was not suited to DisMod-MR 2.1 or where incidence and prevalence needed to be determined from other data. For GBD 2015 we created a summary indicator that combines measures of income per capita, educational attainment, and fertility (the Socio-demographic Index [SDI]) and used it to compare observed patterns of health loss to the expected pattern for countries or locations with similar SDI scores.Findings We generated 9.3 billion estimates from the various combinations of prevalence, incidence, and YLDs for causes, sequelae, and impairments by age, sex, geography, and year. In 2015, two causes had acute incidences in excess of 1 billion: upper respiratory infections (17.2 billion, 95% uncertainty interval [UI] 15.4-19.2 billion) and diarrhoeal diseases (2.39 billion, 2.30-2.50 billion). Eight causes of chronic disease and injury each affected more than 10% of the world's population in 2015: permanent caries, tension-type headache, iron-deficiency anaemia, age-related and other hearing loss, migraine, genital herpes, refraction and accommodation disorders, and ascariasis. The impairment that affected the greatest number of people in 2015 was anaemia, with 2.36 billion (2.35-2.37 billion) individuals affected. The second and third leading impairments by number of individuals affected were hearing loss and vision loss, respectively. Between 2005 and 2015, there was little change in the leading causes of years lived with disability (YLDs) on a global basis. NCDs accounted for 18 of the leading 20 causes of age-standardised YLDs on a global scale. Where rates were decreasing, the rate of decrease for YLDs was slower than that of years of life lost (YLLs) for nearly every cause included in our analysis. For low SDI geographies, Group 1 causes typically accounted for 20-30% of total disability, largely attributable to nutritional deficiencies, malaria, neglected tropical diseases, HIV/AIDS, and tuberculosis. Lower back and neck pain was the leading global cause of disability in 2015 in most countries. The leading cause was sense organ disorders in 22 countries in Asia and Africa and one in central Latin America; diabetes in four countries in Oceania; HIV/AIDS in three southern sub-Saharan African countries; collective violence and legal intervention in two north African and Middle Eastern countries; iron-deficiency anaemia in Somalia and Venezuela; depression in Uganda; onchoceriasis in Liberia; and other neglected tropical diseases in the Democratic Republic of the Congo.Interpretation Ageing of the world's population is increasing the number of people living with sequelae of diseases and injuries. Shifts in the epidemiological profile driven by socioeconomic change also contribute to the continued increase in years lived with disability (YLDs) as well as the rate of increase in YLDs. Despite limitations imposed by gaps in data availability and the variable quality of the data available, the standardised and comprehensive approach of the GBD study provides opportunities to examine broad trends, compare those trends between countries or subnational geographies, benchmark against locations at similar stages of development, and gauge the strength or weakness of the estimates available. Copyright (C) The Author(s). Published by Elsevier Ltd.</p

Indications of a negative impact of herring on recruitment of Norway pout

The Norway pout (Trisopterus esmarkii) stock in the North Sea has experienced poor recruitment recently. Herring (Clupea harengus) has been suggested to be a major predator on fish larvae in the North Sea. We investigated possible interactions between herring and Norway pout using a simple statistical analysis and a modified stock - recruit relationship. There was a significant negative relationship (linear regression, r = 20.44, p < 0.05) between total herring biomass and recruitment of Norway pout. The spawning stock of Norway pout is typically dominated by 2-year-olds, and there was a strong negative relationship (linear regression, r = 20.79, p < 0.01) between herring biomass and Norway pout spawning-stock biomass (SSB) 2 years later. A Beverton-Holt model fitted to stock recruit data of Norway pout produced a rather poor correlation (r(2) = 0.04). However, when only the Norway pout SSB not overlapping with herring is considered, the fit between the model and the stock - recruit data improves (r(2) = 0.31). The analyses indicate a negative impact by herring on recruitment of Norway pout, the most plausible cause for this being herring predation on Norway pout larvae, but field studies are needed to verify such predation

Decadal fluctuations in North Atlantic water inflow in the North Sea between 1958-2003: impacts on temperature and phytoplankton populations

The circulation of Atlantic water along the European continental slope, in particular the inflow into the North Sea, influences North Sea water characteristics with consequent changes in the environment affecting plankton community dynamics. The long-term effect of fluctuating oceanographic conditions oil the North Sea, pelagic ecosystem is assessed. It is shown that (i) there are similar regime shifts in the inflow through the northern North Sea and in Sea, Surface Temperature, (ii) long-term phytoplankton trends are influenced by the inflow only in some North Sea regions, and (iii) the spatial variability in chemicophysical and biological parameters highlight the influence of smaller scale processes

Overwintering distribution, inflow patterns and sustainability of Calanus finmarchicus in the North Sea

