90 research outputs found

    Influence of water soluble diffusates on root initiation in woody ornamental and Vigna radiata L. cuttings

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    Treatments with aqueous diffusates from Salix species and other easy-to-root plants have promoted adventitious rooting of stem cuttings. Aqueous plant diffusates from some difficult-to-root plants have been known to contain rooting inhibitors. This study investigated the use of aqueous diffusates of both contorted willow (Salix xerythroflexuosa RAG.) and black locust (Robinia pseudoacacia L.) as sources of root promoting substances and white fringetree (Chionanthus virginicus L.) as a source of an inhibitor on woody ornamental cuttings. The effects of leaching stem cuttings in water as a pretreatment was also investigated. Aqueous diffusates of either contorted willow or black locust were tested for root promoting activity on three ornamental plants: holly (Ilex x\u27Nellie R. Stevens\u27), Chinese fringetree (Chionanthus retusus Lindl. & Paxt.) and white fringetree, and on mung bean (Vigna radiata L.) White fringetree diffusate was tested as a root inhibitor on holly. On 8 July 1996, water diffusates were prepared from fresh chopped terminal stems of either locust or willow (680 g for each species) that were steeped in 4 liters of water for 24 hours. One hundred eighty cuttings of holly, Chinese fringetree, and white fringetree were leached in running tap water (1 liter / 15 minutes) for 24 hours. All cuttings were then double wounded. Twenty cuttings of each species were then treated with either 0.0%, 0.8%, or 3.0% IBA in talc. The remaining cuttings were divided into two groups of sixty and placed in either locust or willow diffusate for 24 hours. Within these two groups, twenty cuttings of each species were treated with either 0.0%, 0.8%, or 3.0% IBA in talc. After 61 days, holly cuttings treated with 3.0% IBA produced the greatest mean number of roots but were not significantly different from those treated with locust diffusate followed by 0.8% and 3.0% IBA. After 71 days, Chinese fringetree cuttings treated with locust diffusate followed by 3.0% ffiA produced the greatest mean number of roots but were not significantly different than locust diffusate followed by 0.8% IBA. After 75 days, only one white fringetree cutting treated with locust diffusate followed by 3.0% IBA produced roots. A similar test using willow diffusate followed by 3.0% EBA on softwood cuttings of juvenile white fringetree resulted in an 80% success rate. A comparison of leached and non-leached cuttings of Chinese fringetree and white fringetree was made to determine their effects on rooting. On 9 July 1996, 60 cuttings of each species were double wounded; of these, 20 cuttings were treated with 3.0% IBA in talc; 20 cuttings received a 24 hour soak in locust diffusate followed by 3.0% IBA in talc; and 20 cuttings received a 24 hour soak in willow diffusate followed by 3.0% IBA in talc. These cuttings were compared to the water-leached cuttings in the previous experiment. After 71 days, non-leached cuttings treated with willow diffusate followed by 3.0% EBA produced the highest mean number of roots and were significantly different from all other treatments. White fringetree diffusate was prepared by placing ten fresh terminal shoots basal end down in a beaker containing 200 ml of water for 24 hours. Terminal shoots were then discarded. Twenty softwood cuttings of holly were leached in water for 24 hours, double wounded and placed basal end down in the diffusate for 24 hours. Cuttings were then treated with 3.0% IBA in talc. These holly cuttings were compared to holly cuttings treated with either a water control, or locust diffusate, or willow diffusate followed by 3.0% IB A in the first experiment. After 61 days, results showed white fringetree diffusate did not inhibit rooting, and promoted more roots than willow diffusate followed by 3.0% IBA. A mung bean bioassay was used to partially characterize and verify the effects of the diffusates. Diffusates were made from chopped frozen locust or willow terminal stems placed in water (10 g / 300 ml H2O), and stirred for 24 hours. Mung bean cuttings treated with either locust or willow diffusate (5 ml / 10 ml H2O ) plus 8 ppm IBA stimulated the production of roots more than IBA or either diffusate alone. A dose response test showed a significant increase in rooting as concentrations increased (0%, 3.3%, 16.7%, 25.0%, and 33.3%) for both diffusates. Ethyl acetate extracts of each diffusates at pH 3.0 produced more roots than extracts at pH 7.0. A thermal stability test (20 min. at 121C) of the diffusates showed locust and willow diffusates/extracts maintained most of their root promoting activity. Silica gel thin-layer chromatography of locust diffusate and pH 3.0 extract showed no detectable color spots when tested for indoles. Willow diffusate showed five detectable color bands, which were pink and rose in character, at Rf 0.05, 0.25, 0.35, 0.68, and 0.93. Willow extract pH 3.0 showed four similarly colored bands at Rf 0.24, 0.38, 0.54, and 0.73. These colors indicated the presence of indoles in the willow diffusate and the willow extract pH 3.0. Willow diffusate fraction four (Rf = 0.68) was the only band that produced significantly more roots than a water control in the mung bean bioassay. Results of this thesis support the use of easy-to-root plant diffusates followed by IBA in talc to increase rooting of moderate to difficult-to-root plants such as Chinese fringetree and white fringetree. The mung bean bioassay demonstrated root promoting substances existed in both locust and willow diffusate and their pH 3.0 ethyl acetate extracts. Both locust diffusate and locust extract pH 3.0 failed to produce color spots when tested for indoles after thin layer chromatography. Both willow diffusate and willow extract pH 3.0 tested positive for four to five indoles but these were unidentified

