Modelling marine emissions and atmospheric distributions of halocarbons and dimethyl sulfide: the influence of prescribed water concentration vs. prescribed emissions

Marine-produced short-lived trace gases such as dibromomethane (CH2Br2), bromoform (CHBr3), methyliodide (CH3I) and dimethyl sulfide (DMS) significantly impact tropospheric and stratospheric chemistry. Describing their marine emissions in atmospheric chemistry models as accurately as possible is necessary to quantify their impact on ozone depletion and Earth's radiative budget. So far, marine emissions of trace gases have mainly been prescribed from emission climatologies, thus lacking the interaction between the actual state of the atmosphere and the ocean. Here we present simulations with the chemistry climate model EMAC (ECHAM5/MESSy Atmospheric Chemistry) with online calculation of emissions based on surface water concentrations, in contrast to directly prescribed emissions. Considering the actual state of the model atmosphere results in a concentration gradient consistent with model real-time conditions at the ocean surface and in the atmosphere, which determine the direction and magnitude of the computed flux. This method has a number of conceptual and practical benefits, as the modelled emission can respond consistently to changes in sea surface temperature, surface wind speed, sea ice cover and especially atmospheric mixing ratio. This online calculation could enhance, dampen or even invert the fluxes (i.e. deposition instead of emissions) of very short-lived substances (VSLS). We show that differences between prescribing emissions and prescribing concentrations (−28 % for CH2Br2 to +11 % for CHBr3) result mainly from consideration of the actual, time-varying state of the atmosphere. The absolute magnitude of the differences depends mainly on the surface ocean saturation of each particular gas. Comparison to observations from aircraft, ships and ground stations reveals that computing the air–sea flux interactively leads in most of the cases to more accurate atmospheric mixing ratios in the model compared to the computation from prescribed emissions. Calculating emissions online also enables effective testing of different air–sea transfer velocity (k) parameterizations, which was performed here for eight different parameterizations. The testing of these different k values is of special interest for DMS, as recently published parameterizations derived by direct flux measurements using eddy covariance measurements suggest decreasing k values at high wind speeds or a linear relationship with wind speed. Implementing these parameterizations reduces discrepancies in modelled DMS atmospheric mixing ratios and observations by a factor of 1.5 compared to parameterizations with a quadratic or cubic relationship to wind spee

Assessing a New Clue to How Much Carbon Plants Take Up

Current climate models disagree on how much carbon dioxide land ecosystems take up for photosynthesis. Tracking the stronger carbonyl sulfide signal could help

Point-occurrence self-similarity in crackling-noise systems and in other complex systems

It has been recently found that a number of systems displaying crackling noise also show a remarkable behavior regarding the temporal occurrence of successive events versus their size: a scaling law for the probability distributions of waiting times as a function of a minimum size is fulfilled, signaling the existence on those systems of self-similarity in time-size. This property is also present in some non-crackling systems. Here, the uncommon character of the scaling law is illustrated with simple marked renewal processes, built by definition with no correlations. Whereas processes with a finite mean waiting time do not fulfill a scaling law in general and tend towards a Poisson process in the limit of very high sizes, processes without a finite mean tend to another class of distributions, characterized by double power-law waiting-time densities. This is somehow reminiscent of the generalized central limit theorem. A model with short-range correlations is not able to escape from the attraction of those limit distributions. A discussion on open problems in the modeling of these properties is provided.Comment: Submitted to J. Stat. Mech. for the proceedings of UPON 2008 (Lyon), topic: crackling nois

Spatial heterogeneity of soil properties in relation to microtopography in a non-tidal rewetted coastal mire

