Effects of depth- and CO2-dependent C:N ratios of particulate organic matter (POM) on the marine carbon cycle

According to a recent study, C:N ratios of sinking particulate organic matter (POM) in the ocean appear to be higher than Redfield (7.1 instead of 6.6) and depth dependent (increase +0.2/km). Here we investigate the effects of vertically variable C:N element ratios on marine carbon fluxes and the air-sea exchange of CO2 using a global ocean carbon cycle model (AAMOCC). For a steady-state ocean, the results show that models using the constant classical Redfield ratio underestimate both, total inventory and vertical gradients of dissolved inorganic carbon (DIC). While the amount of additional DIC (+150 Gt C) is negligible compared to the high marine carbon inventory, the C:N depth dependence can reduce the ambient atmospheric pCO2 by 20 ppm, permanently. Moreover, the simulation of a future scenario, estimating a possible effect of CO2-dependent C:N ratios of POM on the marine carbon cycle, has shown that even a moderate rise in the C:N element ratio of sinking POM, which is on the order of magnitude of natural variability, yields a considerably higher oceanic uptake of anthropogenic CO2 on timescales of decades to centuries. The assumption is based on a predicted increase in the production of highly carbon enriched transparent exopolymer particles (TEP) caused by rising atmospheric CO2 concentrations and enhanced nutrient limitation. However, counteracting a predicted decrease of the physical (solubility) CO2 pump as a consequence of global change, the effect in our scenario will alleviate further rising atmospheric CO2 concentrations rather than compensate a reduced physical uptake

The transcription factor Zeb2 regulates development of conventional and plasmacytoid DCs by repressing Id2

Plasmacytoid dendritic cells (DCs [pDCs]) develop from pre-pDCs, whereas two lineages of conventional DCs (cDCs; cDC1s and cDC2s) develop from lineage-committed pre-cDCs. Several transcription factors (TFs) have been implicated in regulating the development of pDCs (E2-2 and Id2) and cDC1s (Irf8, Id2, and Batf3); however, those required for the early commitment of pre-cDCs toward the cDC2 lineage are unknown. Here, we identify the TF zinc finger E box-binding homeobox 2 (Zeb2) to play a crucial role in regulating DC development. Zeb2 was expressed from the pre-pDC and pre-cDC stage onward and highly expressed in mature pDCs and cDC2s. Mice conditionally lacking Zeb2 in CD11c(+) cells had a cell-intrinsic reduction in pDCs and cDC2s, coupled with an increase in cDC1s. Conversely, mice in which CD11c(+) cells overexpressed Zeb2 displayed a reduction in cDC1s. This was accompanied by altered expression of Id2, which was up-regulated in cDC2s and pDCs from conditional knock-out mice. Zeb2 chromatin immunoprecipitation analysis revealed Id2 to be a direct target of Zeb2. Thus, we conclude that Zeb2 regulates commitment to both the cDC2 and pDC lineages through repression of Id2

Human dermal CD14⁺ cells are a transient population of monocyte-derived macrophages.

Dendritic cells (DCs), monocytes, and macrophages are leukocytes with critical roles in immunity and tolerance. The DC network is evolutionarily conserved; the homologs of human tissue CD141(hi)XCR1⁺ CLEC9A⁺ DCs and CD1c⁺ DCs are murine CD103⁺ DCs and CD64⁻ CD11b⁺ DCs. In addition, human tissues also contain CD14⁺ cells, currently designated as DCs, with an as-yet unknown murine counterpart. Here we have demonstrated that human dermal CD14⁺ cells are a tissue-resident population of monocyte-derived macrophages with a short half-life of <6 days. The decline and reconstitution kinetics of human blood CD14⁺ monocytes and dermal CD14⁺ cells in vivo supported their precursor-progeny relationship. The murine homologs of human dermal CD14⁺ cells are CD11b⁺ CD64⁺ monocyte-derived macrophages. Human and mouse monocytes and macrophages were defined by highly conserved gene transcripts, which were distinct from DCs. The demonstration of monocyte-derived macrophages in the steady state in human tissue supports a conserved organization of human and mouse mononuclear phagocyte system