    Bayesian model averaging approach in health effects studies: Sensitivity analyses using PM10 and cardiopulmonary hospital admissions in Allegheny County, Pennsylvania and simulated data

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    AbstractGeneralized Additive Models (GAMs) with natural cubic splines (NS) as smoothing functions have become a standard analytical tool in time series studies of health effects of air pollution. However, standard model selection procedures ignore the model uncertainty that may lead to biased estimates, in particular those of the lagged effects. We addressed this issue by Bayesian model averaging (BMA) approach which accounts for model uncertainty by combining information from all possible models where GAMs and NS were used. Firstly, we conducted a sensitivity analysis with simulation studies for Bayesian model averaging with different calibrated hyperparameters contained in the posterior model probabilities. Our results indicated the importance of selecting the optimum degree of lagging for variables, based not only on maximizing the likelihood, but also by considering the possible effects of concurvity, consistency of degree of lagging, and biological plausibility. This was illustrated by analyses of the Allegheny County Air Pollution Study (ACAPS) where the quantity of interest was the relative risk of cardiopulmonary hospital admissions for a 20 ÎŒg/m3 increase in PM10 values for the current day. Results showed that the posterior means of the relative risk and 95% posterior probability intervals were close to each other under different choices of the prior distributions. Simulation results were consistent with these findings. It was also found that using lag variables in the model when there is only same day effect, may underestimate the relative risk attributed to the same day effect

    Novel regulators of stem cell fates identified by a multivariate phenotype screen of small compounds on human embryonic stem cell colonies

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    Understanding the complex mechanisms that govern the fate decisions of human embryonic stem cells (hESCs) is fundamental to their use in cell replacement therapies. The progress of dissecting these mechanisms will be facilitated by the availability of robust high-throughput screening assays on hESCs. In this study, we report an image-based high-content assay for detecting compounds that affect hESC survival or pluripotency. Our assay was designed to detect changes in the phenotype of hESC colonies by quantifying multiple parameters, including the number of cells in a colony, colony area and shape, intensity of nuclear staining, and the percentage of cells in the colony that express a marker of pluripotency (TRA-1-60), as well as the number of colonies per well. We used this assay to screen 1040 compounds from two commercial compound libraries, and identified 17 that promoted differentiation, as well as 5 that promoted survival of hESCs. Among the novel small compounds we identified with activity on hESC are several steroids that promote hESC differentiation and the antihypertensive drug, pinacidil, which affects hESC survival. The analysis of overlapping targets of pinacidil and the other survival compounds revealed that activity of PRK2, ROCK, MNK1, RSK1, and MSK1 kinases may contribute to the survival of hESCs. (C) 2010 Elsevier B.V. All rights reserved

    COVID-19 patients require multi-disciplinary rehabilitation approaches to address persisting symptom profiles and restore pre-COVID quality of life

