702 research outputs found
Role of mTOR through Autophagy in Esophageal Cancer Stemness
SIMPLE SUMMARY: Esophageal cancer (EC) is a highly aggressive disease with a poor prognosis, which seems related to esophageal cancer stem-like cells (CSCs), which reside in a hypoxic niche. We demonstrated, using EC cell lines and patient-derived organoids, that the hypoxia-responding mammalian target of rapamycin (mTOR) can suppress autophagy and stemness of esophageal CSCs. In addition, mTOR inhibitor Torin-1-mediated CSCs upregulation was significantly reduced in cells treated with autophagy inhibitor, hydroxychloroquine (HCQ). Collectively, our data suggest that autophagy may play a crucial role in mTOR-mediated CSCs repression. The mTOR pathway could be a novel therapeutic target for putative esophageal CSCs. ABSTRACT: Esophageal cancer (EC) is a highly aggressive disease with a poor prognosis. Therapy resistance and early recurrences are major obstacles in reaching a better outcome. Esophageal cancer stem-like cells (CSCs) seem tightly related with chemoradiation resistance, initiating new tumors and metastases. Several oncogenic pathways seem to be involved in the regulation of esophageal CSCs and might harbor novel therapeutic targets to eliminate CSCs. Previously, we identified a subpopulation of EC cells that express high levels of CD44 and low levels of CD24 (CD44(+)/CD24(â)), show CSC characteristics and reside in hypoxic niches. Here, we aim to clarify the role of the hypoxia-responding mammalian target of the rapamycin (mTOR) pathway in esophageal CSCs. We showed that under a low-oxygen culture condition and nutrient deprivation, the CD44(+)/CD24(â) population is enriched. Since both low oxygen and nutrient deprivation may inhibit the mTOR pathway, we next chemically inhibited the mTOR pathway using Torin-1. Torin-1 upregulated SOX2 resulted in an enrichment of the CD44(+)/CD24(â) population and increased sphere formation potential. In contrast, stimulation of the mTOR pathway using MHY1485 induced the opposite effects. In addition, Torin-1 increased autophagic activity, while MHY1485 suppressed autophagy. Torin-1-mediated CSCs upregulation was significantly reduced in cells treated with autophagy inhibitor, hydroxychloroquine (HCQ). Finally, a clearly defined CD44(+)/CD24(â) CSC population was detected in EC patients-derived organoids (ec-PDOs) and here, MHY1485 also reduced this population. These data suggest that autophagy may play a crucial role in mTOR-mediated CSCs repression. Stimulation of the mTOR pathway might aid in the elimination of putative esophageal CSCs
Thickness Estimation of Epitaxial Graphene on SiC using Attenuation of Substrate Raman Intensity
A simple, non-invasive method using Raman spectroscopy for the estimation of
the thickness of graphene layers grown epitaxially on silicon carbide (SiC) is
presented, enabling simultaneous determination of thickness, grain size and
disorder using the spectra. The attenuation of the substrate Raman signal due
to the graphene overlayer is found to be dependent on the graphene film
thickness deduced from X-ray photoelectron spectroscopy and transmission
electron microscopy of the surfaces. We explain this dependence using an
absorbing overlayer model. This method can be used for mapping graphene
thickness over a region and is capable of estimating thickness of multilayer
graphene films beyond that possible by XPS and Auger electron spectroscopy
(AES).Comment: 14 pages, 9 figure
Layered topological semimetal GaGeTe: New polytype with non-centrosymmetric structure
[EN]
GaGeTe is a layered van der Waals material composed of germanene and GaTe sublayers that has been recently predicted to be a basic Z2 topological semimetal. To date, only one polytype of GaGeTe is known with trigonal centrosymmetric structure (a phase, space group R-3m, No. 166). Here we show that asgrown samples of GaGeTe show traces of at least another polytype with hexagonal noncentrosymmetric structure (f3 phase, space group P63mc, No. 186). Moreover, we suggest that another bulk hexagonal polytype (g phase, space group P-3m1, No. 164) could also be found near room conditions. Both a and f3 polytypes have been identified and characterized by means of X-ray diffraction and Raman scattering measurements with the support of ab initio calculations. We provide the vibrational properties of both polytypes and show that the Raman spectrum reported for GaGeTe almost forty years ago and attributed to the a phase, was, in fact, that of the secondary f3 phase. Additionally, we show that a Fermi resonance occurs in