3,111 research outputs found

    Dark matter candidates in the NMSSM with RH neutrino superfields

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    R-parity conserving supersymmetric models with right-handed (RH) neutrinos are very appealing since they could naturally explain neutrino physics and also provide a good dark matter (DM) candidate such as the lightest supersymmetric particle (LSP). In this work we consider the next-to-minimal supersymmetric standard model (NMSSM) plus RH neutrino superfields, with effective Majorana masses dynamically generated at the electroweak scale (EW). We perform a scan of the relevant parameter space and study both possible DM candidates: RH sneutrino and neutralino. Especially for the case of RH sneutrino DM we analyse the intimate relation between both candidates to obtain the correct amount of relic density. Besides the well-known resonances, annihilations through scalar quartic couplings and coannihilation mechanisms with all kind of neutralinos, are crucial. Finally, we present the impact of current and future direct and indirect detection experiments on both DM candidates.Comment: Version published in JCAP, 40 pages, 8 figures, 6 table

    LICOR-Liquid Columns' Resonances

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    The aim of the experiment LICOR was the investigation of the axial resonances oi cylindrical liquid columns supported by equal circular coaxiaJ disks. In preparation ot the D-2 experiment a •heoreiical model has been developed, which exactly describes the small amplitude oscillations of finite cylindrical columns between coaxial circular disks. In addition, in terrestrial experiments the resonance frequencies of small liquid columns with up to 5 mm in diameter have been determined and investigations with density-matched liquids (silicon oil in a waierlmethanol mixture) have been performed. For the D-2 experiment LICOR the front disk and the rear disk lor use in the AFPM have been constructed and equipped with pressure sensors and the necessary electronics. The pressure exerted by the oscillating liquid column on trie supporting disks vsas as low as 10 Pa. Since the data downlink of the Materials Research Laboratory was just one signal oer second and channel, it was necessary to determine amplitude and phase of the pressure already in the LICOR disks. The D-2 experiment has been successfully performed. It has fully confirmed the theoretical models and remarkably supplements the experiments on small liquid columns and on density-matched columns

    Hospital volume and outcomes for acute pulmonary embolism: Multinational population based cohort study

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    [Objectives] To evaluate the association between experience in the management of acute pulmonary embolism, reflected by hospital case volume, and mortality.[Design] Multinational population based cohort study using data from the Registro Informatizado de la Enfermedad TromboEmbólica (RIETE) registry between 1 January 2001 and 31 August 2018.[Setting] 353 hospitals in 16 countries.[Participants] 39 257 consecutive patients with confirmed diagnosis of acute symptomatic pulmonary embolism.[Main] outcome measure Pulmonary embolism related mortality within 30 days after diagnosis of the condition.[Results] Patients with acute symptomatic pulmonary embolism admitted to high volume hospitals (>40 pulmonary embolisms per year) had a higher burden of comorbidities. A significant inverse association was seen between annual hospital volume and pulmonary embolism related mortality. Admission to hospitals in the highest quarter (that is, >40 pulmonary embolisms per year) was associated with a 44% reduction in the adjusted odds of pulmonary embolism related mortality at 30 days compared with admission to hospitals in the lowest quarter (<15 pulmonary embolisms per year; adjusted risk 1.3% v 2.3%; adjusted odds ratio 0.56 (95% confidence interval 0.33 to 0.95); P=0.03). Results were consistent in all sensitivity analyses. All cause mortality at 30 days was not significantly reduced between the two quarters (adjusted odds ratio 0.78 (0.50 to 1.22); P=0.28). Survivors showed little change in the odds of recurrent venous thromboembolism (odds ratio 0.76 (0.49 to 1.19)) or major bleeding (1.07 (0.77 to 1.47)) between the low and high volume hospitals.[Conclusions] In patients with acute symptomatic pulmonary embolism, admission to high volume hospitals was associated with significant reductions in adjusted pulmonary embolism related mortality at 30 days. These findings could have implications for management strategies.Peer reviewe