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    Background Long-COVID diagnosis is prominent, and our attention must support those experiencing debilitating and long-standing symptoms. To establish patient pathways, we must consider the societal and economic impacts of sustained COVID-19. Accordingly, we sought to determine the pertinent areas impacting quality of life (QoL) following a COVID-19 infection. Research methods Three hundred and eighty-one participants completed a web-based survey (83% female, 17% male) consisting of 70 questions across 7 sections (demographics, COVID-19 symptoms; QoL; sleep quality; breathlessness; physical activity and mental health). Mean age, height, body mass and body mass index (BMI) were 42 ± 12 years, 167.6 ± 10.4 cm, 81.2 ± 22.2 kg, and 29.1 ± 8.4 kg.m2, respectively. Results Participant health was reduced because of COVID-19 symptoms (‘Good health’ to ‘Poor health’ [P < 0.001]). Survey respondents who work reported ongoing issues with performing moderate (83%) and vigorous (79%) work-related activities. Conclusions COVID-19 patients report reduced capacity to participate in activities associated with daily life, including employment activities. Bespoke COVID-19 support pathways must consider multi-disciplinary approaches that address the holistic needs of patients to restore pre-pandemic quality of life and address experienced health and wellbeing challenges

    Effect of a reduction in glomerular filtration rate after nephrectomy on arterial stiffness and central hemodynamics: rationale and design of the EARNEST study

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    Background: There is strong evidence of an association between chronic kidney disease (CKD) and cardiovascular disease. To date, however, proof that a reduction in glomerular filtration rate (GFR) is a causative factor in cardiovascular disease is lacking. Kidney donors comprise a highly screened population without risk factors such as diabetes and inflammation, which invariably confound the association between CKD and cardiovascular disease. There is strong evidence that increased arterial stiffness and left ventricular hypertrophy and fibrosis, rather than atherosclerotic disease, mediate the adverse cardiovascular effects of CKD. The expanding practice of live kidney donation provides a unique opportunity to study the cardiovascular effects of an isolated reduction in GFR in a prospective fashion. At the same time, the proposed study will address ongoing safety concerns that persist because most longitudinal outcome studies have been undertaken at single centers and compared donor cohorts with an inappropriately selected control group.&lt;p&gt;&lt;/p&gt; Hypotheses: The reduction in GFR accompanying uninephrectomy causes (1) a pressure-independent increase in aortic stiffness (aortic pulse wave velocity) and (2) an increase in peripheral and central blood pressure.&lt;p&gt;&lt;/p&gt; Methods: This is a prospective, multicenter, longitudinal, parallel group study of 440 living kidney donors and 440 healthy controls. All controls will be eligible for living kidney donation using current UK transplant criteria. Investigations will be performed at baseline and repeated at 12 months in the first instance. These include measurement of arterial stiffness using applanation tonometry to determine pulse wave velocity and pulse wave analysis, office blood pressure, 24-hour ambulatory blood pressure monitoring, and a series of biomarkers for cardiovascular and bone mineral disease.&lt;p&gt;&lt;/p&gt; Conclusions: These data will prove valuable by characterizing the direction of causality between cardiovascular and renal disease. This should help inform whether targeting reduced GFR alongside more traditional cardiovascular risk factors is warranted. In addition, this study will contribute important safety data on living kidney donors by providing a longitudinal assessment of well-validated surrogate markers of cardiovascular disease, namely, blood pressure and arterial stiffness. If any adverse effects are detected, these may be potentially reversed with the early introduction of targeted therapy. This should ensure that kidney donors do not come to long-term harm and thereby preserve the ongoing expansion of the living donor transplant program.&lt;p&gt;&lt;/p&gt

    Room Temperature Ferrimagnetism and Ferroelectricity in Strained, Thin Films of BiFe0.5Mn0.5O3.

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    Highly strained films of BiFe0.5Mn0.5O3 (BFMO) grown at very low rates by pulsed laser deposition were demonstrated to exhibit both ferrimagnetism and ferroelectricity at room temperature and above. Magnetisation measurements demonstrated ferrimagnetism (TC ∌ 600K), with a room temperature saturation moment (MS ) of up to 90 emu/cc (∌ 0.58 ÎŒB /f.u) on high quality (001) SrTiO3. X-ray magnetic circular dichroism showed that the ferrimagnetism arose from antiferromagnetically coupled Fe3+ and Mn3+. While scanning transmission electron microscope studies showed there was no long range ordering of Fe and Mn, the magnetic properties were found to be strongly dependent on the strain state in the films. The magnetism is explained to arise from one of three possible mechanisms with Bi polarization playing a key role. A signature of room temperature ferroelectricity in the films was measured by piezoresponse force microscopy and was confirmed using angular dark field scanning transmission electron microscopy. The demonstration of strain induced, high temperature multiferroism is a promising development for future spintronic and memory applications at room temperature and above.This is the final published version. It's also available from Advanced Functional Materials: http://onlinelibrary.wiley.com/doi/10.1002/adfm.201401464/full

