12 research outputs found
Table 1. Author response
- Author
- 1000 Genomes Project Consortium
- Albers
- Boland
- Bunting
- Campbell
- Chen
- Chen
- Deng
- Denver
- Dietmaier
- Donehower
- Dorard
- Drmanac
- Ellegren
- Farmer
- Fischer
- Ham
- Hampel
- Hampel
- Hampel
- Haw
- Hewish
- Hodgkinson
- Hombauer
- Jiricny
- Kandoth
- Kim
- Kong
- Koren
- Kunkel
- Li
- Martin
- Martin
- McCabe
- McKenna
- Metzger-Filho
- Miquel
- Montgomery
- Murai
- Ng
- Nik-Zainal
- Palles
- Park
- Parsons
- Peltomaki
- Pena-Diaz
- Pinol
- Pleasance
- Pleasance
- Quinlan
- Reumers
- Richman
- Saint-Ruf
- Shell
- Smith
- Song
- Stamatoyannopoulos
- Takahashi
- Tan
- TCGA
- Tie
- Van Loo
- Vichai
- Vilar
- Watson
- Wheeler
- Yoon
- Zook
- Publication venue
- 'eLife Sciences Publications, Ltd'
- Publication date
- Field of study
Get PDFStimulus-dependent differences in signalling regulate epithelial-mesenchymal plasticity and change the effects of drugs in breast cancer cell lines
- Author
- A Bonnomet
- A Guerrab El
- A Jayachandran
- A Migliaccio
- A Wells
- AG Herreros de
- Andrew Redfern
- AP Morel
- B Willipinski-Stapelfeldt
- BJ Denderen van
- C Knox
- C Qu
- C Ting-Chao
- Cameron P Bracken
- CJ Chang
- CJ Creighton
- D Beisser
- D Sarrio
- E Avizienyte
- E Foubert
- EB Garon
- Edmund J Crampin
- Erik W Thompson
- Eva Tomaskovic-Crook
- EW Thompson
- EW Thompson
- F Hochgrafe
- F Nie
- G Moreno-Bueno
- GJ Sabnis
- GM Yanochko
- H Chen
- H Hugo
- H Kim
- H Masuda
- HA Burris 3rd
- HJ Hugo
- HJ Hugo
- HW Lo
- I Vivanco
- Ian Street
- IB Fuchs
- IB Roninson
- J Foley
- J Li
- J Matsuoka
- J Rinehart
- J Whyte
- J Yang
- JE Visvader
- JJ Hornberg
- JL Duband
- JM Lee
- Joseph Cursons
- JP Thiery
- JP Thiery
- JR Dry
- JS Duncan
- K Lundgren
- K Polyak
- K Stemke-Hale
- Karl-Johan Leuchowius
- KS Saini
- L Minafra
- L Zhang
- L Zhao
- LA Smyth
- LM Heiser
- M Al-Hajj
- M Jo
- M Saxena
- M Wartenberg
- M Yunokawa
- MA Nieto
- Mark Waltham
- Melissa J Davis
- MF Ware
- MH Yang
- MH Yang
- MJ Cowley
- ML Ackland
- ML Ackland
- MM McKay
- Momeneh Foroutan
- MS Cline
- MW Klymkowsky
- N Normanno
- NA Said
- NM Baker
- NP Gunasinghe
- OK Mirzoeva
- PA Candy
- PA Gregory
- PS Steeg
- Q Cheng
- R Avraham
- RH Whitehead
- RH Whitehead
- RH Whitehead
- RM Larive
- RM Neve
- RS Finn
- S Kashiwagi
- S Lamouille
- S Miyakis
- S Shin
- S Shin
- S Strese
- S Thomson
- SA Mani
- SJ Wang
- SM Lim
- SS Gayle
- SY Shvartsman
- T Blick
- TCGA Project
- V Yadav
- VG Cooke
- W Han
- Y Fujita
- Y Katoh
- YR Chin
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Get PDFPossible Human Papillomavirus 38 Contamination of Endometrial Cancer RNA Sequencing Samples in The Cancer Genome Atlas Database
- Author
- Publication venue
- 'American Society for Microbiology'
- Publication date
- Field of study
No full textValidation of the Lung Subtyping Panel in Multiple Fresh-Frozen and Formalin-Fixed, Paraffin-Embedded Lung Tumor Gene Expression Data Sets
- Author
- [CLCGP and NGM] Clinical Lung Cancer Genome Project and Network Genomic Medicine
- [IGC] International Genomics Consortium
- [TCGA] The Cancer Genome Atlas Research Network
- [TCGA] The Cancer Genome Atlas Research Network
- American Cancer Society
- Bild
- Faruki
- Genentech
- Grilley-Olson
- Hayes
- Hubbell
- Lee
- Li
- Lilly.