    Guess the cheese flavour by the size of its holes: A cosmological test using the abundance of Popcorn voids

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    We present a new definition of cosmic void and a publicly available code with the algorithm that implements it. Underdense regions are defined as free-form objects, called popcorn voids, made from the union of spheres of maximum volume with a given joint integrated underdensity contrast.The method is inspired by the excursion-set theory and consequently no rescaling processing is needed, the removal of overlapping voids and objects with sizes below the shot noise threshold is inherent in the algorithm. The abundance of popcorn voids in the matter field can be fitted using the excursion-set theory provided the relationship between the linear density contrast of the barrier and the threshold used in void identification is modified relative to the spherical evolution model. We also analysed the abundance of voids in biased tracer samples in redshift space. We show how the void abundance can be used to measure the geometric distortions due to the assumed fiducial cosmology, in a test similar to an Alcock-Paczy\'nski test. Using the formalism derived from previous works, we show how to correct the abundance of popcorn voids for redshift-space distortion effects. Using this treatment, in combination with the excursion-set theory, we demonstrate the feasibility of void abundance measurements as cosmological probes. We obtain unbiased estimates of the target parameters, albeit with large degeneracies in the parameter space. Therefore, we conclude that the proposed test in combination with other cosmological probes has potential to improve current cosmological parameter constraints.Comment: Updated manuscript sent to the MNRAS after referee report: 16 pages, 8 figures. Corrections were made to Fig. 4, some related conclusions were modified. The main conclusions remain unchange

    Iberian cured-ham consumption improves endothelial function in healthy subjects

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    Objectives: Previous studies have shown that dietary components such as oleic acid or polyphenols exert beneficial effects on endothelium. We aimed to assess the impact of regular consumption of Iberian cured-ham (ICH) on endothelial function. Design: An open-label, randomized controlled parallel study. Setting: Volunteers recruited through advertisements at a hospital in Madrid, Spain. Participants: 102 Caucasian adults (76.8% females) aged 25-55 years, and free from cardiometabolic disease. Intervention: Participants were randomized to an ICH-enriched ad libitum diet or an ad libitum diet without ICH for 6 weeks. Subjects in ICH group were randomly provided with either acorn- or mixed-fed ICH, and followed up for an additional 6-week period under their usual diet. Measurements: Clinical parameters, biomarkers of endothelial function and oxidative stress, microvascular vasodilatory response to hyperemia and arterial stiffness were measured before and after the intervention. Results: After 6 weeks, a larger decrease in PAI-1 was observed in subjects consuming ICH compared to the Control group (-6.2±17.7 vs. 0.3±1.4 ng/ml; p=0.020). Similarly, microvascular vasodilatory response to hyperemia showed a significant increase (112.4±391.7 vs. -56.0±327.9%; p=0.007). However, neither oxidative stress, hemodynamic nor clinical parameters differed significantly over the study. Additionally, after stopping ICH consumption, improvements in PAI-1 remained for 6 additional weeks with respect to baseline (p=0.006). Conclusion: The present study demonstrates, for the first time, that regular consumption of ICH improves endothelial function in healthy adults. Strategies aimed to preserve or improve the endothelial function may have implications in vascular aging beyond the prevention of the atherothrombotic disease

