Development of a quick and reliable molecular detection system for Sclerotinia stem rot of canola in western Canada

Non-Peer ReviewedSclerotinia stem rot is an important, yield-limiting disease of canola caused by the necrotrophic fungus Sclerotinia sclerotiorum. The development of stem rot is highly dependent on environmental conditions and inoculum levels, and as a result disease occurrence and severity are sporadic in nature. In western Canada, stem rot is primarily controlled through the routine application of fungicides, which are often applied with no indication of disease risk. In order to reduce non-economical application of fungicides, a reliable forecasting system is needed. Since the infection of canola petals in an important step in the stem rot disease cycle, a quantitative (q)PCR-based system that can give an estimate of petal infestation rates could form the basis of a reliable forecasting system to help guide fungicide spray decisions. A primer and TaqMan probe have been developed based on the sequence of a novel protein that is specific to S. sclerotiorum. This primer-probe system, when used in a TaqMan qPCR assay, can quantify S. sclerotiorum DNA with a high level of sensitivity and specificity. The development of an internal amplification control will further increase the reliability of the assay by accounting for false negatives. This assay shows great potential for use as the basis of a stem rot forecasting system for canola in western Canada

Phase transitions in higher derivative gravity and gauge theory: R-charged black holes

This is a continuation of our earlier work where we constructed a phenomenologically motivated effective action of the boundary gauge theory at finite temperature and finite gauge coupling on $S^3 \times S^1$. In this paper, we argue that this effective action qualitatively reproduces the gauge theory representing various bulk phases of R-charged black hole with Gauss-Bonnet correction. We analyze the system both in canonical and grand canonical ensemble.Comment: 36 pages, 16 figures; v2: typos corrected, references adde

Hagedorn divergences and tachyon potential

We consider the critical behavior for a string theory near the Hagedorn temperature. We use the factorization of the worldsheet to isolate the Hagedorn divergences at all genera. We show that the Hagedorn divergences can be resummed by introducing double scaling limits, which smooth the divergences. The double scaling limits also allow one to extract the effective potential for the thermal scalar. For a string theory in an asymptotic anti-de Sitter (AdS) spacetime, the AdS/CFT correspondence implies that the critical Hagedorn behavior and the relation with the effective potential should also arise from the boundary Yang-Mills theory. We show that this is indeed the case. In particular we find that the free energy of a Yang-Mills theory contains ``vortex'' contributions at finite temperature. Yang-Mills Feynman diagrams with vortices can be identified with contributions from boundaries of moduli space on the string theory side.Comment: 36 pages, 13 figures, uses harvma

Does Solar Physics Provide Constraints to Weakly Interacting Massive Particles?

We investigate whether present data on helioseismology and solar neutrino fluxes may constrain WIMP--matter interactions in the range of WIMP parameters under current exploration in WIMP searches. We find that, for a WIMP mass of 30 GeV, once the effect of the presence of WIMPs in the Sun's interior is maximized, the squared isothermal sound speed is modified, with respect to the standard solar model, by at most 0.4% at the Sun's center. The maximal effect on the Boron-8 solar neutrino flux is a reduction of 4.5%. Larger masses lead to smaller effects. These results imply that present sensitivities in the measurements of solar properties, though greatly improved in recent years, do not provide information or constraints on WIMP properties of relevance for dark matter. Furthermore, we show that, when current bounds from direct WIMP searches are taken into account, the effect induced by WIMPs with dominant coherent interactions are drastically reduced as compared to the values quoted above. The case of neutralinos in the minimal supersymmetric standard model is also discussed.Comment: 31 pages, 2 tables and 9 figures, typeset with ReVTeX4. The paper may also be found at http://www.to.infn.it/~fornengo/papers/helio.ps.gz or through http://www.to.infn.it/astropart/index.htm

Anisotropic flow of charged hadrons, pions and (anti-)protons measured at high transverse momentum in Pb-Pb collisions at sNN=2.76\sqrt{s_{\rm NN}}=2.76 TeV

