Aristonectes quiriquinensis, sp. nov., a new highly derived elasmosaurid from the upper Maastrichtian of central Chile

This paper describes a new species of elasmosaurid plesiosaur, Aristonectes quiriquinensis, sp. nov., based on a partial skeleton recovered from upper Maastrichtian beds of the Quiriquina Formation of central Chile. The material described here consists of two skeletons, one collected near the village of Cocholgue, and a second juvenile specimen from Quiriquina Island. Prior to these finds, Aristonectes was viewed as a monospecific genus, including only the enigmatic Aristonectes parvidens, the holotype of which consists of an incomplete skull and incomplete postcranium. Other material referred to the genus includes an incomplete juvenile skull and other postcranial material from the upper Maastrichtian of Antarctica, as well as a partial skull from the Quiriquina Formation of central Chile. The relationships of Aristonectes have been controversial, with competing theories assigning the genus to Cryptoclididae, Elasmosauridae, and Aristonectidae; however, there is a developing consensus that Aristonectes is a derived elasmosaurid, and this paper gives strong evidence for this view. Comparison of the specimen here studied with the holotype of A. parvidens demonstrates that A. quiriquinensis is a distinct species. The completeness of the adult skeleton allows the first confident size estimates for adult Aristonectes. It is a large plesiosaurian with a relatively large skull with numerous homodont teeth, a moderately long and laterally compressed neck, and relatively narrow trunk, with slender and elongate forelimbs. The two specimens are restricted to the upper Maastrichtian of central Chile, posing questions concerning the austral circumpolar distribution of different elasmosaurids towards the end of the Cretaceous.Fil: Otero, Rodrigo A.. Universidad de Chile; ChileFil: Soto Acuña, Sergio. Museo Nacional de Historia Natural de Santiago; Chile. Universidad de Chile; ChileFil: O'Keefe, Frank Robin. Marshall University; Estados UnidosFil: O'gorman, Jose Patricio. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata; Argentina. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo; Argentina. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División Paleontología Vertebrados; ArgentinaFil: Stinnesbeck, Wolfgang. Heidelberg University; AlemaniaFil: Suárez, Mario E.. Museo Nacional de Historia Natural de Santiago; Chile. Universidad de Chile; ChileFil: Rubilar-Rogers, David. Museo Nacional de Historia Natural de Santiago; Chile. Universidad de Chile; ChileFil: Salazar, Christian. Museo Nacional de Historia Natural de Santiago; Chile. Universidad de Chile; ChileFil: Quinzio Sinn, Luis Arturo. Universidad de Concepción; Chil

Modular Architecture for a Resilient Extensible SmallSat (MARES)

CubeSats and SmallSats have seen increasing success in Low Earth Orbit (LEO). However, there is a desire to send small, low cost missions beyond LEO into harsher environments. Additionally, most bus architectures do not currently have the on-board processing capa-bilities to handle high-speed science data and autonomous operations. MARES, currently under development at NASA’s Goddard Space Flight Center, is a capabilities driven design and architecture with an emphasis on reliability, scalability, and high performance process-ing. Its applicability is broad including SmallSat missions, CubeSat missions, and high performance instrument processors. The highly integrated architecture reduces mass, volume, and power but still provides the flexibility of a modular system. Mission critical functions are handled by the Command and Data Handling (C&DH) Processor and Auxiliary cards, which are radiation hardened up to 100krad. SpaceCube™ Mini 3 processor card is primarily used for instrument data processing but its versatility and processing power provides a digital platform to reduce the SWaP of components and applications such as above-the-constellation GPS, software defined radio and LIDAR. This can be achieved by utilizing the same Mini card for various applications but multiple units can be utilized on the same bus if needed via a backplane design for the bus avionics. The catalog of new cards and features for MARES continues to grow, and the architecture can be expanded further with the design of mission-specific cards that plug into the same backplane as the rest of the bus. Standardized backplane configurations will reduce resources spent on customization and ensure a robust and compatible system

Gradual evolution of allopolyploidy in Arabidopsis suecica.

