168 research outputs found
Adsorbed protein detection by scanning electrochemical microscopy
A scanning electrochemical microscopy (SECM) protein detection methodology has been developed based on the tagging of free cysteines and other nucleophiles in proteins and peptides by benzoquinone. The tagged proteins are detected by the mediated reduction of benzoquinone with a redox species produced electrochemically at the SECM tip. After careful optimization, a sensitivity in the low ng mm 2 range was reached for bovine serum albumin. One of the major advantages of the present technique is that the selectivity of the protein tagging can be tuned by changing the pH of the reaction media. Depending on the requirements, cysteine selective or general detection can therefore be achieved with a high sensitivity. As a proof of concept, this technique was applied to the detection of protein spots and to the imaging of human fingerprints and further compared to the actual SECM state-of-art approach
SECM photography
A novel strategy for imaging commercial black-and-white negative photo films by scanning electrochemical microscopy (SECM) is demonstrated. The imaging is based on using IrCl3 6 as the redox mediator to dissolve silver grains. The SECM probe is biased at a sufficient constant anodic potential (0.8 V vs. Ag QRE) to oxidize IrCl3 6 under diffusion control. SECM images of a patterned band array (2.8 mm 3 mm) and of an ‘‘EPFL” logo (8.6 mm 7 mm) have been recorded with a high resolution from the black-and-white negative photo films. The factors relevant to the quality of images are discussed
Estimation of wood volume and height of olive tree plantations using airborne discrete-return LiDAR data
The aim of this study is to analyze methodologies based on airborne LiDAR (light detection and ranging) technology of low pulse density points (0.5m(-2)) for height and volume quantification of olive trees in Viver (Spain). A total of 29 circular plots, each with a radius of 20m, were sampled and their volumes and heights were obtained by dendrometric methods. For these estimations, several statistics derived from LiDAR data were calculated in each plot. Regression models were used to predict volume and height. The results showed good performance for estimating volume (R-2=0.70) and total height (R-2=0.67).The authors appreciate the financial support provided by the Spanish Ministerio de Ciencia e Innovacion (Ministry for Science & Innovation) within the framework of the project AGL2010-15334 and by the Vice-Rectorate for Research of the Universitat Politecnica de Valencia [Grant PAID-06-12-3297; SP20120534].Estornell Cremades, J.; Velázquez Martí, B.; López Cortés, I.; Salazar Hernández, DM.; Fernández-Sarría, A. (2014). Estimation of wood volume and height of olive tree plantations using airborne discrete-return LiDAR data. GIScience and Remote Sensing. 51(1):17-29. https://doi.org/10.1080/15481603.2014.883209S1729511Estornell, J., Ruiz, L. A., Velázquez-Martí, B., & Fernández-Sarría, A. (2011). Estimation of shrub biomass by airborne LiDAR data in small forest stands. Forest Ecology and Management, 262(9), 1697-1703. doi:10.1016/j.foreco.2011.07.026García, M., Riaño, D., Chuvieco, E., & Danson, F. M. (2010). Estimating biomass carbon stocks for a Mediterranean forest in central Spain using LiDAR height and intensity data. Remote Sensing of Environment, 114(4), 816-830. doi:10.1016/j.rse.2009.11.021Hyyppa, J., Kelle, O., Lehikoinen, M., & Inkinen, M. (2001). A segmentation-based method to retrieve stem volume estimates from 3-D tree height models produced by laser scanners. IEEE Transactions on Geoscience and Remote Sensing, 39(5), 969-975. doi:10.1109/36.921414Kim, Y., Yang, Z., Cohen, W. B., Pflugmacher, D., Lauver, C. L., & Vankat, J. L. (2009). Distinguishing between live and dead standing tree biomass on the North Rim of Grand Canyon National Park, USA using small-footprint lidar data. Remote Sensing of Environment, 113(11), 