a-GaGeTe under non-resonant excitation conditions, but not under resonant excitation conditions. Theoretical calculations show that bulk f3-GaGeTe is a non-centrosymmetric weak topological semimetal with even smaller lattice thermal conductivity than centrosymmetric bulk aGaGeTe. In perspective, our work paves the way for the control and engineering of GaGeTe polytypes to design and implement complex van der Waals heterostructures formed by a combination of centrosymmetric and non-centrosymmetric layers of up to three different polytypes in a single material, suitable for a number of fundamental studies and technological applications.This publication is part of the project MALTA Consolider Team network (RED2018-102612-T) , financed by MINECO/AEI/10.13039/501100003329; by I ? D ? i projects PID2019-106383 GB -41/42/43 financed by MCIN/AEI/10.13039/501100011033; and by project PROMETEO/2018/123 (EFIMAT) financed by Generalitat Valenciana. E.B. would like to thank the Universitat Politecnica de Valencia for his postdoctoral contract (Ref. PAID -10-21) . AHR was supported by the U.S. Department of Energy (DOE) , Office of Science, Basic Energy Sciences under award DE-SC0021375. We also acknowledge the computational resources awarded by XSEDE, a project supported by National Science Foundation grant number ACI-1053575. The authors also acknowledge the support from the Texas Advances Computer Center (with the Stampede2 and Bridges supercom- puters) . E.L.d.S would like to acknowledge the Network of Extreme Conditions Laboratories (NECL) , financed by FCT and co -financed by NORTE 2020, through the program Portugal 2020 and FEDER; the High Performance Computing Chair-a R & D infrastructure (based at the University of ? Evora; PI: M. Avillez) ; and for the computational support provided by the HPC center OBLIVION -U. ? Evora to perform the lattice thermal conductivity calculations. A.L. and D.E. would like to thank the Generalitat Valenciana for the Ph.D. Fellowship no. GRISOLIAP/2019/025.Gallego-Parra, S.; Bandiello, E.; Liang, A.; Da Silva, EL.; Rodriguez-Hernandez, P.; Muñoz, A.; Radescu, S.... (2022). Layered topological semimetal GaGeTe: New polytype with non-centrosymmetric structure. Materials Today Advances. 16:1-16. https://doi.org/10.1016/j.mtadv.2022.1003091161
Empty singularities in higher-dimensional Gravity
We study the exact solution of Einstein's field equations consisting of a
()-dimensional static and hyperplane symmetric thick slice of matter, with
constant and positive energy density and thickness , surrounded by
two different vacua. We explicitly write down the pressure and the external
gravitational fields in terms of and , the pressure is positive and
bounded, presenting a maximum at an asymmetrical position. And if
is small enough, the dominant energy condition is satisfied
all over the spacetime. We find that this solution presents many interesting
features. In particular, it has an empty singular boundary in one of the vacua.Comment: 13 page
Radiative open charm decay of the Y(3940), Z(3930), X(4160) resonances
We determine the radiative decay amplitudes for decay into and , or and of some of the charmonium like
states classified as X,Y,Z resonances, plus some other hidden charm states
which are dynamically generated from the interaction of vector mesons with
charm. The mass distributions as a function of the or
invariant mass show a peculiar behavior as a consequence of
the nature of these states. The experimental search of these
magnitudes can shed light on the nature of these states.Comment: 18 pages, 9 figure
Multiorder coherent Raman scattering of a quantum probe field
We study the multiorder coherent Raman scattering of a quantum probe field in
a far-off-resonance medium with a prepared coherence. Under the conditions of
negligible dispersion and limited bandwidth, we derive a Bessel-function
solution for the sideband field operators. We analytically and numerically
calculate various quantum statistical characteristics of the sideband fields.
We show that the multiorder coherent Raman process can replicate the
statistical properties of a single-mode quantum probe field into a broad comb
of generated Raman sidebands. We also study the mixing and modulation of photon
statistical properties in the case of two-mode input. We show that the prepared
Raman coherence and the medium length can be used as control parameters to
switch a sideband field from one type of photon statistics to another type, or
from a non-squeezed state to a squeezed state and vice versa.Comment: 12 pages, 7 figures, to be published in Phys. Rev.
