307 research outputs found

    Sedimentological characterization of Antarctic moraines using UAVs and Structure-from-Motion photogrammetry

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    In glacial environments particle-size analysis of moraines provides insights into clast origin, transport history, depositional mechanism and processes of reworking. Traditional methods for grain-size classification are labour-intensive, physically intrusive and are limited to patch-scale (1m2) observation. We develop emerging, high-resolution ground- and unmanned aerial vehicle-based ‘Structure-from-Motion’ (UAV-SfM) photogrammetry to recover grain-size information across an moraine surface in the Heritage Range, Antarctica. SfM data products were benchmarked against equivalent datasets acquired using terrestrial laser scanning, and were found to be accurate to within 1.7 and 50mm for patch- and site-scale modelling, respectively. Grain-size distributions were obtained through digital grain classification, or ‘photo-sieving’, of patch-scale SfM orthoimagery. Photo-sieved distributions were accurate to <2mm compared to control distributions derived from dry sieving. A relationship between patch-scale median grain size and the standard deviation of local surface elevations was applied to a site-scale UAV-SfM model to facilitate upscaling and the production of a spatially continuous map of the median grain size across a 0.3 km2 area of moraine. This highly automated workflow for site scale sedimentological characterization eliminates much of the subjectivity associated with traditional methods and forms a sound basis for subsequent glaciological process interpretation and analysis

    AD51B in Familial Breast Cancer

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    Common variation on 14q24.1, close to RAD51B, has been associated with breast cancer: rs999737 and rs2588809 with the risk of female breast cancer and rs1314913 with the risk of male breast cancer. The aim of this study was to investigate the role of RAD51B variants in breast cancer predisposition, particularly in the context of familial breast cancer in Finland. We sequenced the coding region of RAD51B in 168 Finnish breast cancer patients from the Helsinki region for identification of possible recurrent founder mutations. In addition, we studied the known rs999737, rs2588809, and rs1314913 SNPs and RAD51B haplotypes in 44,791 breast cancer cases and 43,583 controls from 40 studies participating in the Breast Cancer Association Consortium (BCAC) that were genotyped on a custom chip (iCOGS). We identified one putatively pathogenic missense mutation c.541C&gt;T among the Finnish cancer patients and subsequently genotyped the mutation in additional breast cancer cases (n = 5259) and population controls (n = 3586) from Finland and Belarus. No significant association with breast cancer risk was seen in the meta-analysis of the Finnish datasets or in the large BCAC dataset. The association with previously identified risk variants rs999737, rs2588809, and rs1314913 was replicated among all breast cancer cases and also among familial cases in the BCAC dataset. The most significant association was observed for the haplotype carrying the risk-alleles of all the three SNPs both among all cases (odds ratio (OR): 1.15, 95% confidence interval (CI): 1.11–1.19, P = 8.88 x 10−16) and among familial cases (OR: 1.24, 95% CI: 1.16–1.32, P = 6.19 x 10−11), compared to the haplotype with the respective protective alleles. Our results suggest that loss-of-function mutations in RAD51B are rare, but common variation at the RAD51B region is significantly associated with familial breast cancer risk

    Blue-ice moraines formation in the Heritage Range, West Antarctica: implications for ice sheet history and climate reconstruction

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    Blue ice is found in areas of Antarctica where katabatic winds, focussed by steep surface slopes or by topography around nunataks, cause enhanced surface ablation. This process draws up deeper, older ice to the ice sheet surface, often bringing with it englacial sediment. Prevailing theories for dynamically stable moraine surfaces in East Antarctica suggest that: (i) it is this material, once concentrated, that forms blue-ice moraines (BIM), (ii) that the moraine formation can be dated using cosmogenic isotope approaches, and that, (iii) since we expect an increase in exposure age moving away from the ice margin towards bedrock, dating across the moraine can be used to constrain ice-sheet history. To test this lateral accretion model for BIM formation we visited Patriot, Marble and Independence Hills in the southern Heritage Range, West Antarctica. Detailed field surveys of surface form, sediment and moraine dynamics were combined with geophysical surveys of the englacial structure of the moraines and cosmogenic nuclide analysis of surface clasts. Results suggest sediment is supplied mainly by basal entrainment, supplemented by debris-covered valley glaciers transferring material onto the ice sheet surface, direct deposition from rock-fall and slope processes from nunataks. We find that once sediment coalesces in BIM, significant reworking occurs through differential ablation, slope and periglacial processes. We bring these processes together in a conceptual model, concluding that many BIM in West Antarctica are dynamic and, whilst they persist through glacial cycles, they do not always neatly record ice sheet retreat patterns since linear distance from the ice margin does not always relate to increased clast exposure age. Understanding the dynamic processes involved in moraine formation is critical to the effective interpretation of the typically large scatter of cosmogenic nuclide exposure ages, opening a deep window into the million-year history of the West Antarctic Ice Sheet

    Genome-wide meta-analysis identifies five new susceptibility loci for cutaneous malignant melanoma.

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    Thirteen common susceptibility loci have been reproducibly associated with cutaneous malignant melanoma (CMM). We report the results of an international 2-stage meta-analysis of CMM genome-wide association studies (GWAS). This meta-analysis combines 11 GWAS (5 previously unpublished) and a further three stage 2 data sets, totaling 15,990 CMM cases and 26,409 controls. Five loci not previously associated with CMM risk reached genome-wide significance (P < 5 × 10(-8)), as did 2 previously reported but unreplicated loci and all 13 established loci. Newly associated SNPs fall within putative melanocyte regulatory elements, and bioinformatic and expression quantitative trait locus (eQTL) data highlight candidate genes in the associated regions, including one involved in telomere biology.[Please see the Supplementary Note for acknowledgments.]This is the author accepted manuscript. The final version is available from NPG via http://dx.doi.org/10.1038/ng.337

    Caracol, Belize, and Changing Perceptions of Ancient Maya Society

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    Drift-dependent changes in iceberg size-frequency distributions

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    Although the size-frequency distributions of icebergs can provide insight into how they disintegrate, our understanding of this process is incomplete. Fundamentally, there is a discrepancy between iceberg power-law size-frequency distributions observed at glacial calving fronts and lognormal size-frequency distributions observed globally within open waters that remains unexplained. Here we use passive seismic monitoring to examine mechanisms of iceberg disintegration as a function of drift. Our results indicate that the shift in the size-frequency distribution of iceberg sizes observed is a product of fracture-driven iceberg disintegration and dimensional reductions through melting. We suggest that changes in the characteristic size-frequency scaling of icebergs can be explained by the emergence of a dominant set of driving processes of iceberg degradation towards the open ocean. Consequently, the size-frequency distribution required to model iceberg distributions accurately must vary according to distance from the calving front
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