Aurora-A kinase is differentially expressed in the nucleus and cytoplasm in normal Müllerian epithelium and benign, borderline and malignant serous ovarian neoplasms

BACKGROUND: Aurora-A kinase is important for cellular proliferation and is implicated in the tumorigenesis of several malignancies, including of the ovary. Information regarding the expression patterns of Aurora-A in normal Müllerian epithelium as well as benign, borderline and malignant epithelial ovarian neoplasms is limited. METHODS: We investigated Aurora-A expression by immunohistochemistry in 15 benign, 19 borderline and 17 malignant ovarian serous tumors, and 16 benign, 8 borderline, and 2 malignant ovarian mucinous tumors. Twelve fimbriae from seven patients served as normal Müllerian epithelium controls. We also examined Aurora-A protein expression by western blot in normal fimbriae and tumor specimens. RESULTS: All normal fimbriae (n = 12) showed nuclear but not cytoplasmic Aurora-A immunoreactivity by immunohistochemistry. Benign ovarian tumors also showed strong nuclear Aurora-A immunoreactivity. Forty-eight percent (13/27) of borderline tumors demonstrated nuclear Aurora-A immunoreactivity, while the remainder (52%, 14/27) lacked Aurora-A staining. Nuclear Aurora-A immunoreactivity was absent in all malignant serous tumors, however, 47% (8/17) demonstrated perinuclear cytoplasmic staining. These results were statistically significant when tumor class (benign/borderline/malignant) was compared to immunoreactivity localization or intensity (Fisher Exact Test, p \u3c 0.01). Western blot analysis confirmed the greater nuclear Aurora-A expression in control Müllerian epithelium compared to borderline and malignant tumors. CONCLUSION: Aurora-A kinase is differentially expressed across normal Müllerian epithelium, benign and borderline serous and mucinous ovarian epithelial neoplasms and malignant serous ovarian tumors., with nuclear expression of unphosphorylated Aurora-A being present in normal and benign neoplastic epithelium, and lost in malignant serous neoplasms. Further studies of the possible biological and clinical implications of the loss of nuclear Aurora-A expression in ovarian tumors, and its role in ovarian carcinogenesis are warranted

Variation of Bar Strength with Central Velocity Dispersion in Spiral Galaxies

We investigate the variation of bar strength with central velocity dispersion in a sample of barred spiral galaxies. The bar strength is characterized by $Q_g$, the maximal tangential perturbation associated with the bar, normalized by the mean axisymmetric force. It is derived from the galaxy potentials which are obtained using near-infrared images of the galaxies. However, $Q_g$ is sensitive to bulge mass. Hence we also estimated bar strengths from the relative Fourier intensity amplitude ($A_{2}$) of bars in near-infrared images. The central velocity dispersions were obtained from integral field spectroscopy observations of the velocity fields in the centers of these galaxies; it was normalized by the rotation curve amplitude obtained from HI line width for each galaxy. We found a correlation between bar strengths (both $Q_g$ and $A_{2}$) and the normalized central velocity dispersions in our sample. This suggests that bars weaken as their central components become kinematically hotter. This may have important implications for the secular evolution of barred galaxies.Comment: To appear in Ap&S

d-wave superconductivity near charge instabilities

We investigate the symmetry of the superconducting order parameter in the proximity of a phase-separation or of an incommensurate charge-density-wave instability. The attractive effective interaction at small or intermediate transferred momenta is singular near the instability. This strongly $q$-dependent interaction, together with a residual local repulsion between the quasiparticles and an enhanced density of states for band structures appropriate for the high temperature superconducting oxides, strongly favors the formation of $d$-wave superconductivity. The relative stability with respect to superconductivity in the $s$-wave channel is discussed in detail, finding this latter hardly realized in the above conditions. The superconducting temperature is mostly determined by the closeness to the quantum critical point associated to the charge instability and displays a stronger dependence on doping with respect to the simple proximity to a Van Hove singularity. The relevance of this scenario and the generic agreement of the resulting phase diagram with the properties displayed by high temperature superconducting oxides is discussed.Comment: 1 revtex file and 12 postscript figure

Hero or anti-hero?: Narratives of newswork and journalistic identity construction in complex digital megastories

Exploring constructions of journalistic identity in a digital age has been a lively area of scholarship as the field of digital journalism studies has grown (Franklin 2013, 2014; Steensen and Ahva 2015). Yet despite many approaches to understanding digital change, key avenues for understanding changing constructions of identity remain underexplored. This paper addresses a conceptual void in research literature by employing semiotic and semantic approaches to analyse performances of journalistic identity in narratives of newswork facilitated by and focused on digital megaleaks. It seeks to aid understanding of the way narratives describe changing practices of newsgathering, and how journalists position themselves within these hybrid traditional/digital stories. Findings show news narratives reinforce the primacy of journalists within traditional boundaries of a journalistic field, and articulate a preferred imagination of journalistic identity. Methodologically, this paper shows how semantic and semiotic approaches lend themselves to studying narratives of newswork within journalistic metadiscourses to understand journalistic identity at the nexus of traditional and digital dynamics. The resultant portrait of journalistic identity channels a sociohistoric, romantic notion of the journalist as “the shadowy figure always to be found on the edges of the century’s great events” (Inglis 2002, xi), updated to accommodate modern, digital dynamics

Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat

To investigate the extent of genetic stratification in structured microbial communities, we compared the metagenomes of 10 successive layers of a phylogenetically complex hypersaline mat from Guerrero Negro, Mexico. We found pronounced millimeter-scale genetic gradients that were consistent with the physicochemical profile of the mat. Despite these gradients, all layers displayed near-identical and acid-shifted isoelectric point profiles due to a molecular convergence of amino-acid usage, indicating that hypersalinity enforces an overriding selective pressure on the mat community