Most diploid organisms have polyploid ancestors. The evolutionary process of polyploidization is poorly understood but has frequently been conjectured to involve some form of 'genome shock', such as genome reorganization and subgenome expression dominance. Here we study polyploidization in Arabidopsis suecica, a post-glacial allopolyploid species formed via hybridization of Arabidopsis thaliana and Arabidopsis arenosa. We generated a chromosome-level genome assembly of A. suecica and complemented it with polymorphism and transcriptome data from all species. Despite a divergence around 6 million years ago (Ma) between the ancestral species and differences in their genome composition, we see no evidence of a genome shock: the A. suecica genome is colinear with the ancestral genomes; there is no subgenome dominance in expression; and transposon dynamics appear stable. However, we find changes suggesting gradual adaptation to polyploidy. In particular, the A. thaliana subgenome shows upregulation of meiosis-related genes, possibly to prevent aneuploidy and undesirable homeologous exchanges that are observed in synthetic A. suecica, and the A. arenosa subgenome shows upregulation of cyto-nuclear processes, possibly in response to the new cytoplasmic environment of A. suecica, with plastids maternally inherited from A. thaliana. These changes are not seen in synthetic hybrids, and thus are likely to represent subsequent evolution

Mapping Species Composition of Forests and Tree Plantations in Northeastern Costa Rica with an Integration of Hyperspectral and Multitemporal Landsat Imagery

An efficient means to map tree plantations is needed to detect tropical land use change and evaluate reforestation projects. To analyze recent tree plantation expansion in northeastern Costa Rica, we examined the potential of combining moderate-resolution hyperspectral imagery (2005 HyMap mosaic) with multitemporal, multispectral data (Landsat) to accurately classify (1) general forest types and (2) tree plantations by species composition. Following a linear discriminant analysis to reduce data dimensionality, we compared four Random Forest classification models: hyperspectral data (HD) alone; HD plus interannual spectral metrics; HD plus a multitemporal forest regrowth classification; and all three models combined. The fourth, combined model achieved overall accuracy of 88.5%. Adding multitemporal data significantly improved classification accuracy (p less than 0.0001) of all forest types, although the effect on tree plantation accuracy was modest. The hyperspectral data alone classified six species of tree plantations with 75% to 93% producer's accuracy; adding multitemporal spectral data increased accuracy only for two species with dense canopies. Non-native tree species had higher classification accuracy overall and made up the majority of tree plantations in this landscape. Our results indicate that combining occasionally acquired hyperspectral data with widely available multitemporal satellite imagery enhances mapping and monitoring of reforestation in tropical landscapes

3D kinematics through the X-shaped Milky Way bulge

Context. It has recently been discovered that the Galactic bulge is X-shaped, with the two southern arms of the X both crossing the lines of sight at l = 0 and | b| > 4, hence producing a double red clump in the bulge color magnitude diagram. Dynamical models predict the formation of X-shaped bulges as extreme cases of boxy-peanut bulges. However, since X-shaped bulges were known to be present only in external galaxies, models have never been compared to 3D kinematical data for individual stars. Aims. We study the orbital motion of Galactic bulge stars in the two arms (overdensities) of the X in the southern hemisphere. The goal is to provide observational constraints to bulge formation models that predict the formation of X-shapes through bar dynamical instabilities. Methods. Radial velocities have been obtained for a sample of 454 bulge giants, roughly equally distributed between the bright and the faint red clump, in a field at (l,b) = (0, −6). Proper motions were derived for all red clump stars in the same field by combining images from two epochs, which were obtained 11 years apart, with WFI at the 2.2 m at La Silla. The observed field contains the globular cluster NGC 6558, whose member stars were used to assess the accuracy of the proper motion measurement. At the same time, as a by-product, we provide the first proper motion measurement of NGC 6558. The proper motions for the spectroscopic subsample are analyzed for a subsample of 352 stars, taking into account the radial velocities and metallicities measured from near-infrared calcium triplet lines. Results. The radial velocity distribution of stars in the bright red clump, which traces the closer overdensity of bulge stars, shows an excess of stars moving towards the Sun. Similarly, an excess of stars receding from the Sun is seen in the far overdensity, which is traced by faint red clump stars. This is explained by the presence of stars on elongated orbits, which are most likely streaming along the arms of the X-shaped bulge. Proper motions for these stars are consistent with qualitative predictions of dynamical models of peanut-shaped bulges. Surprisingly, stars on elongated orbits have preferentially metal-poor (subsolar) metallicities, while the metal rich ones, in both overdensities, are preferentially found in more axisymmetric orbits. The observed proper motion of NGC 6558 has been measured as (μlcos   (b),μb) = (0.30   ±   0.14, −0.43 ± 0.13), with a velocity dispersion of (σlcos(b),σb) = (1.8,1.7) mas/yr. This is the first proper motion measurement for this cluster

