Modélisation de la morphologie et de la distribution des nœuds à l’intérieur des tiges d’espèces résineuses

La présence de nœuds à l'intérieur de la tige est une des caractéristiques internes ayant le plus d'impact sur les propriétés mécaniques du bois. Il existe une grande quantité de modèles décrivant l’impact de la croissance et des stratégies sylvicoles sur le développement des branches et quelques modèles décrivant la géométrie des nœuds. Cependant la difficulté à obtenir des données internes précises explique que très peu d’études se sont intéressées à modéliser les relations entre les caractéristiques morphologiques des nœuds et les caractéristiques externes des branches et de l’arbre. La présente recherche a pour objectif principal d’améliorer nos connaissances de la nature des nœuds (fréquence, répartition, forme et taille) de manière à les intégrer dans des modèles de croissances des arbres. Dans un premier volet, nous avons mis au point un modèle statique de la géométrie des nœuds utilisant seulement 5 paramètres à partir d’une combinaison de deux équations non linéaires. La grande flexibilité de ces équations nous a permis de décrire des nœuds de morphologies très variables. Les paramètres obtenus ont ensuite été exprimés en fonction de caractéristiques externes facilement mesurables, afin d’être intégrables dans un modèle de croissance. Dans un second volet, nous avons analysé le ratio d’allocation de matière entre les nœuds et la tige au cours du développement de l’arbre, puis élaboré un modèle linéaire mixte qui se veut dynamique dans le temps. Ce dernier décrit l’évolution de la morphologie d’un nœud en fonction de la croissance secondaire de la tige. Finalement, par une méthode empirique basée sur deux filtres successifs tenant compte du diamètre des branches et de leur espacement, nous avons pu améliorer le positionnement des unités de croissance le long de tiges d’épinette. Cette délimitation nous a permis de modéliser le nombre de branches dans les unités de croissance ainsi que leurs positions autour et au long du tronc. L’intégration de ces modèles de nœuds couplés à une distribution plus réaliste des nœuds dans le tronc permettra de développer un simulateur de la croissance des arbres capable de représenter la morphogénèse des nœuds à l’intérieur de la tige.The presence of knots is one of the internal characteristics with the greatest impact on the mechanical properties of wood. Several models describe the impact of tree growth and of silvicultural strategies on the development of branches but fewer models describe the geometry of knots. However, the difficulties to obtain accurate internal data may explain that very few studies have focused on modelling the relationship between the knot morphology and tree and branch characteristics. The main objective of this study was to improve our knowledge of knottiness (frequency, distribution, shape and size) for integration into existing growth models. In a first stage, we developed a static model of knot geometry using only 5 parameters from a combination of two nonlinear equations. The flexibility of these equations allowed us to describe a wide range of knot types. The parameters obtained were then modelled as functions of measurable tree and branch characteristics, to facilitate the integration into a growth model. In a second stage, we analysed the ratio of knot to stem allocation over the tree development, and then developed a mixed effect model that was dynamic in time. The latter describes the evolution of knot morphology as a function of the stem’s secondary growth. Finally, through an empirical method based on two successive filters and using the branches diameter and the distance between them, we were able to improve the positioning of the growth units along black spruce stems. This allowed us to model the number of branches within growth units and their positions along and around the stem. The integration of these knot models coupled to a more realistic distribution of the knots along the trunk will allow the development of a tree growth simulator capable to represent the knot morphogenesis inside the stem

Density and diameter distributions of saplings in naturally regenerated and planted coniferous stands in Québec after various approaches of commercial thinning

Key Message A model describing species composition, density and diameter distribution of saplings was developed from operational inventory data. It could be used as an input into growth models calibrated exclusively with merchantable trees to correct some recruitment bias. Important differences in distributions were found between plantations and naturally regenerated stands. Longer-term monitoring would be required to observe the effects of thinning treatments on saplings. Context Saplings play important ecological and structural roles in forest stands. They also constitute the pool of candidate trees that are responsible for recruitment of merchantable sized trees. However, sapling information is often absent from regular inventory measurements (e.g. where no saplings are measured) even though they could be used as inputs in predicting recruitment in merchantable trees. Aims The objectives were to develop models describing density and diameter distribution of saplings from operational inventories, e.g. having only merchantable tree inventory, and to evaluate how stand type (naturally regenerated stands and plantations) and various thinning treatments influence these distributions. Methods Using data from both white spruce (Picea glauca [Moench] Voss) plantations and naturally regenerated balsam fir (Abies balsamea (L.) Mill.) stands having been commercially thinned, a zero-inflated poisson regression was used to model the stand density and a gamma regression to predict the two parameters of the Weibull used to characterize the diameter distribution. Results Despite the fact that the operational inventory data is often limited (e.g. species, dbh, height), the accuracy of the models was good and unbiased. It could be integrated into growth models to complete missing sapling distributions and help to correct some recruitment bias. Important differences in species composition, density and diameter distribution were found between plantations and naturally regenerated stands, but only a moderate response in diameter distribution was observed with thinning treatments. Conclusion These models will enable managers to estimate saplings in intermediate aged softwood forests of eastern Quebec using harvesting inventories or National Forest Inventory. Characterization of differences between plantations and naturally regenerated stands will be useful for integrating intensive plantation silviculture with ecosystem-based management. Longer-term follow-up would be needed to better evaluate the effects of thinning treatments. -- Keywords : Stand structure ; Diameter distribution ; Weibull distribution ; White spruce plantation ; Naturally regenerated softwood stand ; Thinning treatment