- Rekhtman
- Rekhtman
- Roepman
- Rossi
- Rousseaux
- Tang
- Thunnissen
- Thunnissen
- Thunnissen
- Travis
- Travis
- Travis
- Travis
- Wilkerson
- Wilkerson
- Wilkerson
- Yang
- Publication venue
- 'Archives of Pathology and Laboratory Medicine'
- Publication date
- Field of study
No full textSeqOthello: querying RNA-seq experiments at scale
- Author
- 1000 Genomes Project Consortium
- A Broder
- A Dobin
- A McPherson
- A Nellore
- B Solomon
- B Solomon
- BH Bloom
- BJ Haas
- BS Majewski
- C Sun
- CE Shannon
- Chen Qian
- Daehwan Kim
- DD Dolle
- Eamonn Magner
- Erik Lehnert
- F Abate
- G Holley
- G Marçais
- H Ge
- J Harrow
- Jinpeng Liu
- Jinze Liu
- K Chen
- K Yoshihara
- Kai Wang
- L Collado-Torres
- Lau
- M Benelli
- M Pertea
- MG Grabherr
- MK Iyer
- NCBI Resource Coordinators
- R Petryszak
- S Kumar
- Tanya Barrett
- TCGA
- W Torres-García
- Wenlong Jia
- Xinan Liu
- Xinan Liu
- Y Li
- Ye Yu
- Ye Yu
- Yi Zhang
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
No full textAuthor response table 1.
- Author
- Agresti
- Alexandrov
- Alexandrov
- An
- Bates
- Begg
- Benjamini
- Berens
- Bertl
- Burdelski
- Chen
- Cornish-Bowden
- Cosmic
- Coventry
- Dees
- Denisova
- Diederichs
- Ding
- Drake
- Eddelbuettel
- Ehrenberg
- Eicheler
- ENCODE Project Consortium
- Forbes
- Fredriksson
- GENCODE
- Gerstein
- Gill
- Gonzalez-Perez
- Grinstead
- GTEx Consortium
- Heidenreich
- Hockla
- Horn
- Huang
- Hudson
- Jiang
- Kalikin
- Kaplan
- Kent
- Khurana
- Khurana
- Lanzós
- Lawrence
- Lee
- Lochovsky
- Ma
- Marsit
- Marx
- Melton
- Mularoni
- Pettersen
- Pettersen
- Polak
- Pollard
- Pon
- R Development Core Team
- Reimand
- Reva
- Sabarinathan
- Samur
- Schafer
- Schweder
- Srebrow
- Stratton
- Tamborero
- TCGA Data Portal
- Tools to Make Developing R Packages Easier
- Touzet
- UCSC Genome Browser
- Van Rhijn
- Varley
- Vinagre
- Visnes
- Wei
- Weinhold
- Weinstein
- Yang
- Zhou
- Publication venue
- 'eLife Sciences Publications, Ltd'
- Publication date
- Field of study
No full textPertInInt: An Integrative, Analytical Approach to Rapidly Uncover Cancer Driver Genes with Perturbed Interactions and Functionalities
- Author
- Adzhubei
- Bailey
- Banerji
- Berman
- Capra
- Carter
- Chang
- Chin
- Cho
- Davoli
- de Groen
- Dees
- Delgado
- Ding
- Eddy
- Engin
- Fan
- Finn
- Forbes
- Futreal
- Gao
- Ghersi
- Gress
- Grossman
- Hoadley
- International Cancer Genome Consortium
- Jassal
- Jeggo
- Kamburov
- Kandoth
- Kar
- Khurana
- Kobren
- Korthauer
- Lawrence
- Lawrence
- Lek
- McCubrey
- McGranahan
- McGranahan
- Melloni
- Meyer
- Mitchell
- Mootha
- Mularoni
- Munro
- Ng
- Niknafs
- Nishi
- Niu
- Peterson