The elliptic, $v_2$, triangular, $v_3$, and quadrangular, $v_4$, azimuthal anisotropic flow coefficients are measured for unidentified charged particles, pions and (anti-)protons in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 2.76$ TeV with the ALICE detector at the Large Hadron Collider. Results obtained with the event plane and four-particle cumulant methods are reported for the pseudo-rapidity range $|\eta|<0.8$ at different collision centralities and as a function of transverse momentum, $p_{\rm T}$, out to $p_{\rm T}=20$ GeV/$c$. The observed non-zero elliptic and triangular flow depends only weakly on transverse momentum for $p_{\rm T}>8$ GeV/$c$. The small $p_{\rm T}$ dependence of the difference between elliptic flow results obtained from the event plane and four-particle cumulant methods suggests a common origin of flow fluctuations up to $p_{\rm T}=8$ GeV/$c$. The magnitude of the (anti-)proton elliptic and triangular flow is larger than that of pions out to at least $p_{\rm T}=8$ GeV/$c$ indicating that the particle type dependence persists out to high $p_{\rm T}$.Comment: 16 pages, 5 captioned figures, authors from page 11, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/186

Centrality dependence of charged particle production at large transverse momentum in Pb-Pb collisions at sNN=2.76\sqrt{s_{\rm{NN}}} = 2.76 TeV

The inclusive transverse momentum ($p_{\rm T}$) distributions of primary charged particles are measured in the pseudo-rapidity range $|\eta|<0.8$ as a function of event centrality in Pb-Pb collisions at $\sqrt{s_{\rm{NN}}}=2.76$ TeV with ALICE at the LHC. The data are presented in the $p_{\rm T}$ range $0.15<p_{\rm T}<50$ GeV/$c$ for nine centrality intervals from 70-80% to 0-5%. The Pb-Pb spectra are presented in terms of the nuclear modification factor $R_{\rm{AA}}$ using a pp reference spectrum measured at the same collision energy. We observe that the suppression of high-$p_{\rm T}$ particles strongly depends on event centrality. In central collisions (0-5%) the yield is most suppressed with $R_{\rm{AA}}\approx0.13$ at $p_{\rm T}=6$-7 GeV/$c$. Above $p_{\rm T}=7$ GeV/$c$, there is a significant rise in the nuclear modification factor, which reaches $R_{\rm{AA}} \approx0.4$ for $p_{\rm T}>30$ GeV/$c$. In peripheral collisions (70-80%), the suppression is weaker with $R_{\rm{AA}} \approx 0.7$ almost independently of $p_{\rm T}$. The measured nuclear modification factors are compared to other measurements and model calculations.Comment: 17 pages, 4 captioned figures, 2 tables, authors from page 12, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/284

Measurement of charm production at central rapidity in proton-proton collisions at s=2.76\sqrt{s} = 2.76 TeV

The $p_{\rm T}$-differential production cross sections of the prompt (B feed-down subtracted) charmed mesons D$^0$, D$^+$, and D$^{*+}$ in the rapidity range $|y|<0.5$, and for transverse momentum $1< p_{\rm T} <12$ GeV/$c$, were measured in proton-proton collisions at $\sqrt{s} = 2.76$ TeV with the ALICE detector at the Large Hadron Collider. The analysis exploited the hadronic decays D$^0 \rightarrow$K$\pi$, D$^+ \rightarrow$K$\pi\pi$, D$^{*+} \rightarrow$D$^0\pi$, and their charge conjugates, and was performed on a $L_{\rm int} = 1.1$ nb$^{-1}$ event sample collected in 2011 with a minimum-bias trigger. The total charm production cross section at $\sqrt{s} = 2.76$ TeV and at 7 TeV was evaluated by extrapolating to the full phase space the $p_{\rm T}$-differential production cross sections at $\sqrt{s} = 2.76$ TeV and our previous measurements at $\sqrt{s} = 7$ TeV. The results were compared to existing measurements and to perturbative-QCD calculations. The fraction of cdbar D mesons produced in a vector state was also determined.Comment: 20 pages, 5 captioned figures, 4 tables, authors from page 15, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/307