Evolution of the resonance and incommensurate spin fluctuations in superconducting YBa2_2Cu3_3O6+x_{6+x}

Polarized and unpolarized neutron triple-axis spectrometry was used to study the dynamical magnetic susceptibility $\chi^{\prime\prime}({\bf q},\omega)$ as a function of energy ($\hbar\omega$) and wave vector (${\bf q}$) in a wide temperature range for the bilayer superconductor YBa$_2$Cu$_3$O$_{6+x}$ with oxygen concentrations, $x$, of 0.45, 0.5, 0.6, 0.7, 0.8, 0.93, and 0.95. The most prominent features in the magnetic spectra include a spin gap in the superconducting state, a pseudogap in the normal state, the much-discussed resonance, and incommensurate spin fluctuations below the resonance. We establish the doping dependence of the spin gap in the superconducting state, the resonance energy, and the incommensurability of the spin fluctuations. We discuss in detail the procedure used for separating the magnetic scattering from phonon and other spurious effects. In the comparison of our experimental results with various microscopic theoretical models, particular emphasis was made to address the similarities and differences in the spin fluctuations of YBa$_2$Cu$_3$O$_{6+x}$ and La$_{2-x}$Sr$_x$CuO$_4$.Comment: 23 pages with 30 figures, Phys. Rev. B (in press). If necessary, contact me for higher resolution figure

Interpreting systematic reviews: are we ready to make our own conclusions? A cross-sectional study

<p>Abstract</p> <p>Background</p> <p>Independent evaluation of clinical evidence is advocated in evidence-based medicine (EBM). However, authors' conclusions are often appealing for readers who look for quick messages. We assessed how well a group of Malaysian hospital practitioners and medical students derived their own conclusions from systematic reviews (SRs) and to what extent these were influenced by their prior beliefs and the direction of the study results.</p> <p>Methods</p> <p>We conducted two cross-sectional studies: one with hospital practitioners (<it>n </it>= 150) attending an EBM course in June 2008 in a tertiary hospital and one with final-year medical students (<it>n </it>= 35) in November 2008. We showed our participants four Cochrane SR abstracts without the authors' conclusions. For each article, the participants chose a conclusion from among six options comprising different combinations of the direction of effect and the strength of the evidence. We predetermined the single option that best reflected the actual authors' conclusions and labelled this as our best conclusion. We compared the participants' choices with our predetermined best conclusions. Two chosen reviews demonstrated that the intervention was beneficial ("positive"), and two others did not ("negative"). We also asked the participants their prior beliefs about the intervention.</p> <p>Results</p> <p>Overall, 60.3% correctly identified the direction of effect, and 30.1% chose the best conclusions, having identified both the direction of effect and the strength of evidence. More students (48.2%) than practitioners (22.2%) chose the best conclusions (<it>P </it>< 0.001). Fewer than one-half (47%) correctly identified the direction of effect against their prior beliefs. "Positive" SRs were more likely than "negative" SRs to change the participants' beliefs about the effect of the intervention (relative risk (RR) 1.8, 95% confidence interval 1.3 to 2.6) and "convert" those who were previously unsure by making them choose the appropriate direction of effect (RR 1.9, 95% confidence interval 1.3 to 2.8).</p> <p>Conclusions</p> <p>The majority of our participants could not generate appropriate conclusions from SRs independently. Judicious direction from the authors' conclusions still appears crucial to guiding our health care practitioners in identifying appropriate messages from research. Authors, editors and reviewers should ensure that the conclusions of a paper accurately reflect the results. Similar studies should be conducted in other settings where awareness and application of EBM are different.</p> <p>Please see Commentary: <url>http://www.biomedcentral.com/1741-7015/9/31/</url>.</p

Abundance and Distribution of Enteric Bacteria and Viruses in Coastal and Estuarine Sediments—a Review

The long term survival of fecal indicator organisms (FIOs) and human pathogenic microorganisms in sediments is important from a water quality, human health and ecological perspective. Typically, both bacteria and viruses strongly associate with particulate matter present in freshwater, estuarine and marine environments. This association tends to be stronger in finer textured sediments and is strongly influenced by the type and quantity of clay minerals and organic matter present. Binding to particle surfaces promotes the persistence of bacteria in the environment by offering physical and chemical protection from biotic and abiotic stresses. How bacterial and viral viability and pathogenicity is influenced by surface attachment requires further study. Typically, long-term association with surfaces including sediments induces bacteria to enter a viable-but-non-culturable (VBNC) state. Inherent methodological challenges of quantifying VBNC bacteria may lead to the frequent under-reporting of their abundance in sediments. The implications of this in a quantitative risk assessment context remain unclear. Similarly, sediments can harbor significant amounts of enteric viruses, however, the factors regulating their persistence remains poorly understood. Quantification of viruses in sediment remains problematic due to our poor ability to recover intact viral particles from sediment surfaces (typically <10%), our inability to distinguish between infective and damaged (non-infective) viral particles, aggregation of viral particles, and inhibition during qPCR. This suggests that the true viral titre in sediments may be being vastly underestimated. In turn, this is limiting our ability to understand the fate and transport of viruses in sediments. Model systems (e.g., human cell culture) are also lacking for some key viruses, preventing our ability to evaluate the infectivity of viruses recovered from sediments (e.g., norovirus). The release of particle-bound bacteria and viruses into the water column during sediment resuspension also represents a risk to water quality. In conclusion, our poor process level understanding of viral/bacterial-sediment interactions combined with methodological challenges is limiting the accurate source apportionment and quantitative microbial risk assessment for pathogenic organisms associated with sediments in aquatic environments