- Pletscher-Frankild
- Porta-Pardo
- Porta-Pardo
- Porta-Pardo
- Przytycki
- Raimondi
- Reimand
- Reva
- Ryslik
- Ryslik
- Ryslik
- Sanchez-Vega
- Satelli
- Schaub
- Seiler
- Shannon
- Shihab
- Silverbush
- Stehr
- Subramanian
- Tamborero
- TCGA Research Network
- The 1000 Genomes Project Consortium
- Tokheim
- Tokheim
- Torkamani
- Vogelstein
- Ye
- Zaykin
- Zeng
- Zhang
- Zhao
- Publication venue
- 'Elsevier BV'
- Publication date
- Field of study
No full textDevelopment of somatic mutation signatures for risk stratification and prognosis in lung and colorectal adenocarcinomas
- Author
- A Idbaih
- A Ooki
- AACR Project GENIE Consortium
- B Vogelstein
- Bin Jiang
- Cancer Genome Atlas Research Network
- CH An
- DC Koboldt
- DE Larson
- H-K Ko
- HK Sanoff
- I Hlavata
- J Waaler
- J-A O’Reilly
- Jicai Zhang
- K Cibulskis
- L Liu
- L Sun
- L Terrin
- M Biancolella
- M Kawada
- M Morvan Le
- Mark Menor
- MC Boelens
- ML Kuijjer
- MS Lawrence
- N Barasch
- Network TCGA
- P González-Arriaga
- RC Boswell-Casteel
- RC Wang
- RL Siegel
- S L’Espérance
- S Tang
- SY Lee
- T Liu
- T Rajkumar
- T Tagi
- T-H Ou Yang
- TZ Parris
- W Bi
- W Xue
- X Liao
- X-W Zhang
- Y Fan
- Y Li
- Y Yang
- Y Yuan
- Y Zhao
- Y Zhu
- Y-H Hu
- Yong Zhu
- Youping Deng
- Yu Wang
- Z He
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
No full textMolecular Evolution of Early-Onset Prostate Cancer Identifies Molecular Risk Markers and Clinical Trajectories
- Author
- 1000 Genomes Project Consortium
- Adrian M. Stütz
- Alexandrov
- Alexandrov
- Alfonso Urbanucci
- Alicia Malewska
- Aran
- Aryee
- Asangani
- Assenov
- Barfeld
- Barron
- Benedikt Brors
- Benjamin Raeder
- Bhasin
- Boutros
- Brocks
- Börno
- Carter
- Chae
- Chan
- Chan
- Chen
- Chen
- Chen
- Chris Lawerenz
- Christina Koop
- Christof von Kalle
- Christoph Plass
- Clarissa Feuerstein
- Clarissa Gerhauser
- Claudia Hube-Magg
- Daniel Hübschmann
- Daniela Schilling
- Desper
- Dieter Weichenhan
- Dmitry Gordenin
- Doreen Heckmann
- Douglas W. Strand
- Durand
- Erbersdobler
- Ernst
- Espiritu
- Etsehiwot G. Girma
- Eva Reisinger
- Eva-Maria Schmitz
- Fagoonee
- Favero
- Francesco Favero
- Fraser
- Gervaise H. Henry
- Guido Sauter
- Hans-Jörg Warnatz
- Hartwig Huland
- Henry
- Hnisz
- Holger Sültmann
- Houseman
- Ishii
- Ishwaran
- Jan Meiners
- Jan O. Korbel
- Jeong
- Jhun
- Jiang
- Joachim Weischenfeldt
- Josephine D. Hendriksen
- Kluth
- Kononen
- Kron
- Lars Feuerbach
- Lecca
- Leszek J. Klimczak
- Lisa-Marie Böttcher
- Locke
- Marie-Laure Yaspo
- Markus Graefen
- Martina Kluth
- Massie
- Matthias Schlesner
- Middlebrooks
- Mortazavi
- Myers
- Na
- Natalie Saini
- Nik-Zainal
