Retinal blood vessels extraction using probabilistic modelling

© 2014 Kaba et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.This article has been made available through the Brunel Open Access Publishing Fund.The analysis of retinal blood vessels plays an important role in detecting and treating retinal diseases. In this review, we present an automated method to segment blood vessels of fundus retinal image. The proposed method could be used to support a non-intrusive diagnosis in modern ophthalmology for early detection of retinal diseases, treatment evaluation or clinical study. This study combines the bias correction and an adaptive histogram equalisation to enhance the appearance of the blood vessels. Then the blood vessels are extracted using probabilistic modelling that is optimised by the expectation maximisation algorithm. The method is evaluated on fundus retinal images of STARE and DRIVE datasets. The experimental results are compared with some recently published methods of retinal blood vessels segmentation. The experimental results show that our method achieved the best overall performance and it is comparable to the performance of human experts.The Department of Information Systems, Computing and Mathematics, Brunel University

A microfluidic study to investigate the effect of magnetic iron core-carbon shell nanoparticles on displacement mechanisms of crude oil for chemical enhanced oil recovery

The main objective of this work is to evaluate the effect of the simultaneous use of a surfactant mixture and magnetic iron core-carbon shell nanoparticles on oil recovery via a microfluidic study based on the rock-on-a-chip technology. The surfactant solution used for all experiments was prepared based on a field formulation and consisted of a mixture of a hydrophilic and a lipophilic surfactant. Magnetic iron core-carbon shell nanoparticles with a mean particle size of 60 nm and a surface area of 123 m2 g−1 were employed. The displacement experiments consisted of waterflooding, surfactant flooding and nanoparticle-surfactant flooding and were performed using PDMS (polydimethylsiloxane)-glass microdevices type random network. The characteristics and design of the microfluidic device allowed to emulate a mixed wettability of a porous medium. Then, the oil was displaced by injecting the solution at a constant injection rate, until steady-state conditions were obtained. Furthermore, the effect of three injection rates corresponding to 0.1 ft day−1, 1 ft day−1, and 10 ft day−1 was investigated. The increase in the injection rate favored the oil recovery percentage. In addition, for all injection rates, the oil recovery decreased in the following order: nanoparticle-surfactant flooding > surfactant flooding > waterflooding. The nanoparticle-surfactant system at the injection rate of 1.9 μL min−1 presented the highest oil recovery (i.e., 84%). Likewise, nanoparticle-surfactant flooding showed a more stable displacement front and consequently, the highest capillary number among the injection fluids. Oil recovery by waterflooding was the lowest among the evaluated systems due to the viscous fingering phenomena under different injection rates. In addition, it can be observed that for all injection rates, the presence of the surfactant mixture and nanoparticles reduce the viscous fingering effect. The results can be used to visually and quantitatively analyze the role of the simultaneous use of nanoparticles with surfactants in enhanced oil recovery processes.Fil: Betancur, Stefanía. Universidad Nacional de Colombia. Sede Medellín; Colombia. Universidad de Granada; EspañaFil: Olmos Carreno, Carol Maritza. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad Nacional de Colombia. Sede Medellín; Colombia. Universidad Tecnológica Nacional. Facultad Regional Haedo; ArgentinaFil: Perez, Maximiliano Sebastian. Universidad Tecnológica Nacional. Facultad Regional Haedo; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Buenos Aires; ArgentinaFil: Lerner, Betiana. Universidad Tecnológica Nacional. Facultad Regional Haedo; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Buenos Aires; ArgentinaFil: Franco, Camilo A.. Universidad Nacional de Colombia. Sede Medellin; ColombiaFil: Riazi, Masoud. Shiraz University; IránFil: Gallego, Jaime. Universidad Nacional de Colombia. Sede Medellin; Colombia. Universidad de Antioquia; ColombiaFil: Carrasco Marín, Francisco. Universidad de Granada; EspañaFil: Cortés, Farid B.. Universidad Nacional de Colombia. Sede Medellin; Colombi

An Atlas of the circumnuclear regions of 75 Seyfert galaxies in the near-UV with HST Advanced Camera for Surveys