    EcID. A database for the inference of functional interactions in E. coli

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    The EcID database (Escherichia coli Interaction Database) provides a framework for the integration of information on functional interactions extracted from the following sources: EcoCyc (metabolic pathways, protein complexes and regulatory information), KEGG (metabolic pathways), MINT and IntAct (protein interactions). It also includes information on protein complexes from the two E. coli high-throughput pull-down experiments and potential interactions extracted from the literature using the web services associated to the iHOP text-mining system. Additionally, EcID incorporates results of various prediction methods, including two protein interaction prediction methods based on genomic information (Phylogenetic Profiles and Gene Neighbourhoods) and three methods based on the analysis of co-evolution (Mirror Tree, In Silico 2 Hybrid and Context Mirror). EcID associates to each prediction a specifically developed confidence score. The two main features that make EcID different from other systems are the combination of co-evolution-based predictions with the experimental data, and the introduction of E. coli-specific information, such as gene regulation information from EcoCyc. The possibilities offered by the combination of the EcID database information are illustrated with a prediction of potential functions for a group of poorly characterized genes related to yeaG. EcID is available online at http://ecid.bioinfo.cnio.es

    EcID. A database for the inference of functional interactions in E. coli

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    The EcID database (Escherichia coli Interaction Database) provides a framework for the integration of information on functional interactions extracted from the following sources: EcoCyc (metabolic pathways, protein complexes and regulatory information), KEGG (metabolic pathways), MINT and IntAct (protein interactions). It also includes information on protein complexes from the two E. coli high-throughput pull-down experiments and potential interactions extracted from the literature using the web services associated to the iHOP text-mining system. Additionally, EcID incorporates results of various prediction methods, including two protein interaction prediction methods based on genomic information (Phylogenetic Profiles and Gene Neighbourhoods) and three methods based on the analysis of co-evolution (Mirror Tree, In Silico 2 Hybrid and Context Mirror). EcID associates to each prediction a specifically developed confidence score. The two main features that make EcID different from other systems are the combination of co-evolution-based predictions with the experimental data, and the introduction of E. coli-specific information, such as gene regulation information from EcoCyc. The possibilities offered by the combination of the EcID database information are illustrated with a prediction of potential functions for a group of poorly characterized genes related to yeaG. EcID is available online at http://ecid.bioinfo.cnio.es

    Multidisciplinary Prehabilitation and Postoperative Rehabilitation for Avoiding Complications in Patients Undergoing Resection of Colon Cancer: Rationale, Design, and Methodology of the ONCOFIT Study

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    ONCOFIT is a randomized clinical trial with a two-arm parallel design aimed at determining the influence of a multidisciplinary Prehabilitation and Postoperative Program (PPP) on post-surgery complications in patients undergoing resection of colon cancer. This intervention will include supervised physical exercise, dietary behavior change, and psychological support comparing its influence to the standard care. Primary and secondary endpoints will be assessed at baseline, at preoperative conditions, at the end of the PPP intervention (after 12 weeks) and 1-year post-surgery, and will include: post-surgery complications (primary endpoint); prolonged hospital length of stay; readmissions and emergency department call within 1-year after surgery; functional capacity; patient reported outcome measures targeted; anthropometry and body composition; clinical/tumor parameters; physical activity levels and sedentariness; dietary habits; other unhealthy habits; sleep quality; and fecal microbiota diversity and composition. Considering the feasibility of the present intervention in a real-life scenario, ONCOFIT will contribute to the standardization of a cost-effective strategy for preventing and improving health-related consequences in patients undergoing resection of colon cancer with an important clinical and economic impact, not only in the scientific community, but also in clinical practice.This study was funded by the University of Granada, Plan Propio de Investigación 2016-Excellence actions: Unit of Excellence on Exercise and Health (UCEES). P.C. was supported by the Margarita Salas postdoctoral grant, convened by de University of the Basque Country (UPV/EHU), funded by the Ministry of Universities of Spain and the European Union-Next Generation EU

    Evidencias de actividad glaciar durante el Dryas reciente (12, 9-11, 7 ka BP) en la Península Ibérica