AbstractOver the past century, mires and peatlands have faced a wide range of degradation by artificial drainage, making them one of the most threatened ecosystems in Europe. However, restoration of drained peatlands has gained much importance over the last three decades, mostly due to the multiple ecosystem services they provide such as carbon storage, habitat provision and water flow regulation. Although there has been an increased focus on such ecosystems, spatial research on hydrophysical soil properties following rewetting in coastal mires is lacking. Therefore, the objectives of the study were to understand the spatial structures of hydrophysical properties of organic soils and spatial patterns of organic matter accumulation in relation to soil surface microtopography. Soil organic matter content (SOM) and hydraulic conductivity (Ks) of topsoils (0–28 cm), along with soil textures of the underlying mineral substrate, were investigated in a rewetted non-tidal coastal flood mire (Baltic Sea). The results indicate that the organic horizon with its relatively low Ks acts as a hydrological barrier to infiltration. Soil organic matter content (SOM), Ks and soil surface microtopography are all spatially auto-correlated within 100, 87 and 53 m, respectively. Bivariate Moran’s I revealed a positive but weak spatial correlation between SOM and Ks and a moderately strong negative spatial correlation between SOM and soil surface microtopography. A map of SOM was generated using simple kriging, which predicts higher SOM in the centre of the ecosystem, at lower elevations; and lower SOM at the edges of the study area, at higher elevations. Local depressions in the centre of the ecosystem provide a wetter and therefore more anaerobic environment, thereby decreasing carbon mineralisation rates and enabling peat accumulation. The low hydraulic conductivity of the degraded peat in the presence of lower micro-elevations in the centre of the ecosystem is likely to increase the residence time of floodwater and thus may enhance (new) peat accumulation. Thus, we conclude that, for the restoration of non-tidal coastal mires where flooding events are not as frequent, Ks and soil surface microtopography are even more important factors to consider than for tidal systems.Abstract Over the past century, mires and peatlands have faced a wide range of degradation by artificial drainage, making them one of the most threatened ecosystems in Europe. However, restoration of drained peatlands has gained much importance over the last three decades, mostly due to the multiple ecosystem services they provide such as carbon storage, habitat provision and water flow regulation. Although there has been an increased focus on such ecosystems, spatial research on hydrophysical soil properties following rewetting in coastal mires is lacking. Therefore, the objectives of the study were to understand the spatial structures of hydrophysical properties of organic soils and spatial patterns of organic matter accumulation in relation to soil surface microtopography. Soil organic matter content (SOM) and hydraulic conductivity (Ks) of topsoils (0–28 cm), along with soil textures of the underlying mineral substrate, were investigated in a rewetted non-tidal coastal flood mire (Baltic Sea). The results indicate that the organic horizon with its relatively low Ks acts as a hydrological barrier to infiltration. Soil organic matter content (SOM), Ks and soil surface microtopography are all spatially auto-correlated within 100, 87 and 53 m, respectively. Bivariate Moran’s I revealed a positive but weak spatial correlation between SOM and Ks and a moderately strong negative spatial correlation between SOM and soil surface microtopography. A map of SOM was generated using simple kriging, which predicts higher SOM in the centre of the ecosystem, at lower elevations; and lower SOM at the edges of the study area, at higher elevations. Local depressions in the centre of the ecosystem provide a wetter and therefore more anaerobic environment, thereby decreasing carbon mineralisation rates and enabling peat accumulation. The low hydraulic conductivity of the degraded peat in the presence of lower micro-elevations in the centre of the ecosystem is likely to increase the residence time of floodwater and thus may enhance (new) peat accumulation. Thus, we conclude that, for the restoration of non-tidal coastal mires where flooding events are not as frequent, Ks and soil surface microtopography are even more important factors to consider than for tidal systems

Application of Pulsed Field Gel Electrophoresis to Determine γ-ray-induced Double-strand Breaks in Yeast Chromosomal Molecules

The frequency of DNA double-strand breaks (dsb) was determined in yeast cells exposed to γ-rays under anoxic conditions. Genomic DNA of treated cells was separated by pulsed field gel electrophoresis, and two different approaches for the evaluation of the gels were employed: (1) The DNA mass distribution profile obtained by electrophoresis was compared to computed profiles, and the number of DSB per unit length was then derived in terms of a fitting procedure; (2) hybridization of selected chromosomes was performed, and a comparison of the hybridization signals in treated and untreated samples was then used to derive the frequency of dsb

Temporal Dynamics of Preferential Flow to a Subsurface Drain

We conducted a sequential tracer leaching study on a 24.4 by 42.7 m field plot to investigate the temporal behavior of chemical movement to a 1.2-m deep field drain during irrigation and subsequent rainfall events over a 14-d period. The herbicides atrazine [6-chloroN-ethyl-N′-(1-methylethyl)-1,3,5-triazine-2,4-diamine], and alachlor [2-chloro-N-(2,6-diethylphenyl)-N-(methoxymethyl)acetamide] along with the conservative tracer Br were applied to a 1-m wide strip, offset 1.5 m laterally from a subsurface drain pipe, immediately before an 11.3-h long, 4.2-mm h−1 irrigation. Three additional conservative tracers, pentafluorobenzoate (PF), o-trifluoromethylbenzoate (TF), and difluorobenzoate (DF) were applied to the strip during the irrigation at 2-h intervals. Breakthrough of Br and the two herbicides occurred within the first 2-h of irrigation, indicating that a fraction of the solute transport was along preferential flow paths. Retardation and attenuation of the herbicides indicated that there was interaction between the chemicals and the soil lining the preferential pathways. The conservative tracers applied during the later stages of irrigation arrived at the subsurface drain much faster than tracers applied earlier. The final tracer, applied 6 h after the start of irrigation (DF), took only 15 min and 1 mm of irrigation water to travel to the subsurface drain. Model simulations using a two-dimensional, convective, and dispersive numerical model without an explicit preferential flow component failed to reproduce Br tracer concentrations in the drain effluent, confirming the importance of preferential flow. This study showed that preferential flow in this soil is not a uniform process during a leaching event

Evaluating the SWAT model to predict streamflow, nitrate loadings and crop yields in a small agricultural catchment