We present an atlas of the central regions of 75 Seyfert galaxies imaged in the near-UV with the Advanced Camera for Surveys of the Hubble Space Telescope at an average resolution of ~10pc. These data complement archival high resolution data from the Space Telescope at optical and near-IR wavelengths, creating an extremely valuable dataset for astronomers with a broad range of scientific interests. Our goal is to investigate the nature of the near-UV light in these objects, its relation to the circumnuclear starburst phenomenon, and the connection of this to the evolution and growth of the galaxy bulge and central black hole. In this paper, we describe the near-UV morphology of the objects and characterize the near-UV emission. We estimate the size and the luminosity of the emitting regions and extract the luminosity profile. We also determine the presence of unresolved compact nuclei. In addition, the circumnuclear stellar cluster population is identified, and the contribution of the stellar clusters to the total light, at this wavelength, is estimated. The size of the sample allows us to draw robust statistical conclusions. We find that {Seyfert 1} galaxies are completely dominated by its bright and compact nucleus, that remains point-like at this resolution, while we find almost no unresolved nucleus in Seyfert 2. The Seyfert types 1 and 2 are quite segregated in an asymmetry vs compactness plot. Stellar clusters are found somewhat more frequently in Sy2 (in ~70% of the galaxies) than in Sy1 (~57%), and contribute more to the total light in Sy2, but this two differences seem to be mostly due to the large contribution of the compact nucleus in Sy1, as the luminosity distribution of the clusters is similar in both Sy types.Comment: Accepted for publication in AJ, 58 pages, 20 figures. High-resolution figures for all the objects are available at http://www.iaa.es/~manuel/publications/paper01.htm

GeoTraductores: A Collaborative Initiative Democratizing Science Communication in Latin America

GeoTraductores is an collaborative initiative between Eos, Planeteando, andGeoLatinas that aims to provide Spanish-speaking communities access to current scientific findings. This goal is accomplished by translating science articles originally published in English on AGU's Eos.org, within their Science News magazine, into Spanish. This cross-organizational initiative has translated, edited, and published over 150 articles, breaking the language barrier for Spanish-speaking communities. Our experience since 2020 has allowed us to tailor an efficient co-production model, which starts with (a) the selection of articles of interest to translate, followed by (b) the translation, reviewing, and editing process by volunteers, and (c) the publication and social media dissemination of the translated article. The tangible impact of GeoTraductores is evident in the substantial surge of visitor traffic to the Eos website between 2020 and 2023, particularly from Latin American countries. Notably, increases exceeding 85% were observed in Colombia, Mexico, and Panama, with 20% or greater growth in Chile, Brazil, Costa Rica, Peru, and Ecuador, confirming the initiative's success in meeting a genuine need. This impact extends globally, with Spain experiencing a 40% increase in visitors. Our co-production model is possible thanks to the contribution of around 40 GeoTraductores, mainly women (85%), who are native Spanish speakers or bilingual (Spanish and English speaking). These early-career scientists, through their volunteer work, enhance their bilingual communication skills while breaking down language barriers in science communication. The Eos-Planeteando-GeoLatinas co-production model fosters science democratization for Latin America while promoting diversity, equity, and inclusion in Earth Sciences, one translation at a time

Improved constraints on the expansion rate of the Universe up to z~1.1 from the spectroscopic evolution of cosmic chronometers