Spatial distribution of Glossina sp. and Trypanosoma sp. in south-western Ethiopia

Background Accurate information on the distribution of the tsetse fly is of paramount importance to better control animal trypanosomosis. Entomological and parasitological surveys were conducted in the tsetse belt of south-western Ethiopia to describe the prevalence of trypanosomosis (PoT), the abundance of tsetse flies (AT) and to evaluate the association with potential risk factors. Methods The study was conducted between 2009 and 2012. The parasitological survey data were analysed by a random effects logistic regression model, whereas the entomological survey data were analysed by a Poisson regression model. The percentage of animals with trypanosomosis was regressed on the tsetse fly count using a random effects logistic regression model. Results The following six risk factors were evaluated for PoT (i) altitude: significant and inverse correlation with trypanosomosis, (ii) annual variation of PoT: no significant difference between years, (iii) regional state: compared to Benishangul-Gumuz (18.0 %), the three remaining regional states showed significantly lower PoT, (iv) river system: the PoT differed significantly between the river systems, (iv) sex: male animals (11.0 %) were more affected than females (9.0 %), and finally (vi) age at sampling: no difference between the considered classes. Observed trypanosome species were T. congolense (76.0 %), T. vivax (18.1 %), T. b. brucei (3.6 %), and mixed T. congolense/vivax (2.4 %). The first four risk factors listed above were also evaluated for AT, and all have a significant effect on AT. In the multivariable model only altitude was retained with AT decreasing with increasing altitude. Four different Glossina species were identified i.e. G. tachinoides (52.0 %), G. pallidipes (26.0 %), G.morsitans submorsitans (15.0 %) and G. fuscipes fuscipes (7.0 %). Significant differences in catches/trap/day between districts were observed for each species. No association could be found between the tsetse fly counts and trypanosomosis prevalence. Conclusions Trypanosomosis remains a constraint to livestock production in south-western Ethiopia. Four Glossina and three Trypanosoma species were observed. Altitude had a significant impact on AT and PoT. PoT is not associated with AT, which could be explained by the importance of mechanical transmission. This needs to be investigated further as it might jeopardize control strategies that target the tsetse fly population

Does Kin Recognition and Sib-Mating Avoidance Limit the Risk of Genetic Incompatibility in a Parasitic Wasp?

Background: When some combinations of maternal and paternal alleles have a detrimental effect on offspring fitness, females should be able to choose mates on the basis of their genetic compatibility. In numerous Hymenoptera, the sex of an individual depends of the allelic combination at a specific locus (single-locus Complementary Sex Determination), and in most of these species individuals that are homozygous at this sexual locus develop into diploid males with zero fitness. Methods and Findings: In this paper, we tested the hypothesis of genetic incompatibility avoidance by investigating sibmating avoidance in the solitary wasp parasitoid, Venturia canescens. In the context of mate choice we show, for the first time in a non-social hymenopteran species, that females can avoid mating with their brothers through kin recognition. In ‘‘no-choice’ ’ tests, the probability a female will mate with an unrelated male is twice as high as the chance of her mating with her brothers. In contrast, in choice tests in small test arenas, no kin discrimination effect was observed. Further experiments with male extracts demonstrate that chemical cues emanating from related males influence the acceptance rate of unrelated males. Conclusions: Our results are compatible with the genetic incompatibility hypothesis. They suggest that the female wasps recognize sibs on the basis of a chemical signature carried or emitted by males possibly using a ‘‘self-referent phenotyp

Mortality and pulmonary complications in patients undergoing surgery with perioperative SARS-CoV-2 infection: an international cohort study

