Metabolic perturbations in mutants of glucose transporters and their applications in metabolite production in Escherichia coli

Background: Most microorganisms have evolved to maximize growth rate, with rapid consumption of carbon sources from the surroundings. However, fast growing phenotypes usually feature secretion of organic compounds. For example, E. coli mainly produced acetate in fast growing condition such as glucose rich and aerobic condition, which is troublesome for metabolic engineering because acetate causes acidification of surroundings, growth inhibition and decline of production yield. The overflow metabolism can be alleviated by reducing glucose uptake rate. Results: As glucose transporters or their subunits were knocked out in E. coli, the growth and glucose uptake rates decreased and biomass yield was improved. Alteration of intracellular metabolism caused by the mutations was investigated with transcriptome analysis and C-13 metabolic flux analysis (C-13 MFA). Various transcriptional and metabolic perturbations were identified in the sugar transporter mutants. Transcription of genes related to glycolysis, chemotaxis, and flagella synthesis was downregulated, and that of gluconeogenesis, Krebs cycle, alternative transporters, quorum sensing, and stress induced proteins was upregulated in the sugar transporter mutants. The specific production yields of value-added compounds (enhanced green fluorescent protein, gamma-aminobutyrate, lycopene) were improved significantly in the sugar transporter mutants. Conclusions: The elimination of sugar transporter resulted in alteration of global gene expression and redirection of carbon flux distribution, which was purposed to increase energy yield and recycle carbon sources. When the pathways for several valuable compounds were introduced to mutant strains, specific yield of them were highly improved. These results showed that controlling the sugar uptake rate is a good strategy for ameliorating metabolite production.11Ysciescopu

Measurement of K^+ \to \pi^0 \mu^+ \nu \gamma decay using stopped kaons

The K^+ \to \pi^0 \mu^+ \nu \gamma ($K_{\mu 3 \gamma}$) decay has been measured with stopped positive kaons at the KEK 12 GeV proton synchrotron. A $K_{\mu 3 \gamma}$ sample containing 125 events was obtained. The partial branching ratio $Br(K_{\mu 3 \gamma}, E_{\gamma}>30 {\rm MeV}, \theta_{\mu^+ \gamma}>20^{\circ})$ was found to be $[2.4 \pm 0.5(stat) \pm 0.6(syst)]\times 10^{-5}$, which is in good agreement with theoretical predictions.Comment: 12 pages, 3 figures, to be published in Physics Letters

Measurement of direct photon emission in K+→π+π0γK^+ \to \pi^+ \pi^0 \gamma decay using stopped positive kaons

The radiative decay $K^+ \to \pi^+ \pi^0 \gamma$ ($K_{\pi 2 \gamma}$) has been measured with stopped positive kaons. A $K_{\pi 2 \gamma}$ sample containing 4k events was analyzed, and the $K_{\pi 2 \gamma}$ branching ratio of the direct photon emission process was determined to be $[6.1\pm2.5({\rm stat})\pm1.9({\rm syst})]\times 10^{-6}$. No interference pattern with internal bremsstrahlung was observed.Comment: 12 pages, 6 figures, 2 tables, to be published in Phys. Lett.

Apparatus for a Search for T-violating Muon Polarization in Stopped-Kaon Decays

The detector built at KEK to search for T-violating transverse muon polarization in K+ --> pi0 mu+ nu (Kmu3) decay of stopped kaons is described. Sensitivity to the transverse polarization component is obtained from reconstruction of the decay plane by tracking the mu+ through a toroidal spectrometer and detecting the pi0 in a segmented CsI(Tl) photon calorimeter. The muon polarization was obtained from the decay positron asymmetry of muons stopped in a polarimeter. The detector included features which minimized systematic errors while maintaining high acceptance.Comment: 56 pages, 30 figures, submitted to NI

Measurement of Γ(Kμ3)/Γ(Ke3)\Gamma(K_{\mu 3})/\Gamma(K_{e3}) ratio using stopped positive kaons