Particle-yield modification in jet-like azimuthal di-hadron correlations in Pb-Pb collisions at sNN\sqrt{s_{\rm NN}} = 2.76 TeV

The yield of charged particles associated with high-$p_{\rm T}$ trigger particles ($8 < p_{\rm T} < 15$ GeV/$c$) is measured with the ALICE detector in Pb-Pb collisions at $\sqrt{s_{\rm NN}}$ = 2.76 TeV relative to proton-proton collisions at the same energy. The conditional per-trigger yields are extracted from the narrow jet-like correlation peaks in azimuthal di-hadron correlations. In the 5% most central collisions, we observe that the yield of associated charged particles with transverse momenta $p_{\rm T}> 3$ GeV/$c$ on the away-side drops to about 60% of that observed in pp collisions, while on the near-side a moderate enhancement of 20-30% is found.Comment: 15 pages, 2 captioned figures, 1 table, authors from page 10, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/350

Tracking development assistance for health and for COVID-19 : a review of development assistance, government, out-of-pocket, and other private spending on health for 204 countries and territories, 1990-2050

Background The rapid spread of COVID-19 renewed the focus on how health systems across the globe are financed, especially during public health emergencies. Development assistance is an important source of health financing in many low-income countries, yet little is known about how much of this funding was disbursed for COVID-19. We aimed to put development assistance for health for COVID-19 in the context of broader trends in global health financing, and to estimate total health spending from 1995 to 2050 and development assistance for COVID-19 in 2020. Methods We estimated domestic health spending and development assistance for health to generate total health-sector spending estimates for 204 countries and territories. We leveraged data from the WHO Global Health Expenditure Database to produce estimates of domestic health spending. To generate estimates for development assistance for health, we relied on project-level disbursement data from the major international development agencies' online databases and annual financial statements and reports for information on income sources. To adjust our estimates for 2020 to include disbursements related to COVID-19, we extracted project data on commitments and disbursements from a broader set of databases (because not all of the data sources used to estimate the historical series extend to 2020), including the UN Office of Humanitarian Assistance Financial Tracking Service and the International Aid Transparency Initiative. We reported all the historic and future spending estimates in inflation-adjusted 2020 US$, 2020 US$ per capita, purchasing-power parity-adjusted US$per capita, and as a proportion of gross domestic product. We used various models to generate future health spending to 2050. Findings In 2019, health spending globally reached$8. 8 trillion (95% uncertainty interval [UI] 8.7-8.8) or $1132 (1119-1143) per person. Spending on health varied within and across income groups and geographical regions. Of this total,$40.4 billion (0.5%, 95% UI 0.5-0.5) was development assistance for health provided to low-income and middle-income countries, which made up 24.6% (UI 24.0-25.1) of total spending in low-income countries. We estimate that $54.8 billion in development assistance for health was disbursed in 2020. Of this,$13.7 billion was targeted toward the COVID-19 health response. $12.3 billion was newly committed and$1.4 billion was repurposed from existing health projects. $3.1 billion (22.4$2.4 billion (17.9%) was for supply chain and logistics. Only $714.4 million (7.7$1519 (1448-1591) per person in 2050, although spending across countries is expected to remain varied. Interpretation Global health spending is expected to continue to grow, but remain unequally distributed between countries. We estimate that development organisations substantially increased the amount of development assistance for health provided in 2020. Continued efforts are needed to raise sufficient resources to mitigate the pandemic for the most vulnerable, and to help curtail the pandemic for all. Copyright (C) 2021 The Author(s). Published by Elsevier Ltd.Peer reviewe