On Sampling Strategies for Neural Network-based Collaborative Filtering

Recent advances in neural networks have inspired people to design hybrid recommendation algorithms that can incorporate both (1) user-item interaction information and (2) content information including image, audio, and text. Despite their promising results, neural network-based recommendation algorithms pose extensive computational costs, making it challenging to scale and improve upon. In this paper, we propose a general neural network-based recommendation framework, which subsumes several existing state-of-the-art recommendation algorithms, and address the efficiency issue by investigating sampling strategies in the stochastic gradient descent training for the framework. We tackle this issue by first establishing a connection between the loss functions and the user-item interaction bipartite graph, where the loss function terms are defined on links while major computation burdens are located at nodes. We call this type of loss functions "graph-based" loss functions, for which varied mini-batch sampling strategies can have different computational costs. Based on the insight, three novel sampling strategies are proposed, which can significantly improve the training efficiency of the proposed framework (up to $\times 30$ times speedup in our experiments), as well as improving the recommendation performance. Theoretical analysis is also provided for both the computational cost and the convergence. We believe the study of sampling strategies have further implications on general graph-based loss functions, and would also enable more research under the neural network-based recommendation framework.Comment: This is a longer version (with supplementary attached) of the KDD'17 pape

Hybrid Models with Deep and Invertible Features

We propose a neural hybrid model consisting of a linear model defined on a set of features computed by a deep, invertible transformation (i.e. a normalizing flow). An attractive property of our model is that both p(features), the density of the features, and p(targets | features), the predictive distribution, can be computed exactly in a single feed-forward pass. We show that our hybrid model, despite the invertibility constraints, achieves similar accuracy to purely predictive models. Moreover the generative component remains a good model of the input features despite the hybrid optimization objective. This offers additional capabilities such as detection of out-of-distribution inputs and enabling semi-supervised learning. The availability of the exact joint density p(targets, features) also allows us to compute many quantities readily, making our hybrid model a useful building block for downstream applications of probabilistic deep learning.Comment: ICML 201

Machine Learning and Integrative Analysis of Biomedical Big Data.

Recent developments in high-throughput technologies have accelerated the accumulation of massive amounts of omics data from multiple sources: genome, epigenome, transcriptome, proteome, metabolome, etc. Traditionally, data from each source (e.g., genome) is analyzed in isolation using statistical and machine learning (ML) methods. Integrative analysis of multi-omics and clinical data is key to new biomedical discoveries and advancements in precision medicine. However, data integration poses new computational challenges as well as exacerbates the ones associated with single-omics studies. Specialized computational approaches are required to effectively and efficiently perform integrative analysis of biomedical data acquired from diverse modalities. In this review, we discuss state-of-the-art ML-based approaches for tackling five specific computational challenges associated with integrative analysis: curse of dimensionality, data heterogeneity, missing data, class imbalance and scalability issues

Identification of Chimera using Machine Learning

Chimera state refers to coexistence of coherent and non-coherent phases in identically coupled dynamical units found in various complex dynamical systems. Identification of Chimera, on one hand is essential due to its applicability in various areas including neuroscience, and on other hand is challenging due to its widely varied appearance in different systems and the peculiar nature of its profile. Therefore, a simple yet universal method for its identification remains an open problem. Here, we present a very distinctive approach using machine learning techniques to characterize different dynamical phases and identify the chimera state from given spatial profiles generated using various different models. The experimental results show that the performance of the classification algorithms varies for different dynamical models. The machine learning algorithms, namely random forest, oblique random forest based on tikhonov, parallel-axis split and null space regularization achieved more than $96\%$ accuracy for the Kuramoto model. For the logistic-maps, random forest and tikhonov regularization based oblique random forest showed more than $90\%$ accuracy, and for the H\'enon-Map model, random forest, null-space and axis-parallel split regularization based oblique random forest achieved more than $80\%$ accuracy. The oblique random forest with null space regularization achieved consistent performance (more than $83\%$ accuracy) across different dynamical models while the auto-encoder based random vector functional link neural network showed relatively lower performance. This work provides a direction for employing machine learning techniques to identify dynamical patterns arising in coupled non-linear units on large-scale, and for characterizing complex spatio-temporal patterns in real-world systems for various applications.Comment: 20 Pages, 4 Figures; Comments welcom

Metaheuristic design of feedforward neural networks: a review of two decades of research

Over the past two decades, the feedforward neural network (FNN) optimization has been a key interest among the researchers and practitioners of multiple disciplines. The FNN optimization is often viewed from the various perspectives: the optimization of weights, network architecture, activation nodes, learning parameters, learning environment, etc. Researchers adopted such different viewpoints mainly to improve the FNN's generalization ability. The gradient-descent algorithm such as backpropagation has been widely applied to optimize the FNNs. Its success is evident from the FNN's application to numerous real-world problems. However, due to the limitations of the gradient-based optimization methods, the metaheuristic algorithms including the evolutionary algorithms, swarm intelligence, etc., are still being widely explored by the researchers aiming to obtain generalized FNN for a given problem. This article attempts to summarize a broad spectrum of FNN optimization methodologies including conventional and metaheuristic approaches. This article also tries to connect various research directions emerged out of the FNN optimization practices, such as evolving neural network (NN), cooperative coevolution NN, complex-valued NN, deep learning, extreme learning machine, quantum NN, etc. Additionally, it provides interesting research challenges for future research to cope-up with the present information processing era