Does accelerating universe indicates Brans-Dicke theory
The evolution of universe in Brans-Dicke (BD) theory is discussed in this
paper.
Considering a parameterized scenario for BD scalar field
which plays the role of gravitational "constant" ,
we apply the Markov Chain Monte Carlo method to investigate a global
constraints on BD theory with a self-interacting potential according to the
current observational data: Union2 dataset of type supernovae Ia (SNIa),
high-redshift Gamma-Ray Bursts (GRBs) data, observational Hubble data (OHD),
the cluster X-ray gas mass fraction, the baryon acoustic oscillation (BAO), and
the cosmic microwave background (CMB) data. It is shown that an expanded
universe from deceleration to acceleration is given in this theory, and the
constraint results of dimensionless matter density and parameter
are, and
which is consistent with the
result of current experiment exploration, . In
addition, we use the geometrical diagnostic method, jerk parameter , to
distinguish the BD theory and cosmological constant model in Einstein's theory
of general relativity.Comment: 16 pages, 3 figure
An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics
For a decade, The Cancer Genome Atlas (TCGA) program collected clinicopathologic annotation data along with multi-platform molecular profiles of more than 11,000 human tumors across 33 different cancer types. TCGA clinical data contain key features representing the democratized nature of the data collection process. To ensure proper use of this large clinical dataset associated with genomic features, we developed a standardized dataset named the TCGA Pan-Cancer Clinical Data Resource (TCGA-CDR), which includes four major clinical outcome endpoints. In addition to detailing major challenges and statistical limitations encountered during the effort of integrating the acquired clinical data, we present a summary that includes endpoint usage recommendations for each cancer type. These TCGA-CDR findings appear to be consistent with cancer genomics studies independent of the TCGA effort and provide opportunities for investigating cancer biology using clinical correlates at an unprecedented scale. Analysis of clinicopathologic annotations for over 11,000 cancer patients in the TCGA program leads to the generation of TCGA Clinical Data Resource, which provides recommendations of clinical outcome endpoint usage for 33 cancer types
Search for a W' boson decaying to a bottom quark and a top quark in pp collisions at sqrt(s) = 7 TeV
Results are presented from a search for a W' boson using a dataset
corresponding to 5.0 inverse femtobarns of integrated luminosity collected
during 2011 by the CMS experiment at the LHC in pp collisions at sqrt(s)=7 TeV.
The W' boson is modeled as a heavy W boson, but different scenarios for the
couplings to fermions are considered, involving both left-handed and
right-handed chiral projections of the fermions, as well as an arbitrary
mixture of the two. The search is performed in the decay channel W' to t b,
leading to a final state signature with a single lepton (e, mu), missing
transverse energy, and jets, at least one of which is tagged as a b-jet. A W'
boson that couples to fermions with the same coupling constant as the W, but to
the right-handed rather than left-handed chiral projections, is excluded for
masses below 1.85 TeV at the 95% confidence level. For the first time using LHC
data, constraints on the W' gauge coupling for a set of left- and right-handed
coupling combinations have been placed. These results represent a significant
improvement over previously published limits.Comment: Submitted to Physics Letters B. Replaced with version publishe
Search for the standard model Higgs boson decaying into two photons in pp collisions at sqrt(s)=7 TeV
A search for a Higgs boson decaying into two photons is described. The
analysis is performed using a dataset recorded by the CMS experiment at the LHC
from pp collisions at a centre-of-mass energy of 7 TeV, which corresponds to an
integrated luminosity of 4.8 inverse femtobarns. Limits are set on the cross
section of the standard model Higgs boson decaying to two photons. The expected
exclusion limit at 95% confidence level is between 1.4 and 2.4 times the
standard model cross section in the mass range between 110 and 150 GeV. The
analysis of the data excludes, at 95% confidence level, the standard model
Higgs boson decaying into two photons in the mass range 128 to 132 GeV. The
largest excess of events above the expected standard model background is
observed for a Higgs boson mass hypothesis of 124 GeV with a local significance
of 3.1 sigma. The global significance of observing an excess with a local
significance greater than 3.1 sigma anywhere in the search range 110-150 GeV is
estimated to be 1.8 sigma. More data are required to ascertain the origin of
this excess.Comment: Submitted to Physics Letters
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