A communal catalogue reveals Earth's multiscale microbial diversity

Our growing awareness of the microbial world's importance and diversity contrasts starkly with our limited understanding of its fundamental structure. Despite recent advances in DNA sequencing, a lack of standardized protocols and common analytical frameworks impedes comparisons among studies, hindering the development of global inferences about microbial life on Earth. Here we present a meta-analysis of microbial community samples collected by hundreds of researchers for the Earth Microbiome Project. Coordinated protocols and new analytical methods, particularly the use of exact sequences instead of clustered operational taxonomic units, enable bacterial and archaeal ribosomal RNA gene sequences to be followed across multiple studies and allow us to explore patterns of diversity at an unprecedented scale. The result is both a reference database giving global context to DNA sequence data and a framework for incorporating data from future studies, fostering increasingly complete characterization of Earth's microbial diversity.Peer reviewe

A communal catalogue reveals Earth’s multiscale microbial diversity

Our growing awareness of the microbial world’s importance and diversity contrasts starkly with our limited understanding of its fundamental structure. Despite recent advances in DNA sequencing, a lack of standardized protocols and common analytical frameworks impedes comparisons among studies, hindering the development of global inferences about microbial life on Earth. Here we present a meta-analysis of microbial community samples collected by hundreds of researchers for the Earth Microbiome Project. Coordinated protocols and new analytical methods, particularly the use of exact sequences instead of clustered operational taxonomic units, enable bacterial and archaeal ribosomal RNA gene sequences to be followed across multiple studies and allow us to explore patterns of diversity at an unprecedented scale. The result is both a reference database giving global context to DNA sequence data and a framework for incorporating data from future studies, fostering increasingly complete characterization of Earth’s microbial diversity

Achillesaurus manazzonei, a new alvarezsaurid theropod (Dinosauria) from the Late Cretaceous Bajo de la Carpa Formation, Río Negro Province, Argentina

Martinelli, Agustín G., Vera, Ezequiel I. (2007): Achillesaurus manazzonei, a new alvarezsaurid theropod (Dinosauria) from the Late Cretaceous Bajo de la Carpa Formation, Río Negro Province, Argentina. Zootaxa 1582 (1): 1-17, DOI: 10.11646/zootaxa.1582.1.1, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.1582.1.

Fossil woods (Coniferales) from the Baqueró Group (Aptian), Santa Cruz Province, Argentina

Two new conifer morphospecies represented by a secondary xylem are reported for the Lower Cretaceous Baqueró Group (Santa Cruz Province, Argentina). Agathoxylon sp. is characterized by poorly defined growth rings, predominantly uniseriate pitting in the radial wall of the tracheids, cross fields with 1-6 pits and uniseriate rays. These features are shared with the leafy branches described for the unit as Araucaria grandifolia Feruglio emend. Del Fueyo and Archangelsky. The second taxon, Brachyoxylon sp. cf. B. boureaui, possesses poorly defined growth rings, mixed wood with predominantly uniseriate radial pitting, cross fields with 8-26 pits and uniseriate rays. These taxa represent the first fossil woods described for Baqueroan strata

Estructuras fértiles de Marattiaceae procedentes de la Formación Cerro Negro (Aptiano), Isla Livingston (Antártida)

Estructuras fértiles de helechos eusporangiados han sido identificadas en sedimentitas eocretácicas de la Formación Cerro Negro, aflorantes en Península Byers (Isla Livingston, Islas Shetland del Sur, Antártida). Los ejemplares, preservados como permineralizaciones, comprenden sinangios aislados y asociados a pínnulas. Morfológicamente, los sinangios son lineales y bilateralmente simétricos, compuestos por dos valvas fusionadas cerca de la base. Cada una de las valvas se compone de al menos cuatro esporangios fusionados, los cuales presentan una morfología lacrimiforme en sección longitudinal, y contienen más de 400 esporas, entre las que se identificaron marcas trilete bien definidas. Estas estructuras reproductivas son comparables a las presentes en el género actual Ptisana Murdock, el cual incluye a algunas especies previamente referidas a Marattia. Además, resultan también semejantes a los sinangios preservados en improntas de frondes fértiles de la misma unidad. Este hallazgo representa una adición importante al conocimiento de las Marattiaceae, prácticamente ausentes en depósitos post-Jurásicos.Sesiones libresFacultad de Ciencias Naturales y Muse

An update of IPCC climate reference regions for subcontinental analysis of climate model data: definition and aggregated datasets

Several sets of reference regions have been used in the literature for the regional synthesis of observed and modelled climate and climate change information. A popular example is the series of reference regions used in the Intergovernmental Panel on Climate Change (IPCC) Special Report on Managing the Risks of Extreme Events and Disasters to Advance Climate Adaptation (SREX). The SREX regions were slightly modified for the Fifth Assessment Report of the IPCC and used for reporting subcontinental observed and projected changes over a reduced number (33) of climatologically consistent regions encompassing a representative number of grid boxes. These regions are intended to allow analysis of atmospheric data over broad land or ocean regions and have been used as the basis for several popular spatially aggregated datasets, such as the Seasonal Mean Temperature and Precipitation in IPCC Regions for CMIP5 dataset. We present an updated version of the reference regions for the analysis of new observed and simulated datasets (including CMIP6) which offer an opportunity for refinement due to the higher atmospheric model resolution. As a result, the number of land and ocean regions is increased to 46 and 15, respectively, better representing consistent regional climate features. The paper describes the rationale for the definition of the new regions and analyses their homogeneity. The regions are defined as polygons and are provided as coordinates and a shapefile together with companion R and Python notebooks to illustrate their use in practical problems (e.g. calculating regional averages).We also describe the generation of a new dataset with monthly temperature and precipitation, spatially aggregated in the new regions, currently for CMIP5 and CMIP6, to be extended to other datasets in the future (including observations). The use of these reference regions, dataset and code is illustrated through a worked example using scatter plots to offer guidance on the likely range of future climate change at the scale of the reference regions. The regions, datasets and code (R and Python notebooks) are freely available at the ATLAS GitHub repository: https://github.com/SantanderMetGroup/ATLAS (last access: 24 August 2020), https://doi.org/10.5281/zenodo.3998463 (Iturbide et al., 2020).This research has been supported by the Spanish National Plan for Scientific and Technical Research and Innovation (project PID2019-111481RB-I00 and María de Maeztu excellence programme projects MdM-2017-0765 and MdM-2017-0714), FCT MCTES financial support to CESAM (UIDP/50017/2020+UIDB/50017/2020), and the Basque Government BERC 2018–2021 programm