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    El Dryas Reciente (Younger Dryas) (GS-1, entre 12, 9 y 11, 7 ka BP) se caracterizó por un marcado descenso de la temperatura a escala global. La consecuencia fue un re avance de los glaciares que afectó también a las cordilleras más importantes de la Península Ibérica. Este trabajo revisa la información disponible sobre la localización, evolución y extensión de tales glaciares. La actividad geomorfológica durante el Dryas Reciente en la Península Ibérica se ha identificado mediante depósitos morrénicos, umbrales rocosos pulidos por el hielo, y glaciares rocosos, datados en la mayor parte de los casos mediante métodos cosmogénicos. Los mejores ejemplos de morrenas del Dryas Reciente se localizan en los Pirineos, donde se desarrollaron cortas lenguas glaciares de hasta 4 km de longitud en los macizos más elevados y numerosos glaciares de circo. También hay evidencias de pequeños glaciares de circo y glaciares rocosos en la Cordillera Cantábrica y en el Sistema Central (sierras de Gredos y Guadarrama), como indican umbrales rocosos y depósitos morrénicos en el frente de circos glaciares. En cambio, en Sierra Nevada, en el extremo meridional de la Península Ibérica, las únicas evidencias del Younger Dryas son glaciares rocosos que se desarrollaron durante el Dryas Antiguo y estuvieron funcionales durante todo el Dryas reciente. The Younger Dryas (GS-1, entre 12, 9 y 11, 7 ka BP) was characterized by a remarkable declining in temperature at a global scale. The consequence was a moderate re-advance of glaciers that also affected the main ranges of the Iberian Peninsula. This paper reviews the available information on the location, evolution and extent of such glaciers. The geomorphological activity during the Younger Dryas in the Iberian Peninsula has been identified throughout the presence of morainic deposits (dated in most cases with cosmogenic exposure ages), rocky thresholds polished by the ice, and rock glaciers. The best examples of Younger Dryas moraines were found in the Central Pyrenees, with short ice tongues of up to 4 km in length in the highest massifs and a number of glacial cirques. There is also evidence of small cirque glaciers in the Cantabrian Range and the Central System Range (Gredos and Guadarrama sierras), as deduced by rocky thresholds and morainic deposits close to cirque headwalls. Conversely, in Sierra Nevada (southernmost sector of the Iberian Peninsula) the only evidence of the Younger Dryas is the presence of rock glaciers that were developed during the Oldest Dryas and survived during the Younger Dryas

    Reconstructing native American migrations from whole-genome and whole-exome data.

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    There is great scientific and popular interest in understanding the genetic history of populations in the Americas. We wish to understand when different regions of the continent were inhabited, where settlers came from, and how current inhabitants relate genetically to earlier populations. Recent studies unraveled parts of the genetic history of the continent using genotyping arrays and uniparental markers. The 1000 Genomes Project provides a unique opportunity for improving our understanding of population genetic history by providing over a hundred sequenced low coverage genomes and exomes from Colombian (CLM), Mexican-American (MXL), and Puerto Rican (PUR) populations. Here, we explore the genomic contributions of African, European, and especially Native American ancestry to these populations. Estimated Native American ancestry is 48% in MXL, 25% in CLM, and 13% in PUR. Native American ancestry in PUR is most closely related to populations surrounding the Orinoco River basin, confirming the Southern American ancestry of the Taíno people of the Caribbean. We present new methods to estimate the allele frequencies in the Native American fraction of the populations, and model their distribution using a demographic model for three ancestral Native American populations. These ancestral populations likely split in close succession: the most likely scenario, based on a peopling of the Americas 16 thousand years ago (kya), supports that the MXL Ancestors split 12.2kya, with a subsequent split of the ancestors to CLM and PUR 11.7kya. The model also features effective populations of 62,000 in Mexico, 8,700 in Colombia, and 1,900 in Puerto Rico. Modeling Identity-by-descent (IBD) and ancestry tract length, we show that post-contact populations also differ markedly in their effective sizes and migration patterns, with Puerto Rico showing the smallest effective size and the earlier migration from Europe. Finally, we compare IBD and ancestry assignments to find evidence for relatedness among European founders to the three populations
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