This study aimed to evaluate the applicability of the Soil and Water Assessment Tool (SWAT) to predict streamflow, nitrate loadings and crop yields for a small agricultural catchment in northeastern Germany. To this end, a 167&thinsp;ha catchment was delineated consisting of 10 hydrological response units. Daily data for streamflow and nitrate loadings from 2004 to 2015 were used to calibrate and validate the model, while annual values for crop yields (winter wheat, winter barley, rapeseed, maize silage) were available. In addition, the detailed field maps provided by the local farmer were used to implement exact crop rotations and nitrogen fertilization into the model. Nash-Sutcliffe-Efficiencies for streamflow were 0.54 during the calibration and 0.57 for the validation period. The modeling performance for nitrate loadings were lower with 0.31 for the calibration and 0.42 for the validation period. The average crop yields were reproduced well, while SWAT failed to reproduce the inter-annual crop yield variations. A scenario analysis revealed that a slight decrease of nitrogen fertilization leads to significant reductions in nitrate loadings, while crop yields remained on a high level. The outcome of the study may help practitioners to operate according to an economic and environmental optimal N management. Nevertheless, experimental studies with varying fertilization intensities at catchment scale are needed to underpin the modeling results.</p

A multi-model intercomparison of halogenated very short-lived substances (TransCom-VSLS): Linking oceanic emissions and tropospheric transport for a reconciled estimate of the stratospheric source gas injection of bromine

Abstract. The first concerted multi-model intercomparison of halogenated very short-lived substances (VSLS) has been performed, within the framework of the ongoing Atmospheric Tracer Transport Model Intercomparison Project (TransCom). Eleven global models or model variants participated (nine chemical transport models and two chemistry–climate models) by simulating the major natural bromine VSLS, bromoform (CHBr3) and dibromomethane (CH2Br2), over a 20-year period (1993–2012). Except for three model simulations, all others were driven offline by (or nudged to) reanalysed meteorology. The overarching goal of TransCom-VSLS was to provide a reconciled model estimate of the stratospheric source gas injection (SGI) of bromine from these gases, to constrain the current measurement-derived range, and to investigate inter-model differences due to emissions and transport processes. Models ran with standardised idealised chemistry, to isolate differences due to transport, and we investigated the sensitivity of results to a range of VSLS emission inventories. Models were tested in their ability to reproduce the observed seasonal and spatial distribution of VSLS at the surface, using measurements from NOAA's long-term global monitoring network, and in the tropical troposphere, using recent aircraft measurements – including high-altitude observations from the NASA Global Hawk platform. The models generally capture the observed seasonal cycle of surface CHBr3 and CH2Br2 well, with a strong model–measurement correlation (r  ≥  0.7) at most sites. In a given model, the absolute model–measurement agreement at the surface is highly sensitive to the choice of emissions. Large inter-model differences are apparent when using the same emission inventory, highlighting the challenges faced in evaluating such inventories at the global scale. Across the ensemble, most consistency is found within the tropics where most of the models (8 out of 11) achieve best agreement to surface CHBr3 observations using the lowest of the three CHBr3 emission inventories tested (similarly, 8 out of 11 models for CH2Br2). In general, the models reproduce observations of CHBr3 and CH2Br2 obtained in the tropical tropopause layer (TTL) at various locations throughout the Pacific well. Zonal variability in VSLS loading in the TTL is generally consistent among models, with CHBr3 (and to a lesser extent CH2Br2) most elevated over the tropical western Pacific during boreal winter. The models also indicate the Asian monsoon during boreal summer to be an important pathway for VSLS reaching the stratosphere, though the strength of this signal varies considerably among models. We derive an ensemble climatological mean estimate of the stratospheric bromine SGI from CHBr3 and CH2Br2 of 2.0 (1.2–2.5) ppt,  ∼  57 % larger than the best estimate from the most recent World Meteorological Organization (WMO) Ozone Assessment Report. We find no evidence for a long-term, transport-driven trend in the stratospheric SGI of bromine over the simulation period. The transport-driven interannual variability in the annual mean bromine SGI is of the order of ±5 %, with SGI exhibiting a strong positive correlation with the El Niño–Southern Oscillation (ENSO) in the eastern Pacific. Overall, our results do not show systematic differences between models specific to the choice of reanalysis meteorology, rather clear differences are seen related to differences in the implementation of transport processes in the models. </jats:p

Land use change impacts on floods at the catchment scale: Challenges and opportunities for future research

Research gaps in understanding flood changes at the catchment scale caused by changes in forest management, agricultural practices, artificial drainage and terracing are identified. Potential strategies in addressing these gaps are proposed, such as complex systems approaches to link processes across time scales, long-term experiments on physical-chemical-biological process interactions, and a focus on connectivity and patterns across spatial scales. It is suggested that these strategies will stimulate new research that coherently addresses the issues across hydrology, soil and agricultural sciences, forest engineering, forest ecology and geomorphology