- Nik-Zainal
- Nikos Sidiropoulos
- Olga Bogatyrova
- Pageaud
- Palanisamy
- Parisi
- Paul C. Boutros
- Pavlo Lutsik
- Planche
- Pound
- Pritchard
- Quinlan
- Ramazzotti
- Rao
- Rausch
- Reka Toth
- Robert G. Bristow
- Roberts
- Roberts
- Roberts
- Robinson
- Rochette
- Roland Eils
- Ronald Simon
- Sebastian M. Waszak
- Sharan
- Sotiriou
- Strand
- Stuart
- Swanton
- Sören Matzk
- Taberlay
- Takafumi N. Yamaguchi
- Tamborero
- Taylor
- TCGA
- Teschendorff
- Therneau
- Thomas Risch
- Thorsten Schlomm
- Tomlins
- Urbanucci
- Vladimir Kuryshev
- Vyacheslav Amstislavskiy
- Wang
- Weischenfeldt
- Weischenfeldt
- Wise
- Yan
- Yassen Assenov
- Yu
- Publication venue
- 'Elsevier BV'
- Publication date
- Field of study
No full textIlluminating the noncoding genome in cancer
- Author
- A Boija
- A Kundaje
- A Parolia
- AD Tang
- AP Boyle
- AR Morton
- AS Weintraub
- B Artegiani
- B Gu
- B Nabet
- B Vogelstein
- BJ Abraham
- BR Sabari
- C Kandoth
- D Gao
- D Hanahan
- D Herranz
- D Hnisz
- D Hnisz
- D Hnisz
- D Perera
- D Tuveson
- DA Quigley
- DP Bartel
- DY Takeda
- E Lieberman-Aiden
- E Rheinbay
- EA Shima
- EJ Adams
- EM Liu
- ENCODE Project Consortium.
- EP Nora
- F Liu
- F Supek
- F Yue
- FW Huang
- G Teng
- GE Winter
- GM Shankar
- GXY Zheng
- H Carter
- H Suzuki
- HA Rees
- I Cortés-Ciriano
- I Ulitsky
- ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium.
- IK Sur
- IM Derrington
- J Barretina
- J Battey
- J Eid
- J George
- J Joung
- J Lovén
- J Pulecio
- J Shi
- J Weischenfeldt
- J Zhao
- JB Wright
- JD Buenrostro
- JE Bradner
- JE Moore
- JL Rinn
- JM Dowen
- JN Burton
- JR Brahmer
- JR Dixon
- JR Dixon
- JR Huyghe
- JT Hua
- JT Neal
- K Kataoka
- K Kim
- KJ Kron
- KM Sakamoto
- L Harewood
- LA Garraway
- LA Gilbert
- LS Qi
- M Gabay
- M Ghandi
- M Imielinski
- M Peifer
- MA Schaub
- MH Bailey
- MJ Garnett
- MM Pomerantz
- MR Corces
- MR Mansour
- MS Lawrence
- MS Lawrence
- MW Snyder
- N Kwiatkowski
- O Kilpivaara
- P Bandopadhayay
- P Gao
- P Mazrooei
- P Priestley
- P Rathert
- PA Northcott
- PI Thakore
- PJ Killela
- PJ Stephens
- PS Choi
- R Buisson
- R Cowper-Sal-lari
- R Katainen
- RE Thurman
- RJA Bell
- S Djebali
- S Gröschel
- S Horn
- S Shuai
- S Wu
- S Zhou
- SA Tomlins
- SC Akıncılar
- SC Baca
- SC Mack
- SD Bailey
- SD Bailey
- SF Boj
- SG Durkin
- SJ Liu
- SK Knutson
- SL Topalian
- SR Viswanathan
- SSP Rao
- SW Cho
- SY Shen
- T Gaj
- T Nagano
- T Sato
- TI Zack
- TW Glover
- U Ben-David
- V Ramani
- WA Flavahan
- WA Flavahan
- WA Flavahan
- WA Whyte
- X Li
- X Zhang
- X Zhang
- X Zhang
- X Zhang
- Y Drier
- Y Iwai
- YA Guo
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
No full text