First description of interdigital hyperplasia associated with contagious ovine digital dermatitis in two sheep

Interdigital hyperplasia (IH) is a fold of fibrous tissue protruding into the interdigital space that rarely occurs in sheep. Interdigital hyperplasia secondary infected with bovine digital dermatitis (BDD) treponemes has been reported in cattle in the course of the increasing spread of classical BDD lesions. In this report, we describe proliferative/ulcerative interdigital lesions associated with contagious ovine digital dermatitis (CODD) treponemes and clinically scored as (IH+CODD), occurring in both hind limbs of a ram and the left hindlimb of a ewe. Both cases exhibited epidermal hyperplasia, parakeratosis and focal-extensive areas of epidermal necrosis with numerous infiltrating neutrophils. Treponema PCR and fluorescence in situ hybridization (FISH) were positive for Treponema phylotype 1 (PT1). In addition, Dichelobacter (D.) nodosus and Porphyromonas (P.) levii were detected in the biopsy by PCR. In three slaughter sheep, without claw lesions, which were kept together with both affected sheep, Treponema spp. were detected neither with PCR nor FISH; the PCRs for D. nodosus and P. levii were also negative. Complete clinical healing occurred in the ewe within 6 weeks after three local applications of a chlortetracycline spray in 2 weeks intervals. This report is the first description of IH+CODD in sheep as demonstrated by a combination of histopathological and molecular analyses

Tensorpac: An open-source Python toolbox for tensor-based phase-amplitude coupling measurement in electrophysiological brain signals

Despite being the focus of a thriving field of research, the biological mechanisms that underlie information integration in the brain are not yet fully understood. A theory that has gained a lot of traction in recent years suggests that multi-scale integration is regulated by a hierarchy of mutually interacting neural oscillations. In particular, there is accumulating evidence that phase-amplitude coupling (PAC), a specific form of cross-frequency interaction, plays a key role in numerous cognitive processes. Current research in the field is not only hampered by the absence of a gold standard for PAC analysis, but also by the computational costs of running exhaustive computations on large and high-dimensional electrophysiological brain signals. In addition, various signal properties and analyses parameters can lead to spurious PAC. Here, we present Tensorpac, an open-source Python toolbox dedicated to PAC analysis of neurophysiological data. The advantages of Tensorpac include (1) higher computational efficiency thanks to software design that combines tensor computations and parallel computing, (2) the implementation of all most widely used PAC methods in one package, (3) the statistical analysis of PAC measures, and (4) extended PAC visualization capabilities. Tensorpac is distributed under a BSD-3-Clause license and can be launched on any operating system (Linux, OSX and Windows). It can be installed directly via pip or downloaded from Github (https://github.com/EtienneCmb/tensorpac). By making Tensorpac available, we aim to enhance the reproducibility and quality of PAC research, and provide open tools that will accelerate future method development in neuroscience

