639 research outputs found
ADMP: an adaptive multicast routing protocol for mobile ad hoc networks
We present ADMP, the adaptive mesh-based multicast routing protocol, in which nodes are able to independently tune the amount of redundancy used to transmit data packets with the goal of improving the overall packet delivery ratio while keeping the retransmission overhead as low as possible. ADMP is based on a novel distributed algorithm for computing connected dominating sets. ADMP uses a single type of control packet, called multicast announcement, which is used to build the meshes of multicast groups, elect the core of each mesh and obtain two-hop neighborhood information. Using detailed simulations for different scenarios, we show that ADMP achieves similar or better reliability than two mesh-based multicast protocols that are very resilient (ODMRP and PUMA) while inducing low packet retransmission overhead.1st IFIP International Conference on Ad-Hoc NetWorkingRed de Universidades con Carreras en InformĂĄtica (RedUNCI
ADMP: an adaptive multicast routing protocol for mobile ad hoc networks
We present ADMP, the adaptive mesh-based multicast routing protocol, in which nodes are able to independently tune the amount of redundancy used to transmit data packets with the goal of improving the overall packet delivery ratio while keeping the retransmission overhead as low as possible. ADMP is based on a novel distributed algorithm for computing connected dominating sets. ADMP uses a single type of control packet, called multicast announcement, which is used to build the meshes of multicast groups, elect the core of each mesh and obtain two-hop neighborhood information. Using detailed simulations for different scenarios, we show that ADMP achieves similar or better reliability than two mesh-based multicast protocols that are very resilient (ODMRP and PUMA) while inducing low packet retransmission overhead.1st IFIP International Conference on Ad-Hoc NetWorkingRed de Universidades con Carreras en InformĂĄtica (RedUNCI
Clustering Improves the GoemansâWilliamson Approximation for the Max-Cut Problem
MAXâCUT is one of the well-studied NP-hard combinatorial optimization problems. It can be formulated as an Integer Quadratic Programming problem and admits a simple relaxation obtained by replacing the integer âspinâ variables xi by unitary vectors vâ i. The GoemansâWilliamson rounding algorithm assigns the solution vectors of the relaxed quadratic program to a corresponding integer spin depending on the sign of the scalar product vâ iâ
râ with a random vector râ . Here, we investigate whether better graph cuts can be obtained by instead using a more sophisticated clustering algorithm. We answer this question affirmatively. Different initializations of k-means and k-medoids clustering produce better cuts for the graph instances of the most well known benchmark for MAXâCUT. In particular, we found a strong correlation of cluster quality and cut weights during the evolution of the clustering algorithms. Finally, since in general the maximal cut weight of a graph is not known beforehand, we derived instance-specific lower bounds for the approximation ratio, which give information of how close a solution is to the global optima for a particular instance. For the graphs in our benchmark, the instance specific lower bounds significantly exceed the GoemansâWilliamson guarantee
PRIME: An Interest-Driven Approach to Integrated Unicast and Multicast Routing in MANETs
Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli
The active and inactive state of transcription factors in growing cells is usually directed by allosteric physicochemical signals or metabolites, which are in turn either produced in the cell or obtained from the environment by the activity of the products of effector genes. To understand the regulatory dynamics and to improve our knowledge about how transcription factors (TFs) respond to endogenous and exogenous signals in the bacterial model, Escherichia coli, we previously proposed to classify TFs into external, internal and hybrid sensing classes depending on the source of their allosteric or equivalent metabolite. Here we analyze how a cell uses its topological structures in the context of sensing machinery and show that, while feed forward loops (FFLs) tightly integrate internal and external sensing TFs connecting TFs from different layers of the hierarchical transcriptional regulatory network (TRN), bifan motifs frequently connect TFs belonging to the same sensing class and could act as a bridge between TFs originating from the same level in the hierarchy. We observe that modules identified in the regulatory network of E. coli are heterogeneous in sensing context with a clear combination of internal and external sensing categories depending on the physiological role played by the module. We also note that propensity of two-component response regulators increases at promoters, as the number of TFs regulating a target operon increases. Finally we show that evolutionary families of TFs do not show a tendency to preserve their sensing abilities. Our results provide a detailed panorama of the topological structures of E. coli TRN and the way TFs they compose off, sense their surroundings by coordinating responses