Background: The impact of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) on postoperative recovery needs to be understood to inform clinical decision making during and after the COVID-19 pandemic. This study reports 30-day mortality and pulmonary complication rates in patients with perioperative SARS-CoV-2 infection. Methods: This international, multicentre, cohort study at 235 hospitals in 24 countries included all patients undergoing surgery who had SARS-CoV-2 infection confirmed within 7 days before or 30 days after surgery. The primary outcome measure was 30-day postoperative mortality and was assessed in all enrolled patients. The main secondary outcome measure was pulmonary complications, defined as pneumonia, acute respiratory distress syndrome, or unexpected postoperative ventilation. Findings: This analysis includes 1128 patients who had surgery between Jan 1 and March 31, 2020, of whom 835 (74·0%) had emergency surgery and 280 (24·8%) had elective surgery. SARS-CoV-2 infection was confirmed preoperatively in 294 (26·1%) patients. 30-day mortality was 23·8% (268 of 1128). Pulmonary complications occurred in 577 (51·2%) of 1128 patients; 30-day mortality in these patients was 38·0% (219 of 577), accounting for 81·7% (219 of 268) of all deaths. In adjusted analyses, 30-day mortality was associated with male sex (odds ratio 1·75 [95% CI 1·28–2·40], p\textless0·0001), age 70 years or older versus younger than 70 years (2·30 [1·65–3·22], p\textless0·0001), American Society of Anesthesiologists grades 3–5 versus grades 1–2 (2·35 [1·57–3·53], p\textless0·0001), malignant versus benign or obstetric diagnosis (1·55 [1·01–2·39], p=0·046), emergency versus elective surgery (1·67 [1·06–2·63], p=0·026), and major versus minor surgery (1·52 [1·01–2·31], p=0·047). Interpretation: Postoperative pulmonary complications occur in half of patients with perioperative SARS-CoV-2 infection and are associated with high mortality. Thresholds for surgery during the COVID-19 pandemic should be higher than during normal practice, particularly in men aged 70 years and older. Consideration should be given for postponing non-urgent procedures and promoting non-operative treatment to delay or avoid the need for surgery. Funding: National Institute for Health Research (NIHR), Association of Coloproctology of Great Britain and Ireland, Bowel and Cancer Research, Bowel Disease Research Foundation, Association of Upper Gastrointestinal Surgeons, British Association of Surgical Oncology, British Gynaecological Cancer Society, European Society of Coloproctology, NIHR Academy, Sarcoma UK, Vascular Society for Great Britain and Ireland, and Yorkshire Cancer Research

American beech in value-added hardwood products: Assessing consumer preferences

The depleted state of the northern hardwood forests of Quebec, Canada has forced the hardwood flooring industry to adapt its production. American beech (Fagus grandifolia), a traditionally less desired species, is now increasingly being included in wood supplies to sawmills in western Quebec, where forest managers hope this resource can be valued before the onset of significant mortality and wood degradation from the beech bark disease. This study aimed: 1) to assess the preferences of consumers towards American beech flooring products compared to well known species traditionally used in this market; and 2) to compare results obtained in face-to-face surveys with web-based surveys of consumer preferences. Results from both survey types revealed that the finishing colour was the most important factor affecting the decision of respondents, followed by species and price. American beech ranked third in species preferences, just above birch. Divulgating species names only affected (positively) the perception of respondents towards oak. It was concluded that American beech could be included in the current wood flooring market, probably among cheaper options such as birch. The similarity of results from face-to-face and online surveys suggests that general trends in consumer preferences could be rapidly and cheaply assessed using the latter optio

Regional variation in wood discoloration in paper birch trees

Wood discoloration was investigated in 721 paper birch trees from 146 sites across the managed forest of Quebec, Canada. Discoloration was present at breast height in 85% of trees, but its impact was limited in terms of tree basal area and volume, with proportions of 6.4% and 3.6%, respectively. These two measures were strongly correlated. Discoloration changed wood appearance but had no effect on microfibril angle and modulus of elasticity. Discolored wood was nevertheless denser, probably due to the accumulation of colored extractives. Predictive models were also developed and applied to 415,711 paper birch trees from 51,689 inventory plots across the province to study regional variation. Higher proportions of discolored basal area were obtained in the southwestern areas of the province where the climate is warmer and drier. In these areas, paper birch trees are larger and, likely, support bigger branches which can cause larger columns of discoloration when broken. Lower proportions were found in eastern regions where snowfall is more abundant. Smaller, more flexible branches in trees growing in these areas could explain this result. This study confirms the feasibility of large-scale mapping of wood discoloration in standing trees based on forest inventory and climate data.The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author

Radial trends in black spruce wood density can show an age-and growth-related decline