Land cover dynamics following a deforestation ban in northern Costa Rica

Forest protection policies potentially reduce deforestation and re-direct agricultural expansion to already-cleared areas. Using satellite imagery, we assessed whether deforestation for conversion to pasture and cropland decreased in the lowlands of northern Costa Rica following the 1996 ban on forest clearing, despite a tripling of area under pineapple cultivation in the last decade. We observed that following the ban, mature forest loss decreased from 2.2% to 1.2% per year, and the proportion of pineapple and other export-oriented cropland derived from mature forest declined from 16.4% to 1.9%. The post-ban expansion of pineapples and other crops largely replaced pasture, exotic and native tree plantations, and secondary forests. Overall, there was a small net gain in forest cover due to a shifting mosaic of regrowth and clearing in pastures, but cropland expansion decreased reforestation rates. We conclude that forest protection efforts in northern Costa Rica have likely slowed mature forest loss and succeeded in re-directing expansion of cropland to areas outside mature forest. Our results suggest that deforestation bans may protect mature forests better than older forest regrowth and may restrict clearing for large-scale crops more effectively than clearing for pasture

HETDEX pilot survey for emission-line galaxies - I. Survey design, performance, and catalog

We present a catalog of emission-line galaxies selected solely by their emission-line fluxes using a wide-field integral field spectrograph. This work is partially motivated as a pilot survey for the upcoming Hobby-Eberly Telescope Dark Energy Experiment (HETDEX). We describe the observations, reductions, detections, redshift classifications, line fluxes, and counterpart information for 397 emission-line galaxies detected over 169 sq.arcmin with a 3500-5800 Ang. bandpass under 5 Ang. full-width-half-maximum (FWHM) spectral resolution. The survey's best sensitivity for unresolved objects under photometric conditions is between 4-20 E-17 erg/s/sq.cm depending on the wavelength, and Ly-alpha luminosities between 3-6 E42 erg/s are detectable. This survey method complements narrowband and color-selection techniques in the search for high redshift galaxies with its different selection properties and large volume probed. The four survey fields within the COSMOS, GOODS-N, MUNICS, and XMM-LSS areas are rich with existing, complementary data. We find 104 galaxies via their high redshift Ly-alpha emission at 1.9<z<3.8, and the majority of the remainder objects are low redshift [OII]3727 emitters at z<0.56. The classification between low and high redshift objects depends on rest frame equivalent width, as well as other indicators, where available. Based on matches to X-ray catalogs, the active galactic nuclei (AGN) fraction amongst the Ly-alpha emitters (LAEs) is 6%. We also analyze the survey's completeness and contamination properties through simulations. We find five high-z, highly-significant, resolved objects with full-width-half-maximum sizes >44 sq.arcsec which appear to be extended Ly-alpha nebulae. We also find three high-z objects with rest frame Ly-alpha equivalent widths above the level believed to be achievable with normal star formation, EW(rest)>240 Ang.Comment: 45 pages, 36 figures, 5 tables, submitted to ApJ

Aristonectes quiriquinensis, sp. nov., A New Highly Derived Elasmosaurid from the Upper Maastrichtian of Central Chile

This paper describes a new species of elasmosaurid plesiosaur, Aristonectes quiriquinensis, sp. nov., based on a partial skeleton recovered from upper Maastrichtian beds of the Quiriquina Formation of central Chile. The material described here consists of two skeletons, one collected near the village of Cocholgue, and a second juvenile specimen from Quiriquina Island. Prior to these finds, Aristonectes was viewed as a monospecific genus, including only the enigmatic Aristonectes parvidens, the holotype of which consists of an incomplete skull and incomplete postcranium. Other material referred to the genus includes an incomplete juvenile skull and other postcranial material from the upper Maastrichtian of Antarctica, as well as a partial skull from the Quiriquina Formation of central Chile. The relationships of Aristonectes have been controversial, with competing theories assigning the genus to Cryptoclididae, Elasmosauridae, and Aristonectidae; however, there is a developing consensus that Aristonectes is a derived elasmosaurid, and this paper gives strong evidence for this view. Comparison of the specimen here studied with the holotype of A. parvidens demonstrates that A. quiriquinensis is a distinct species. The completeness of the adult skeleton allows the first confident size estimates for adult Aristonectes. It is a large plesiosaurian with a relatively large skull with numerous homodont teeth, a moderately long and laterally compressed neck, and relatively narrow trunk, with slender and elongate forelimbs. The two specimens are restricted to the upper Maastrichtian of central Chile, posing questions concerning the austral circumpolar distribution of different elasmosaurids towards the end of the Cretaceous.Facultad de Ciencias Naturales y Muse