Transcriptional regulation shapes the organization of genes on bacterial chromosomes
Transcription factors (TFs) are the key elements responsible for controlling the expression of genes in bacterial genomes and when visualized on a genomic scale form a dense network of transcriptional interactions among themselves and with other protein coding genes. Although the structure of transcriptional regulatory networks (TRNs) is well understood, it is not clear what constrains govern them. Here, we explore this question using the TRNs of model prokaryotes and provide a link between the transcriptional hierarchy of regulons and their genome organization. We show that, to drive the kinetics and concentration gradients, TFs belonging to big and small regulons, depending on the number of genes they regulate, organize themselves differently on the genome with respect to their targets. We then propose a conceptual model that can explain how the hierarchical structure of TRNs might be ultimately governed by the dynamic biophysical requirements for targeting DNA-binding sites by TFs. Our results suggest that the main parameters defining the position of a TF in the network hierarchy are the number and chromosomal distances of the genes they regulate and their protein concentration gradients. These observations give insights into how the hierarchical structure of transcriptional networks can be encoded on the chromosome to drive the kinetics and concentration gradients of TFs depending on the number of genes they regulate and could be a common theme valid for other prokaryotes, proposing the role of transcriptional regulation in shaping the organization of genes on a chromosome
Strange particle production in proton-proton collisions at TeV with ALICE at the LHC
The production of mesons containing strange quarks (K, ) and both
singly and doubly strange baryons (, Anti-, and
+Anti-) are measured at central rapidity in pp collisions at
= 0.9 TeV with the ALICE experiment at the LHC. The results are
obtained from the analysis of about 250 k minimum bias events recorded in 2009.
Measurements of yields (dN/dy) and transverse momentum spectra at central
rapidities for inelastic pp collisions are presented. For mesons, we report
yields () of 0.184 0.002 stat. 0.006 syst. for K and
0.021 0.004 stat. 0.003 syst. for . For baryons, we find
= 0.048 0.001 stat. 0.004 syst. for , 0.047
0.002 stat. 0.005 syst. for Anti- and 0.0101 0.0020 stat.
0.0009 syst. for +Anti-. The results are also compared with
predictions for identified particle spectra from QCD-inspired models and
provide a baseline for comparisons with both future pp measurements at higher
energies and heavy-ion collisions.Comment: 33 pages, 21 captioned figures, 10 tables, authors from page 28,
published version, figures at
http://aliceinfo.cern.ch/ArtSubmission/node/387
Elliptic flow of charged particles in Pb-Pb collisions at 2.76 TeV
We report the first measurement of charged particle elliptic flow in Pb-Pb
collisions at 2.76 TeV with the ALICE detector at the CERN Large Hadron
Collider. The measurement is performed in the central pseudorapidity region
(||<0.8) and transverse momentum range 0.2< < 5.0 GeV/. The
elliptic flow signal v, measured using the 4-particle correlation method,
averaged over transverse momentum and pseudorapidity is 0.087 0.002
(stat) 0.004 (syst) in the 40-50% centrality class. The differential
elliptic flow v reaches a maximum of 0.2 near = 3
GeV/. Compared to RHIC Au-Au collisions at 200 GeV, the elliptic flow
increases by about 30%. Some hydrodynamic model predictions which include
viscous corrections are in agreement with the observed increase.Comment: 10 pages, 4 captioned figures, published version, figures at
http://aliceinfo.cern.ch/ArtSubmission/node/389
Two-pion Bose-Einstein correlations in central Pb-Pb collisions at = 2.76 TeV
The first measurement of two-pion Bose-Einstein correlations in central Pb-Pb
collisions at TeV at the Large Hadron Collider is
presented. We observe a growing trend with energy now not only for the
longitudinal and the outward but also for the sideward pion source radius. The
pion homogeneity volume and the decoupling time are significantly larger than
those measured at RHIC.Comment: 17 pages, 5 captioned figures, 1 table, authors from page 12,
published version, figures at
http://aliceinfo.cern.ch/ArtSubmission/node/388
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