2,004 research outputs found
Pairwise MRF Calibration by Perturbation of the Bethe Reference Point
We investigate different ways of generating approximate solutions to the
pairwise Markov random field (MRF) selection problem. We focus mainly on the
inverse Ising problem, but discuss also the somewhat related inverse Gaussian
problem because both types of MRF are suitable for inference tasks with the
belief propagation algorithm (BP) under certain conditions. Our approach
consists in to take a Bethe mean-field solution obtained with a maximum
spanning tree (MST) of pairwise mutual information, referred to as the
\emph{Bethe reference point}, for further perturbation procedures. We consider
three different ways following this idea: in the first one, we select and
calibrate iteratively the optimal links to be added starting from the Bethe
reference point; the second one is based on the observation that the natural
gradient can be computed analytically at the Bethe point; in the third one,
assuming no local field and using low temperature expansion we develop a dual
loop joint model based on a well chosen fundamental cycle basis. We indeed
identify a subclass of planar models, which we refer to as \emph{Bethe-dual
graph models}, having possibly many loops, but characterized by a singly
connected dual factor graph, for which the partition function and the linear
response can be computed exactly in respectively O(N) and operations,
thanks to a dual weight propagation (DWP) message passing procedure that we set
up. When restricted to this subclass of models, the inverse Ising problem being
convex, becomes tractable at any temperature. Experimental tests on various
datasets with refined or regularization procedures indicate that
these approaches may be competitive and useful alternatives to existing ones.Comment: 54 pages, 8 figure. section 5 and refs added in V
Spatiotemporal Sparse Bayesian Learning with Applications to Compressed Sensing of Multichannel Physiological Signals
Energy consumption is an important issue in continuous wireless
telemonitoring of physiological signals. Compressed sensing (CS) is a promising
framework to address it, due to its energy-efficient data compression
procedure. However, most CS algorithms have difficulty in data recovery due to
non-sparsity characteristic of many physiological signals. Block sparse
Bayesian learning (BSBL) is an effective approach to recover such signals with
satisfactory recovery quality. However, it is time-consuming in recovering
multichannel signals, since its computational load almost linearly increases
with the number of channels.
This work proposes a spatiotemporal sparse Bayesian learning algorithm to
recover multichannel signals simultaneously. It not only exploits temporal
correlation within each channel signal, but also exploits inter-channel
correlation among different channel signals. Furthermore, its computational
load is not significantly affected by the number of channels. The proposed
algorithm was applied to brain computer interface (BCI) and EEG-based driver's
drowsiness estimation. Results showed that the algorithm had both better
recovery performance and much higher speed than BSBL. Particularly, the
proposed algorithm ensured that the BCI classification and the drowsiness
estimation had little degradation even when data were compressed by 80%, making
it very suitable for continuous wireless telemonitoring of multichannel
signals.Comment: Codes are available at:
https://sites.google.com/site/researchbyzhang/stsb
Gaussian Belief Propagation Based Multiuser Detection
In this work, we present a novel construction for solving the linear
multiuser detection problem using the Gaussian Belief Propagation algorithm.
Our algorithm yields an efficient, iterative and distributed implementation of
the MMSE detector. We compare our algorithm's performance to a recent result
and show an improved memory consumption, reduced computation steps and a
reduction in the number of sent messages. We prove that recent work by
Montanari et al. is an instance of our general algorithm, providing new
convergence results for both algorithms.Comment: 6 pages, 1 figures, appeared in the 2008 IEEE International Symposium
on Information Theory, Toronto, July 200
Tree-guided group lasso for multi-response regression with structured sparsity, with an application to eQTL mapping
We consider the problem of estimating a sparse multi-response regression
function, with an application to expression quantitative trait locus (eQTL)
mapping, where the goal is to discover genetic variations that influence
gene-expression levels. In particular, we investigate a shrinkage technique
capable of capturing a given hierarchical structure over the responses, such as
a hierarchical clustering tree with leaf nodes for responses and internal nodes
for clusters of related responses at multiple granularity, and we seek to
leverage this structure to recover covariates relevant to each
hierarchically-defined cluster of responses. We propose a tree-guided group
lasso, or tree lasso, for estimating such structured sparsity under
multi-response regression by employing a novel penalty function constructed
from the tree. We describe a systematic weighting scheme for the overlapping
groups in the tree-penalty such that each regression coefficient is penalized
in a balanced manner despite the inhomogeneous multiplicity of group
memberships of the regression coefficients due to overlaps among groups. For
efficient optimization, we employ a smoothing proximal gradient method that was
originally developed for a general class of structured-sparsity-inducing
penalties. Using simulated and yeast data sets, we demonstrate that our method
shows a superior performance in terms of both prediction errors and recovery of
true sparsity patterns, compared to other methods for learning a
multivariate-response regression.Comment: Published in at http://dx.doi.org/10.1214/12-AOAS549 the Annals of
Applied Statistics (http://www.imstat.org/aoas/) by the Institute of
Mathematical Statistics (http://www.imstat.org
Metaheuristic design of feedforward neural networks: a review of two decades of research
Over the past two decades, the feedforward neural network (FNN) optimization has been a key interest among the researchers and practitioners of multiple disciplines. The FNN optimization is often viewed from the various perspectives: the optimization of weights, network architecture, activation nodes, learning parameters, learning environment, etc. Researchers adopted such different viewpoints mainly to improve the FNN's generalization ability. The gradient-descent algorithm such as backpropagation has been widely applied to optimize the FNNs. Its success is evident from the FNN's application to numerous real-world problems. However, due to the limitations of the gradient-based optimization methods, the metaheuristic algorithms including the evolutionary algorithms, swarm intelligence, etc., are still being widely explored by the researchers aiming to obtain generalized FNN for a given problem. This article attempts to summarize a broad spectrum of FNN optimization methodologies including conventional and metaheuristic approaches. This article also tries to connect various research directions emerged out of the FNN optimization practices, such as evolving neural network (NN), cooperative coevolution NN, complex-valued NN, deep learning, extreme learning machine, quantum NN, etc. Additionally, it provides interesting research challenges for future research to cope-up with the present information processing era
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