    Healthy lifestyle interventions to combat noncommunicable disease : a novel nonhierarchical connectivity model for key stakeholders : a policy statement from the American Heart Association, European Society of Cardiology, European Association for Cardiovascular Prevention and Rehabilitation, and American College of Preventive Medicine

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    © 2015 Mayo Foundation for Medical Education and Research, and the European Society of Cardiology. This article is being published concurrently in Mayo Clinic Proceedings [1]. The articles are identical except for minor stylistic and spelling differences in keeping with each journal's style. Either citation can be used when citing this article. [1] Arena R, Guazzi M, Lianov L, Whitsel L, Berra K, Lavie CJ, Kaminsky L, Williams M, Hivert M-F, Franklin NC, Myers J, Dengel D, Lloyd-Jones DM, Pinto FJ, Cosentino F, Halle M, Gielen S, Dendale P, Niebauer J, Pelliccia A, Giannuzzi P, Corra U, Piepoli MF, Guthrie G, Shurney D. Healthy Lifestyle Interventions to Combat Noncommunicable Diseased - A Novel Nonhierarchical Connectivity Model for Key Stakeholders: A Policy Statement From the American Heart Association, European Society of Cardiology, European Association for Cardiovascular Prevention and Rehabilitation, and American College of Preventive Medicine. Mayo Clinic Proceedings 2015; DOI: 10.1016/j.mayocp.2015.05.001 [In Press]Noncommunicable diseases (NCDs) have become the primary health concern for most countries around the world. Currently, more than 36 million people worldwide die from NCDs each year, accounting for 63% of annual global deaths; most are preventable. The global financial burden of NCDs is staggering, with an estimated 2010 global cost of 6.3trillion(USdollars)thatisprojectedtoincreaseto6.3 trillion (US dollars) that is projected to increase to 13 trillion by 2030. A number of NCDs share one or more common predisposing risk factors, all related to lifestyle to some degree: (1) cigarette smoking, (2) hypertension, (3) hyperglycemia, (4) dyslipidemia, (5) obesity, (6) physical inactivity, and (7) poor nutrition. In large part, prevention, control, or even reversal of the aforementioned modifiable risk factors are realized through leading a healthy lifestyle (HL). The challenge is how to initiate the global change, not toward increasing documentation of the scope of the problem but toward true action-creating, implementing, and sustaining HL initiatives that will result in positive, measurable changes in the previously defined poor health metrics. To achieve this task, a paradigm shift in how we approach NCD prevention and treatment is required. The goal of this American Heart Association/European Society of Cardiology/European Association for Cardiovascular Prevention and Rehabilitation/American College of Preventive Medicine policy statement is to define key stakeholders and highlight their connectivity with respect to HL initiatives. This policy encourages integrated action by all stakeholders to create the needed paradigm shift and achieve broad adoption of HL behaviors on a global scale.info:eu-repo/semantics/publishedVersio

    One-Year Analysis of the Prospective Multicenter SENTRY Clinical Trial: Safety and Effectiveness of the Novate Sentry Bioconvertible Inferior Vena Cava Filter

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    Purpose To prospectively assess the Sentry bioconvertible inferior vena cava (IVC) filter in patients requiring temporary protection against pulmonary embolism (PE). Materials and Methods At 23 sites, 129 patients with documented deep vein thrombosis (DVT) or PE, or at temporary risk of developing DVT or PE, unable to use anticoagulation were enrolled. The primary end point was clinical success, including successful filter deployment, freedom from new symptomatic PE through 60 days before filter bioconversion, and 6-month freedom from filter-related complications. Patients were monitored by means of radiography, computerized tomography (CT), and CT venography to assess filtering configuration through 60 days, filter bioconversion, and incidence of PE and filter-related complications through 12 months. Results Clinical success was achieved in 111 of 114 evaluable patients (97.4%, 95% confidence interval [CI] 92.5%–99.1%). The rate of freedom from new symptomatic PE through 60 days was 100% (n = 129, 95% CI 97.1%–100.0%), and there were no cases of PE through 12 months for either therapeutic or prophylactic indications. Two patients (1.6%) developed symptomatic caval thrombosis during the first month; neither experienced recurrence after successful interventions. There was no filter tilting, migration, embolization, fracture, or caval perforation by the filter, and no filter-related death through 12 months. Filter bioconversion was successful for 95.7% (110/115) at 6 months and for 96.4% (106/110) at 12 months. Conclusions The Sentry IVC filter provided safe and effective protection against PE, with a high rate of intended bioconversion and a low rate of device-related complications, through 12 months of imaging-intense follow-up