2499-2510. doi:10.1016/j.rse.2009.07.010Moorthy, I., Miller, J. R., Berni, J. A. J., Zarco-Tejada, P., Hu, B., & Chen, J. (2011). Field characterization of olive (Olea europaea L.) tree crown architecture using terrestrial laser scanning data. Agricultural and Forest Meteorology, 151(2), 204-214. doi:10.1016/j.agrformet.2010.10.005Næsset, E. (2004). Accuracy of forest inventory using airborne laser scanning: evaluating the first nordic full-scale operational project. Scandinavian Journal of Forest Research, 19(6), 554-557. doi:10.1080/02827580410019544Popescu, S. C. (2007). Estimating biomass of individual pine trees using airborne lidar. Biomass and Bioenergy, 31(9), 646-655. doi:10.1016/j.biombioe.2007.06.022Popescu, S. C., Wynne, R. H., & Nelson, R. F. (2002). Estimating plot-level tree heights with lidar: local filtering with a canopy-height based variable window size. Computers and Electronics in Agriculture, 37(1-3), 71-95. doi:10.1016/s0168-1699(02)00121-7Velázquez-Martí, B., Estornell, J., López-Cortés, I., & Martí-Gavilá, J. (2012). Calculation of biomass volume of citrus trees from an adapted dendrometry. Biosystems Engineering, 112(4), 285-292. doi:10.1016/j.biosystemseng.2012.04.011Velázquez-Martí, B., Fernández-González, E., Estornell, J., & Ruiz, L. A. (2010). Dendrometric and dasometric analysis of the bushy biomass in Mediterranean forests. Forest Ecology and Management, 259(5), 875-882. doi:10.1016/j.foreco.2009.11.027Velázquez-Martí, B., Fernández-González, E., López-Cortés, I., & Salazar-Hernández, D. M. (2011). Quantification of the residual biomass obtained from pruning of trees in Mediterranean olive groves. Biomass and Bioenergy, 35(7), 3208-3217. doi:10.1016/j.biombioe.2011.04.042Yu, X., Hyyppä, J., Kaartinen, H., & Maltamo, M. (2004). Automatic detection of harvested trees and determination of forest growth using airborne laser scanning. Remote Sensing of Environment, 90(4), 451-462. doi:10.1016/j.rse.2004.02.00
A note on comonotonicity and positivity of the control components of decoupled quadratic FBSDE
In this small note we are concerned with the solution of Forward-Backward
Stochastic Differential Equations (FBSDE) with drivers that grow quadratically
in the control component (quadratic growth FBSDE or qgFBSDE). The main theorem
is a comparison result that allows comparing componentwise the signs of the
control processes of two different qgFBSDE. As a byproduct one obtains
conditions that allow establishing the positivity of the control process.Comment: accepted for publicatio
Charge separation relative to the reaction plane in Pb-Pb collisions at TeV
Measurements of charge dependent azimuthal correlations with the ALICE
detector at the LHC are reported for Pb-Pb collisions at TeV. Two- and three-particle charge-dependent azimuthal correlations in
the pseudo-rapidity range are presented as a function of the
collision centrality, particle separation in pseudo-rapidity, and transverse
momentum. A clear signal compatible with a charge-dependent separation relative
to the reaction plane is observed, which shows little or no collision energy
dependence when compared to measurements at RHIC energies. This provides a new
insight for understanding the nature of the charge dependent azimuthal
correlations observed at RHIC and LHC energies.Comment: 12 pages, 3 captioned figures, authors from page 2 to 6, published
version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/286
Anisotropic flow of charged hadrons, pions and (anti-)protons measured at high transverse momentum in Pb-Pb collisions at TeV
The elliptic, , triangular, , and quadrangular, , azimuthal
anisotropic flow coefficients are measured for unidentified charged particles,
pions and (anti-)protons in Pb-Pb collisions at TeV
with the ALICE detector at the Large Hadron Collider. Results obtained with the
event plane and four-particle cumulant methods are reported for the
pseudo-rapidity range at different collision centralities and as a
function of transverse momentum, , out to GeV/.