Calanoid copepods are key taxa in the North Sea as they are the main food source for many fish stocks, such as herring, mackerel and cod. In this study we use an individual-based model for Calanus finmarchicus embedded in the NORWegian ECOlogical Model system (NORWECOM) to investigate important population parameters such as biomass and abundance, distribution and interannual variability of the overwintering population, as well as the inflow of C. finmarchicus into the North Sea from adjacent areas for the 2000–2016 period. The modelled spatial–temporal patterns of C. finmarchicus abundance is comparable with the Continuous Plankton Recorder (CPR) Survey data in the northern North Sea. The simulated annual mean biomass of C. finmarchicus amounts to 0.94 million-tonnes of carbon. High overwintering biomass appears in the Norwegian Trench as well as in the north-west shelf region of the North Sea. A decreasing trend in the overwintering biomass has been detected on the path of the East Shetland Atlantic Inflow (ESAI) over the simulated period. The inflow of C. finmarchicus biomass into the North Sea from the north constitutes on average 41% of the annual mean biomass in the North Sea during the simulated 17 years, and thus determines the interannual variability of the biomass. We conclude that the C. finmarchicus population in the North Sea is not self-sustained and is highly dependent on the inflow of C. finmarchicus from the Faroe-Shetland Channel and south of the Norwegian Sea. C. finmarchicus enter the North Sea via three branches of the North Atlantic current with variable depths depending on seasons and topography. Beside the western flank of the Norwegian Trench (carrying 57% of the inflow biomass), we suggest that the ESAI is also an important agent carrying 37% of the total C. finmarchicus inflow biomass through the shelf area into the north-west of the North Sea. The annual mean outflow biomass is larger than the inflow biomass (0.52 versus 0.39 million-tonnes carbon per year), which indicates that the North Sea serves as a feeding ground and growth region for C. finmarchicus. This study is a first step towards a better understanding and quantification of the exchange of C. finmarchicus between the open seas, coastal waters and the fjords

Variation in life-history traits of European anchovy along a latitudinal gradient: a bioenergetics modelling approach

Anchovy Engraulis encrasicolus distribution in European waters spans from the Mediterranean Sea to the North Sea, and is expected to expand further north with global warming. Observations from the eastern Mediterranean (North Aegean Sea), the Bay of Biscay and the North Sea reveal latitudinal differences in growth, maximum size, fecundity and timing of reproduction. We set up a mechanistic framework combining a bioenergetics model with regional physical-biogeochemical models providing temperature and zooplankton biomass to investigate the underlying mechanisms of variation in these traits. The bioenergetics model, based on the Dynamic Energy Budget theory and initially calibrated in the Bay of Biscay, was used to simulate growth and reproduction patterns. Environment partly explained the increased growth rate and larger body size towards the north. However, regional calibration of the maximum assimilation rate was necessary to obtain the best model fit. This suggests a genetic adaptation, with a pattern of cogradient variation with increasing resource towards the north, in addition to a countergradient thermal adaptation. Overall, the seasonal energy dynamics supports the pattern of body-size scaling with latitude, i.e. food-limited growth but low maintenance costs in the warm Aegean Sea, and larger size in the North Sea allowing sufficient storage capacity for overwintering. Further, the model suggests a synchronisation of reproductive timing with environmental seasonality as a trade-off between thresholds of temperature and reserves for spawning and overwintering, respectively. Finally, low temperature, short productive and spawning seasons, and insufficient reserves for overwintering appear to be current limitations for an expansion of anchovy to the Norwegian Sea

Ocean climate and hydrodynamics drive decadal shifts in Northeast Atlantic dinoflagellates

The abundance of large marine dinoflagellates has declined in the North Sea since 1958. Although hypotheses have been proposed to explain this diminution (increasing temperature and wind), the mechanisms behind this pattern have thus far remained elusive. In this article, we study the long-term changes in dinoflagellate biomass and biodiversity in relation to hydro-climatic conditions and circulation within the North Atlantic. Our results show that the decline in biomass has paralleled an increase in biodiversity caused by a temperature-induced northward movement of subtropical taxa along the European shelf-edge, and facilitated by changes in oceanic circulation (subpolar gyre contraction). However, major changes in North Atlantic hydrodynamics in the 2010s (subpolar gyre expansion and low-salinity anomaly) stopped this movement, which triggered a biodiversity collapse in the North Sea. Further, North Sea dinoflagellate biomass remained low because of warming. Our results, therefore, reveal that regional climate warming and changes in oceanic circulation strongly influenced shifts in dinoflagellate biomass and biodiversit

Large-scale salmon farming in Norway impacts the epiphytic community of Laminaria hyperborea

Large-scale finfish farms are increasingly located in dispersive hard-bottom environments where Laminaria hyperborea forests dominate; however, the interactions between farm effluents and kelp forests are poorly understood. Effects of 2 levels of salmonid fish-farming effluents (high and low) on L. hyperborea epiphytic communities were studied by sampling canopy plants from 12 sites in 2 high-energy dispersive environments. Specifically, we assessed if farm effluents stimulated fast-growing epiphytic algae and faunal species on L. hyperborea stipes—as this can impact the kelp forest community composition—and/or an increased lamina epiphytic growth, which could negatively impact the kelp itself. We found that bryozoan biomass on the stipes was significantly higher at high-effluent farm sites compared to low-effluent farm and reference sites, resulting in a significantly different epiphytic community. Macroalgal biomass also increased with increasing effluent levels, including opportunistic Ectocarpus spp., resulting in a less heterogeneous macroalgae community at high-effluent farm sites. This habitat heterogeneity was further reduced by the high bryozoan biomass at the high-effluent sites. Such changes in the epiphyte community could have implications for the faunal community that relies on the epiphytes for food and refuge. On the kelp lamina, no clear response to farm effluents was found