International audience& Context Wood density variation affects structural timber performance and is correlated with several potentially con-founding factors, such as cambial age, position in the stem and growth rate. To date, these relationships have not been com-prehensively quantified in black spruce (Picea mariana (Mill.) B.S.P.). & Aims The aim of this study was to describe the variation in annual ring density in black spruce as a function of cambial age, stem height and growth rate. & Methods Radial density profiles from 107 black spruce trees were analysed using a two-stage modelling approach. First, the parameters of a nonlinear function were estimated separately for individual samples. Linear regression was then used to model the parameters obtained in the first stage as functions of internal and external tree descriptors. & Results Annual ring density was high near the pith and declined rapidly in the first 15 annual rings before increasing to more stable values between rings 25 and 60. However, just below 25 % of the samples showed a gradual decline towards the bark, typically after ring 60. & Conclusion Describing and quantifying radial density pat-terns, including the decline close to the bark, will help further our understanding of the links between tree growth and ring density over the life of the tree

Gravitropism plays a key role in the diversity of tree ecological strategies at the advance regeneration stage. A case study in the French Guiana tropical rainforest.

Gravitropism is a major process in vertical growth as it allows the positioning of plant in the gravity field and thus, for trees, it takes part in the light foraging strategies. Without any gravitropism, trees would adopt a weeping habit or fall on the ground due to the increasing with growth supported weight, especially at the advance regeneration stage (sapling stage) in the understorey, where tree are very slender and poorly stiff. Most of the gravitropic studies are made by physiologists in order to understand the process and thus are associated to complex laboratory methods (genetic engineering, anatomical studies, accurate 2D ou 3D measurements of form changes with time). In order to study the ecological relevance and the specific diversity of gravitropic performances in natural forests, we developed a framework that uses different kinds of datas. Synchronical analysis has been done i) at the population level in large sample of trees and ii) at the tree level from destructive measurement of the dissymmetry maturation strains known to be the main motor of the posture control reaction of trees. In both cases, biomechanical models allows to estimate some aspects of the dynamic gravitropic process. Diachronical analysis has been done in natural conditions on permanent plots, or in a more traditional way, by observing in greenhouse experiments the righting movements of plants artificially tilted. In the first case, the problem is the high variability of natural disturbances and the slowness of growth and movements in the dark understorey. The second choice allows a measurement of a capacity (i.e. the ability of the species to react in quite extreme conditions of verticality disturbance but good for growth light and nutrient conditions) that is more easy to analyse, but is maybe not so relevant for estimating the ecological strategy (some species could have developed a high efficience of gravitropic reaction in natural conditions by avoiding the mechanical disturbance or adapting the reaction to slow growth and changing environments in natural conditions). All approaches use the same basic biomechanical modelling, i) to analyse simultaneously the reaction and the disturbance (due to the weight increase) during growth, or ii) to combine different parameters (geometry, growth, weight, maturation strains) involved in shape changes and posture control. They give a classification of the species according to their gravitropic performances. Results on 15 species are discussed, with relation to shade-tolerance or avoidance

Data from: Models of knot and stem development in black spruce trees indicate a shift in allocation priority to branches when growth is limited

The branch autonomy principle, which states that the growth of individual branches can be predicted from their morphology and position in the forest canopy irrespective of the characteristics of the tree, has been used to simplify models of branch growth in trees. However, observed changes in allocation priority within trees towards branches growing in light-favoured conditions, referred to as ‘Milton’s Law of resource availability and allocation,’ have raised questions about the applicability of the branch autonomy principle. We present models linking knot ontogeny to the secondary growth of the main stem in black spruce (Picea mariana (Mill.) B.S.P.), which were used to assess the patterns of assimilate allocation over time, both within and between trees. Data describing the annual radial growth of 445 stem rings and the three-dimensional shape of 5,377 knots were extracted from optical scans and X-ray computed tomography images taken along the stems of 10 trees. Total knot to stem area increment ratios (KSR) were calculated for each year of growth, and statistical models were developed to describe the annual development of knot diameter and curvature as a function of stem radial increment, total tree height, stem diameter, and the position of knots along an annual growth unit. KSR varied as a function of tree age and of the height to diameter ratio of the stem, a variable indicative of the competitive status of the tree. Simulations of the development of an individual knot showed that an increase in the stem radial growth rate was associated with an increase in the initial growth of the knot, but also with a shorter lifespan. Our results provide support for ‘Milton’s Law,’ since they indicate that allocation priority is given to locations where the potential return is the highest. The developed models provided realistic simulations of knot morphology within trees, which could be integrated into a functional-structural model of tree growth and above-ground resource partitioning