The ratio of the $K^{+}\to \pi^{0} \mu^{+} \nu$ ($K_{\mu3}^+$) and $K^{+}\to \pi^{0} e^{+} \nu$ ($K_{e3}^+$) decay widths, $\Gamma(K_{\mu 3})/\Gamma(K_{e3})$, has been measured with stopped positive kaons. $K_{\mu3}^+$ and $K_{e3}^+$ samples containing 2.4$\times 10^4$ and 4.0$\times 10^4$ events, respectively, were analyzed. The $\Gamma(K_{\mu3})/\Gamma(K_{e3})$ ratio was obtained to be 0.671$\pm$0.007(stat.)$\pm$0.008(syst.) calculating the detector acceptance by a Monte Carlo simulation with the assumption of $\mu$-$e$ universality in $K_{l3}^+$ decay. The coefficient of the $q^2$ dependent term of the $f_0$ form factor was also determined to be $\lambda_0$=0.022$\pm$0.005(stat.)$\pm$0.004(syst.).Comment: 12 pages, 6 figure

Search for displaced vertices arising from decays of new heavy particles in 7 TeV pp collisions at ATLAS

We present the results of a search for new, heavy particles that decay at a significant distance from their production point into a final state containing charged hadrons in association with a high-momentum muon. The search is conducted in a pp-collision data sample with a center-of-mass energy of 7 TeV and an integrated luminosity of 33 pb^-1 collected in 2010 by the ATLAS detector operating at the Large Hadron Collider. Production of such particles is expected in various scenarios of physics beyond the standard model. We observe no signal and place limits on the production cross-section of supersymmetric particles in an R-parity-violating scenario as a function of the neutralino lifetime. Limits are presented for different squark and neutralino masses, enabling extension of the limits to a variety of other models.Comment: 8 pages plus author list (20 pages total), 8 figures, 1 table, final version to appear in Physics Letters

Measurement of the polarisation of W bosons produced with large transverse momentum in pp collisions at sqrt(s) = 7 TeV with the ATLAS experiment

This paper describes an analysis of the angular distribution of W->enu and W->munu decays, using data from pp collisions at sqrt(s) = 7 TeV recorded with the ATLAS detector at the LHC in 2010, corresponding to an integrated luminosity of about 35 pb^-1. Using the decay lepton transverse momentum and the missing transverse energy, the W decay angular distribution projected onto the transverse plane is obtained and analysed in terms of helicity fractions f0, fL and fR over two ranges of W transverse momentum (ptw): 35 < ptw < 50 GeV and ptw > 50 GeV. Good agreement is found with theoretical predictions. For ptw > 50 GeV, the values of f0 and fL-fR, averaged over charge and lepton flavour, are measured to be : f0 = 0.127 +/- 0.030 +/- 0.108 and fL-fR = 0.252 +/- 0.017 +/- 0.030, where the first uncertainties are statistical, and the second include all systematic effects.Comment: 19 pages plus author list (34 pages total), 9 figures, 11 tables, revised author list, matches European Journal of Physics C versio

Observation of a new chi_b state in radiative transitions to Upsilon(1S) and Upsilon(2S) at ATLAS

The chi_b(nP) quarkonium states are produced in proton-proton collisions at the Large Hadron Collider (LHC) at sqrt(s) = 7 TeV and recorded by the ATLAS detector. Using a data sample corresponding to an integrated luminosity of 4.4 fb^-1, these states are reconstructed through their radiative decays to Upsilon(1S,2S) with Upsilon->mu+mu-. In addition to the mass peaks corresponding to the decay modes chi_b(1P,2P)->Upsilon(1S)gamma, a new structure centered at a mass of 10.530+/-0.005 (stat.)+/-0.009 (syst.) GeV is also observed, in both the Upsilon(1S)gamma and Upsilon(2S)gamma decay modes. This is interpreted as the chi_b(3P) system.Comment: 5 pages plus author list (18 pages total), 2 figures, 1 table, corrected author list, matches final version in Physical Review Letter