Detection and diversity of a putative novel heterogeneous polymorphic proline-glycine repeat (Pgr) protein in the footrot pathogen Dichelobacter nodosus

Dichelobacter nodosus, a Gram-negative anaerobic bacterium, is the essential causative agent of footrot in sheep. Currently, depending on the clinical presentation in the field, footrot is described as benign or virulent; D. nodosus strains have also been classified as benign or virulent, but this designation is not always consistent with clinical disease. The aim of this study was to determine the diversity of the pgr gene, which encodes a putative proline-glycine repeat protein (Pgr). The pgr gene was present in all 100 isolates of D. nodosus that were examined and, based on sequence analysis had two variants, pgrA and pgrB. In pgrA, there were two coding tandem repeat regions, R1 and R2: different strains had variable numbers of repeats within these regions. The R1 and R2 were absent from pgrB. Both variants were present in strains from Australia, Sweden and the UK, however, only pgrB was detected in isolates from Western Australia. The pgrA gene was detected in D. nodosus from tissue samples from two flocks in the UK with virulent footrot and only pgrB from a flock with no virulent or benign footrot for >10 years. Bioinformatic analysis of the putative PgrA protein indicated that it contained a collagen-like cell surface anchor motif. These results suggest that the pgr gene may be a useful molecular marker for epidemiological studies

HST hot-Jupiter transmission spectral survey: Evidence for aerosols and lack of TiO in the atmosphere of WASP-12b

This article has been accepted for publication in Monthly Notices of the Royal Astronomical Society ©: 2013 The Authors Published by Oxford University Press on behalf of the Royal Astronomical Society. All rights reserved.We present Hubble Space Telescope (HST) optical transmission spectra of the transiting hot-Jupiter WASP-12b, taken with the Space Telescope Imaging Spectrograph instrument. The resulting spectra cover the range 2900–10 300 Å which we combined with archival Wide Field Camera 3 spectra and Spitzer photometry to cover the full optical to infrared wavelength regions. With high spatial resolution, we are able to resolve WASP-12A's stellar companion in both our images and spectra, revealing that the companion is in fact a close binary M0V pair, with the three stars forming a triple-star configuration. We derive refined physical parameters of the WASP-12 system, including the orbital ephemeris, finding the exoplanet's density is ∼20 per cent lower than previously estimated. From the transmission spectra, we are able to decisively rule out prominent absorption by TiO in the exoplanet's atmosphere, as there are no signs of the molecule's characteristic broad features nor individual bandheads. Strong pressure-broadened Na and K absorption signatures are also excluded, as are significant metal-hydride features. We compare our combined broad-band spectrum to a wide variety of existing aerosol-free atmospheric models, though none are satisfactory fits. However, we do find that the full transmission spectrum can be described by models which include significant opacity from aerosols: including Rayleigh scattering, Mie scattering, tholin haze and settling dust profiles. The transmission spectrum follows an effective extinction cross-section with a power law of index α, with the slope of the transmission spectrum constraining the quantity αT = −3528 ± 660 K, where T is the atmospheric temperature. Rayleigh scattering (α = −4) is among the best-fitting models, though requires low terminator temperatures near 900 K. Sub-micron size aerosol particles can provide equally good fits to the entire transmission spectrum for a wide range of temperatures, and we explore corundum as a plausible dust aerosol. The presence of atmospheric aerosols also helps to explain the modestly bright albedo implied by Spitzer observations, as well as the near blackbody nature of the emission spectrum. Ti-bearing condensates on the cooler night-side is the most natural explanation for the overall lack of TiO signatures in WASP-12b, indicating the day/night cold trap is an important effect for very hot Jupiters. These findings indicate that aerosols can play a significant atmospheric role for the entire wide range of hot-Jupiter atmospheres, potentially affecting their overall spectrum and energy balance.NASA, through grants under the HST-GO-12473 programme from the STScISTFC (Science & Technology Facilities Council)French Agence Nationale de la Recherche (ANR), under programme ANR-12-BS05-0012 ‘Exo-Atmos

Clostridioides difficile canonical L,D-transpeptidases catalyze a novel type of peptidoglycan cross-links and are not required for beta-lactam resistance

Clostridioides difficile is the leading cause of antibiotic-associated diarrhea worldwide with significant morbidity and mortality. This organism is naturally resistant to several beta-lactam antibiotics that inhibit the polymerization of peptidoglycan, an essential component of the bacteria cell envelope. Previous work has revealed that C. difficile peptidoglycan has an unusual composition. It mostly contains 3-3 cross-links, catalyzed by enzymes called L,D-transpeptidases (Ldts) that are poorly inhibited by beta-lactams. It was therefore hypothesized that peptidoglycan polymerization by these enzymes could underpin antibiotic resistance. Here, we investigated the catalytic activity of the three canonical Ldts encoded by C. difficile (LdtCd1, LdtCd2, and LdtCd3) in vitro and explored their contribution to growth and antibiotic resistance. We show that two of these enzymes catalyze the formation of novel types of peptidoglycan cross-links using meso-diaminopimelic acid both as a donor and an acceptor, also observed in peptidoglycan sacculi. We demonstrate that the simultaneous deletion of these three genes only has a minor impact on both peptidoglycan structure and resistance to beta-lactams. This unexpected result therefore implies that the formation of 3-3 peptidoglycan cross-links in C. difficile is catalyzed by as yet unidentified noncanonical Ldt enzymes

Research trends in combinatorial optimization

Acknowledgments This work has been partially funded by the Spanish Ministry of Science, Innovation, and Universities through the project COGDRIVE (DPI2017-86915-C3-3-R). In this context, we would also like to thank the Karlsruhe Institute of Technology. Open access funding enabled and organized by Projekt DEAL.Peer reviewedPublisher PD

Integrated motor drives: state of the art and future trends

With increased need for high power density, high efficiency and high temperature capabilities in Aerospace and Automotive applications, Integrated Motor Drives (IMD) offers a potential solution. However, close physical integration of the converter and the machine may also lead to an increase in components temperature. This requires careful mechanical, structural and thermal analysis; and design of the IMD system. This paper reviews existing IMD technologies and their thermal effects on the IMD system. The effects of the power electronics (PE) position on the IMD system and its respective thermal management concepts are also investigated. The challenges faced in designing and manufacturing of an IMD along with the mechanical and structural impacts of close physical integration is also discussed and potential solutions are provided. Potential converter topologies for an IMD like the Matrix converter, 2-level Bridge, 3-level NPC and Multiphase full bridge converters are also reviewed. Wide band gap devices like SiC and GaN and their packaging in power modules for IMDs are also discussed. Power modules components and packaging technologies are also presented

Search for leptophobic Z ' bosons decaying into four-lepton final states in proton-proton collisions at root s=8 TeV

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Search for black holes and other new phenomena in high-multiplicity final states in proton-proton collisions at root s=13 TeV

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