We present new improved constraints on the Hubble parameter H(z) in the redshift range 0.15 < z < 1.1, obtained from the differential spectroscopic evolution of early-type galaxies as a function of redshift. We extract a large sample of early-type galaxies (\sim11000) from several spectroscopic surveys, spanning almost 8 billion years of cosmic lookback time (0.15 < z < 1.42). We select the most massive, red elliptical galaxies, passively evolving and without signature of ongoing star formation. Those galaxies can be used as standard cosmic chronometers, as firstly proposed by Jimenez & Loeb (2002), whose differential age evolution as a function of cosmic time directly probes H(z). We analyze the 4000 {\AA} break (D4000) as a function of redshift, use stellar population synthesis models to theoretically calibrate the dependence of the differential age evolution on the differential D4000, and estimate the Hubble parameter taking into account both statistical and systematical errors. We provide 8 new measurements of H(z) (see Tab. 4), and determine its change in H(z) to a precision of 5-12% mapping homogeneously the redshift range up to z \sim 1.1; for the first time, we place a constraint on H(z) at z \neq 0 with a precision comparable with the one achieved for the Hubble constant (about 5-6% at z \sim 0.2), and covered a redshift range (0.5 < z < 0.8) which is crucial to distinguish many different quintessence cosmologies. These measurements have been tested to best match a \Lambda CDM model, clearly providing a statistically robust indication that the Universe is undergoing an accelerated expansion. This method shows the potentiality to open a new avenue in constrain a variety of alternative cosmologies, especially when future surveys (e.g. Euclid) will open the possibility to extend it up to z \sim 2.Comment: 34 pages, 15 figures, 6 tables, published in JCAP. It is a companion to Moresco et al. (2012b, http://arxiv.org/abs/1201.6658) and Jimenez et al. (2012, http://arxiv.org/abs/1201.3608). The H(z) data can be downloaded at http://www.physics-astronomy.unibo.it/en/research/areas/astrophysics/cosmology-with-cosmic-chronometer

Safety, activity, and molecular heterogeneity following neoadjuvant non-pegylated liposomal doxorubicin, paclitaxel, trastuzumab, and pertuzumab in HER2-positive breast cancer (Opti-HER HEART): an open-label, single-group, multicenter, phase 2 trial

Antecedents: L'assaig Opti-HER HEART tenia com a objectiu optimitzar l'activitat i minimitzar el risc cardíac combinant trastuzumab, pertuzumab i paclitaxel amb doxorubicina liposomal no pegilada en el tractament del càncer de mama precoç HER2-positiu. Mètodes: Els pacients amb càncer de mama HER2 positiu en fase II-IIIB van rebre trastuzumab neoadjuvant, pertuzumab, paclitaxel i una doxorubicina liposomal no pegilada cada tres setmanes durant sis cicles. El principal criteri final va ser la seguretat cardíaca durant la teràpia neoadjuvant. Es van avaluar els esdeveniments cardíacs tipus A (insuficiència cardíaca congestiva simptomàtica) i B (reducció asimptomàtica de la fracció d'ejecció del ventricle esquerre). Els criteris finals secundaris van incloure l'avaluació de la taxa de resposta patològica completa (pCR) i la taxa de resposta global, entre d'altres. Com a anàlisi exploratòria ad-hoc , es va mesurar l'expressió de 55 gens relacionats amb el càncer de mama, inclosos els gens PAM50 , en 58 mostres de tumors basals i 60 mostres quirúrgiques. Resultats: Es van reclutar vuitanta-tres pacients. La incidència d'esdeveniments cardíacs durant el tractament neoadjuvant va ser del 2,4%. No es va observar cap esdeveniment cardíac de tipus A. La taxa global de pCR va ser del 56,6% (interval de confiança (IC) del 95%: 45,3-67,5%). El subtipus enriquit amb HER2, que representava el 52,0% de totes les mostres basals, es va associar amb una taxa de pCR més alta en comparació amb els tumors no enriquits amb HER2 (83,3% vs. 46,3%; odds ratio 5,76; 95% CI 1,71-19,42). L'associació de subtipus amb pCR va ser independent de les variables clínicopatològiques conegudes, inclòs l'estat del receptor hormonal. En comparació amb les mostres basals, els exemplars quirúrgics van mostrar una significativa regulació descendent dels nivells relacionats amb la proliferació ( MKI67 i CCNB1 ) i ERBB2 , i una regulació ascendent significativa dels relacionats amb la llum (ESR1 i PGR ) i gens immunes ( CD8A ). Conclusions: La combinació de doble bloqueig HER2 amb trastuzumab i pertuzumab amb paclitaxel i doxorubicina liposomal no pegilada s'associa amb una baixa taxa d'esdeveniments cardíacs. El subtipus enriquit amb HER2 s'associa a una alta taxa de pCR

Manejo Integral de Agua y Suelo en Centroamérica. Bases científicas para el desarrollo rural comunitario.