Geographical, seasonal, and depth variation in sinking particle speeds in the North Atlantic

Particle sinking velocity is considered to be a controlling factor for carbon transport to the deep sea and thus carbon sequestration in the oceans. The velocities of the material exported to depth are considered to be high in high-latitude productive systems and low in oligotrophic distributions. We use a recently developed method based on the measurement of the radioactive pair 210Po-210Pb to calculate particle sinking velocities in the temperate and oligotrophic North Atlantic during different bloom stages. Our estimates of average sinking velocities (ASVs) show that slowly sinking particles (&lt;100?m?d?1) contribute significantly to carbon flux at all the locations except in the temperate regions during the bloom. ASVs appear to vary strongly with season, which we propose is caused by changes in the epipelagic community structure. Our results are the first field data to confirm the long-standing theory that particle sinking velocities increase with depth, with increases of up to 90% between 50 and 150?m depth

Particle export from the upper ocean over the continental shelf of the west Antarctic Peninsula: A long-term record, 1992–2007

Author Posting. © The Author(s), 2008. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Deep Sea Research Part II: Topical Studies in Oceanography 55 (2008): 2118-2131, doi:10.1016/j.dsr2.2008.04.028.Includes supplemental materialsWe report on results of a long-term (1993-2007) time series sediment trap moored at 170 m to the west of the Antarctic Peninsula in the mid-continental shelf region (350 m depth; 64º30’ S, 66º00’ W). This is a region characterized by late spring-summer diatom blooms, moderately high seasonal primary productivity (50-150 mmol C m-2 d-1 in December-February) and high phytoplankton and krill biomass in the seasonal sea ice zone. The mass flux ranged from near 0 to over 1 g m-2 d-1 and was near 0 to >30% organic carbon (mean 8%). Sedimentation from the upper ocean as estimated by the trap collections at 170 m exhibited strong seasonality with high fluxes (1-10 mmol C m-2 d-1) in November-March following ice retreat and very low fluxes (<0.001 mmol C m-2 d-1) during the Austral winter and under sea ice cover. An average of 85% of the annual export of 212 mmol C m-2 occurred during the seasonal peak flux episodes. Over the trap record, the annual peak flux episode has tended to occur later in the Austral summer, advancing by about 40 days since 1993. The time-integrated sedimentation during the peak flux episode was <1 – 50% of the SeaWiFS-estimated primary production (mean 4%) at the trap site over the period 1998-2006. The elemental composition of material captured in the traps had an average C:N:P of 212:28:1, greater than the canonical Redfield values. High C:P ratios (400- 600) corresponded with the annual flux peak, indicating preferential loss of P from the sinking particles in the summer, ice-free period. The composition of the exported material more closely approximated the Redfield composition during the low-flux, winter period.This research was supported by NSF Grants OPP 9011927, 9632763 and 0217282 for the Palmer Long Term Ecological Research project

Estimating the Benthic Efflux of Dissolved Iron on the Ross Sea Continental Shelf

Continental margin sediments provide a potentially large but poorly constrained source of dissolved iron (dFe) to the upper ocean. The Ross Sea continental shelf is one region where this benthic supply is thought to play a key role in regulating the magnitude of seasonal primary production. Here we present data collected during austral summer 2012 that reveal contrasting low surface (0.08 +/- 0.07 nM) and elevated near-seafloor (0.74 +/- 0.47 nM) dFe concentrations. Combining these observations with results from a high-resolution physical circulation model, we estimate dFe efflux of 5.8 x 10(7) mol yr(-1) from the deeper portions (\u3e400m) of the Ross Sea continental shelf; more than sufficient to account for the inferred winter reserve dFe inventory at the onset of the growing season. In addition, elevated dFe concentrations observed over shallower bathymetry suggest that such features provide additional inputs of dFe to the euphotic zone throughout the year