The observed non-zero elliptic and triangular flow depends only weakly on
transverse momentum for GeV/. The small dependence
of the difference between elliptic flow results obtained from the event plane
and four-particle cumulant methods suggests a common origin of flow
fluctuations up to GeV/. The magnitude of the (anti-)proton
elliptic and triangular flow is larger than that of pions out to at least
GeV/ indicating that the particle type dependence persists out
to high .Comment: 16 pages, 5 captioned figures, authors from page 11, published
version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/186
Centrality dependence of charged particle production at large transverse momentum in Pb-Pb collisions at TeV
The inclusive transverse momentum () distributions of primary
charged particles are measured in the pseudo-rapidity range as a
function of event centrality in Pb-Pb collisions at
TeV with ALICE at the LHC. The data are presented in the range
GeV/ for nine centrality intervals from 70-80% to 0-5%.
The Pb-Pb spectra are presented in terms of the nuclear modification factor
using a pp reference spectrum measured at the same collision
energy. We observe that the suppression of high- particles strongly
depends on event centrality. In central collisions (0-5%) the yield is most
suppressed with at -7 GeV/. Above
GeV/, there is a significant rise in the nuclear modification
factor, which reaches for GeV/. In
peripheral collisions (70-80%), the suppression is weaker with almost independently of . The measured nuclear
modification factors are compared to other measurements and model calculations.Comment: 17 pages, 4 captioned figures, 2 tables, authors from page 12,
published version, figures at
http://aliceinfo.cern.ch/ArtSubmission/node/284
Transverse sphericity of primary charged particles in minimum bias proton-proton collisions at , 2.76 and 7 TeV
Measurements of the sphericity of primary charged particles in minimum bias
proton--proton collisions at , 2.76 and 7 TeV with the ALICE
detector at the LHC are presented. The observable is linearized to be collinear
safe and is measured in the plane perpendicular to the beam direction using
primary charged tracks with GeV/c in . The
mean sphericity as a function of the charged particle multiplicity at
mid-rapidity () is reported for events with different
scales ("soft" and "hard") defined by the transverse momentum of the leading
particle. In addition, the mean charged particle transverse momentum versus
multiplicity is presented for the different event classes, and the sphericity
distributions in bins of multiplicity are presented. The data are compared with
calculations of standard Monte Carlo event generators. The transverse
sphericity is found to grow with multiplicity at all collision energies, with a
steeper rise at low , whereas the event generators show the
opposite tendency. The combined study of the sphericity and the mean with multiplicity indicates that most of the tested event generators
produce events with higher multiplicity by generating more back-to-back jets
resulting in decreased sphericity (and isotropy). The PYTHIA6 generator with
tune PERUGIA-2011 exhibits a noticeable improvement in describing the data,
compared to the other tested generators.Comment: 21 pages, 9 captioned figures, 3 tables, authors from page 16,
published version, figures from
http://aliceinfo.cern.ch/ArtSubmission/node/308
Measurement of charm production at central rapidity in proton-proton collisions at TeV
The -differential production cross sections of the prompt (B
feed-down subtracted) charmed mesons D, D, and D in the rapidity
range , and for transverse momentum GeV/, were
measured in proton-proton collisions at TeV with the ALICE
detector at the Large Hadron Collider. The analysis exploited the hadronic
decays DK, DK, DD, and their charge conjugates, and was performed on a
nb event sample collected in 2011 with a
minimum-bias trigger. The total charm production cross section at TeV and at 7 TeV was evaluated by extrapolating to the full phase space
the -differential production cross sections at TeV
and our previous measurements at TeV. The results were compared
to existing measurements and to perturbative-QCD calculations. The fraction of
cdbar D mesons produced in a vector state was also determined.Comment: 20 pages, 5 captioned figures, 4 tables, authors from page 15,
published version, figures at
http://aliceinfo.cern.ch/ArtSubmission/node/307
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