Este libro recoge los frutos de la colaboración y trabajo conjunto de un grupo de Universidades Iberoamericanas entre 2007 y 2012 el marco de las actividades del Programa de Cooperación Comunidad, Agua y Bosque en Centroamérica (CAB Centroamérica, http://www2.caminos.upm.es/Departamentos/imt/Topografia/Cab/cab.html ). Las actividades se han realizado con el apoyo del Programa de Cooperación Universitaria PCI-AECID IBEROAMÉRICA, de la Dirección de Cooperación para el Desarrollo de la Universidad Politécnica de Madrid y de los fondos propios de las Universidades latinoamericanas, con especial mención a la Universidad de Costa Rica, coordinadora de los trabajos en Centroamérica. El inicio de esta colaboración se produjo en 2007 a partir de la identificación de un objetivo común: profundizar la investigación sobre la dinámica agua-suelo-planta para mejorar la producción y la calidad del agua de los sistemas de abastecimiento comunitarios en Centroamérica

Charge separation relative to the reaction plane in Pb-Pb collisions at sNN=2.76\sqrt{s_{\rm NN}}= 2.76 TeV

Measurements of charge dependent azimuthal correlations with the ALICE detector at the LHC are reported for Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 2.76$ TeV. Two- and three-particle charge-dependent azimuthal correlations in the pseudo-rapidity range $|\eta| < 0.8$ are presented as a function of the collision centrality, particle separation in pseudo-rapidity, and transverse momentum. A clear signal compatible with a charge-dependent separation relative to the reaction plane is observed, which shows little or no collision energy dependence when compared to measurements at RHIC energies. This provides a new insight for understanding the nature of the charge dependent azimuthal correlations observed at RHIC and LHC energies.Comment: 12 pages, 3 captioned figures, authors from page 2 to 6, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/286

A note on comonotonicity and positivity of the control components of decoupled quadratic FBSDE

In this small note we are concerned with the solution of Forward-Backward Stochastic Differential Equations (FBSDE) with drivers that grow quadratically in the control component (quadratic growth FBSDE or qgFBSDE). The main theorem is a comparison result that allows comparing componentwise the signs of the control processes of two different qgFBSDE. As a byproduct one obtains conditions that allow establishing the positivity of the control process.Comment: accepted for publicatio

Transverse sphericity of primary charged particles in minimum bias proton-proton collisions at s=0.9\sqrt{s}=0.9, 2.76 and 7 TeV

Measurements of the sphericity of primary charged particles in minimum bias proton--proton collisions at $\sqrt{s}=0.9$, 2.76 and 7 TeV with the ALICE detector at the LHC are presented. The observable is linearized to be collinear safe and is measured in the plane perpendicular to the beam direction using primary charged tracks with $p_{\rm T}\geq0.5$ GeV/c in $|\eta|\leq0.8$. The mean sphericity as a function of the charged particle multiplicity at mid-rapidity ($N_{\rm ch}$) is reported for events with different $p_{\rm T}$ scales ("soft" and "hard") defined by the transverse momentum of the leading particle. In addition, the mean charged particle transverse momentum versus multiplicity is presented for the different event classes, and the sphericity distributions in bins of multiplicity are presented. The data are compared with calculations of standard Monte Carlo event generators. The transverse sphericity is found to grow with multiplicity at all collision energies, with a steeper rise at low $N_{\rm ch}$, whereas the event generators show the opposite tendency. The combined study of the sphericity and the mean $p_{\rm T}$ with multiplicity indicates that most of the tested event generators produce events with higher multiplicity by generating more back-to-back jets resulting in decreased sphericity (and isotropy). The PYTHIA6 generator with tune PERUGIA-2011 exhibits a noticeable improvement in describing the data, compared to the other tested generators.Comment: 21 pages, 9 captioned figures, 3 tables, authors from page 16, published version, figures from http://aliceinfo.cern.ch/ArtSubmission/node/308