    A chemical survey of exoplanets with ARIEL

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    Thousands of exoplanets have now been discovered with a huge range of masses, sizes and orbits: from rocky Earth-like planets to large gas giants grazing the surface of their host star. However, the essential nature of these exoplanets remains largely mysterious: there is no known, discernible pattern linking the presence, size, or orbital parameters of a planet to the nature of its parent star. We have little idea whether the chemistry of a planet is linked to its formation environment, or whether the type of host star drives the physics and chemistry of the planet’s birth, and evolution. ARIEL was conceived to observe a large number (~1000) of transiting planets for statistical understanding, including gas giants, Neptunes, super-Earths and Earth-size planets around a range of host star types using transit spectroscopy in the 1.25–7.8 ÎŒm spectral range and multiple narrow-band photometry in the optical. ARIEL will focus on warm and hot planets to take advantage of their well-mixed atmospheres which should show minimal condensation and sequestration of high-Z materials compared to their colder Solar System siblings. Said warm and hot atmospheres are expected to be more representative of the planetary bulk composition. Observations of these warm/hot exoplanets, and in particular of their elemental composition (especially C, O, N, S, Si), will allow the understanding of the early stages of planetary and atmospheric formation during the nebular phase and the following few million years. ARIEL will thus provide a representative picture of the chemical nature of the exoplanets and relate this directly to the type and chemical environment of the host star. ARIEL is designed as a dedicated survey mission for combined-light spectroscopy, capable of observing a large and well-defined planet sample within its 4-year mission lifetime. Transit, eclipse and phase-curve spectroscopy methods, whereby the signal from the star and planet are differentiated using knowledge of the planetary ephemerides, allow us to measure atmospheric signals from the planet at levels of 10–100 part per million (ppm) relative to the star and, given the bright nature of targets, also allows more sophisticated techniques, such as eclipse mapping, to give a deeper insight into the nature of the atmosphere. These types of observations require a stable payload and satellite platform with broad, instantaneous wavelength coverage to detect many molecular species, probe the thermal structure, identify clouds and monitor the stellar activity. The wavelength range proposed covers all the expected major atmospheric gases from e.g. H2O, CO2, CH4 NH3, HCN, H2S through to the more exotic metallic compounds, such as TiO, VO, and condensed species. Simulations of ARIEL performance in conducting exoplanet surveys have been performed – using conservative estimates of mission performance and a full model of all significant noise sources in the measurement – using a list of potential ARIEL targets that incorporates the latest available exoplanet statistics. The conclusion at the end of the Phase A study, is that ARIEL – in line with the stated mission objectives – will be able to observe about 1000 exoplanets depending on the details of the adopted survey strategy, thus confirming the feasibility of the main science objectives.Peer reviewedFinal Published versio

    The landscape of somatic copy-number alteration across human cancers

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    available in PMC 2010 August 18.A powerful way to discover key genes with causal roles in oncogenesis is to identify genomic regions that undergo frequent alteration in human cancers. Here we present high-resolution analyses of somatic copy-number alterations (SCNAs) from 3,131 cancer specimens, belonging largely to 26 histological types. We identify 158 regions of focal SCNA that are altered at significant frequency across several cancer types, of which 122 cannot be explained by the presence of a known cancer target gene located within these regions. Several gene families are enriched among these regions of focal SCNA, including the BCL2 family of apoptosis regulators and the NF-ÎșΒ pathway. We show that cancer cells containing amplifications surrounding the MCL1 and BCL2L1 anti-apoptotic genes depend on the expression of these genes for survival. Finally, we demonstrate that a large majority of SCNAs identified in individual cancer types are present in several cancer types.National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, P50CA90578)National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, R01CA109038))National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, R01CA109467)National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, P01CA085859)National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, P01CA 098101)National Institutes of Health (U.S.) (Dana-Farber/Harvard Cancer Center and Pacific Northwest Prostate Cancer SPOREs, K08CA122833
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